Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4185

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
5,001,474	+				-0.1
5,001,475	-				+0.2
5,001,479	-				-0.6
5,001,482	-				+1.5
5,001,482	-				-0.9
5,001,503	+				+1.1
5,001,518	+				-0.2
5,001,519	-				+0.5
5,001,519	-				-1.2
5,001,524	-				+1.1
5,001,528	-				-0.2
5,001,528	-				-0.9
5,001,540	+				+0.6
5,001,541	-				+0.0
5,001,541	-				+0.3
5,001,541	-				+0.5
5,001,615	+				-1.3
5,001,666	+				+1.9
5,001,666	+				+0.4
5,001,701	+				+0.0
5,001,796	+				+0.1
5,001,797	-				+0.8
5,001,829	+				-0.1
5,001,829	+				-0.2
5,001,852	-				-0.2
5,001,888	-				-0.3
5,001,888	-				+1.7
5,001,896	-				+0.6
5,001,896	-				-0.2
5,001,896	-				+0.3
5,001,896	-				+0.9
5,001,898	-				+0.6
5,001,929	-				+0.2
5,002,066	-		Echvi_4184	0.26	-0.8
5,002,078	+		Echvi_4184	0.30	+1.3
5,002,078	+		Echvi_4184	0.30	-1.1
5,002,125	+		Echvi_4184	0.45	+1.1
5,002,126	-		Echvi_4184	0.45	+0.1
5,002,171	-		Echvi_4184	0.59	-1.1
5,002,210	-		Echvi_4184	0.71	-1.1
5,002,210	-		Echvi_4184	0.71	+0.9
5,002,210	-		Echvi_4184	0.71	-0.3
5,002,234	-		Echvi_4184	0.79	-0.8
5,002,234	-		Echvi_4184	0.79	+0.1
5,002,234	-		Echvi_4184	0.79	+0.0
5,002,234	-		Echvi_4184	0.79	+1.6
5,002,264	+		Echvi_4184	0.88	-0.1
5,002,331	+				-0.4
5,002,333	+				+0.5
5,002,333	+				-0.1
5,002,334	-				+0.1
5,002,364	+				-1.7
5,002,365	-				-0.2
5,002,381	+				-1.3
5,002,382	-				-0.6
5,002,386	+				-1.2
5,002,387	-				-1.4
5,002,429	-		Echvi_4185	0.10	+0.5
5,002,450	+		Echvi_4185	0.12	-0.9
5,002,450	+		Echvi_4185	0.12	+0.7
5,002,463	+		Echvi_4185	0.13	-0.6
5,002,463	+		Echvi_4185	0.13	+0.3
5,002,464	-		Echvi_4185	0.13	+0.4
5,002,476	-		Echvi_4185	0.14	-0.3
5,002,498	+		Echvi_4185	0.16	+0.9
5,002,513	-		Echvi_4185	0.17	+0.7
5,002,513	-		Echvi_4185	0.17	+1.5
5,002,513	-		Echvi_4185	0.17	+0.4
5,002,518	+		Echvi_4185	0.17	-0.8
5,002,652	+		Echvi_4185	0.28	-0.1
5,002,654	+		Echvi_4185	0.28	-1.8
5,002,654	+		Echvi_4185	0.28	-1.8
5,002,655	-		Echvi_4185	0.28	+1.7
5,002,680	-		Echvi_4185	0.30	+0.4
5,002,836	+		Echvi_4185	0.42	-0.7
5,002,836	+		Echvi_4185	0.42	+1.2
5,002,890	-		Echvi_4185	0.47	+0.4
5,002,911	-		Echvi_4185	0.48	+2.1
5,002,975	+		Echvi_4185	0.53	-0.5
5,002,976	-		Echvi_4185	0.53	+1.6
5,002,976	-		Echvi_4185	0.53	+0.0
5,003,127	+		Echvi_4185	0.65	-0.9
5,003,127	+		Echvi_4185	0.65	-0.1
5,003,156	+		Echvi_4185	0.68	-0.4
5,003,156	+		Echvi_4185	0.68	+0.1
5,003,157	-		Echvi_4185	0.68	+0.0
5,003,157	-		Echvi_4185	0.68	+0.2
5,003,161	+		Echvi_4185	0.68	-2.3
5,003,161	+		Echvi_4185	0.68	+1.1
5,003,162	-		Echvi_4185	0.68	-0.7
5,003,162	-		Echvi_4185	0.68	-1.4
5,003,255	+		Echvi_4185	0.75	+1.6
5,003,262	+		Echvi_4185	0.76	-0.4
5,003,263	-		Echvi_4185	0.76	+0.9
5,003,263	-		Echvi_4185	0.76	-0.2
5,003,292	+		Echvi_4185	0.78	+0.1
5,003,292	+		Echvi_4185	0.78	+0.2
5,003,292	+		Echvi_4185	0.78	+1.9
5,003,298	-		Echvi_4185	0.79	+0.2
5,003,298	-		Echvi_4185	0.79	-0.7
5,003,329	+		Echvi_4185	0.81	-0.2
5,003,330	-		Echvi_4185	0.81	-0.2
5,003,374	-		Echvi_4185	0.85	+1.5
5,003,408	+		Echvi_4185	0.87	+0.1
5,003,409	-		Echvi_4185	0.87	+0.6
5,003,421	-		Echvi_4185	0.88	+0.3
5,003,470	+				-0.2
5,003,472	+				-0.1
5,003,472	+				+1.8
5,003,473	-				-0.3
5,003,476	-				-0.6
5,003,516	+				+0.0
5,003,543	+				-0.6
5,003,544	-				+1.6
5,003,566	+				+0.3
5,003,566	+				-0.4
5,003,566	+				-1.0
5,003,580	-				-0.9
5,003,593	+				+0.0
5,003,594	-				+0.6
5,003,597	-				-0.4
5,003,597	-				+2.4
5,003,597	-				-0.4
5,003,611	-				-0.6
5,003,647	+				-0.2
5,003,648	-				+0.3
5,003,684	-				+0.1
5,003,689	-				-0.6
5,003,692	+				-1.4
5,003,693	-				+0.7
5,003,693	-				-0.9
5,003,695	+				-0.0
5,003,695	+				+0.5
5,003,696	-				+0.0
5,003,696	-				-0.0
5,003,696	-				-1.2
5,003,729	+				-0.6
5,003,730	-				+1.5
5,003,736	-				-0.2
5,003,799	+		Echvi_4186	0.12	+0.6
5,003,799	+		Echvi_4186	0.12	-0.3
5,003,847	+		Echvi_4186	0.18	+0.4
5,003,848	-		Echvi_4186	0.18	+0.5
5,003,854	+		Echvi_4186	0.18	-1.1
5,003,854	+		Echvi_4186	0.18	+0.2
5,003,855	-		Echvi_4186	0.19	+0.2
5,003,899	+		Echvi_4186	0.24	+0.5
5,003,995	-		Echvi_4186	0.35	+0.6
5,003,995	-		Echvi_4186	0.35	-0.7
5,003,996	+		Echvi_4186	0.35	+0.2
5,004,025	-		Echvi_4186	0.39	-0.6
5,004,056	-		Echvi_4186	0.42	+0.1
5,004,063	+		Echvi_4186	0.43	-0.1
5,004,064	-		Echvi_4186	0.43	-1.8
5,004,064	-		Echvi_4186	0.43	-0.2
5,004,068	+		Echvi_4186	0.44	-1.4
5,004,068	+		Echvi_4186	0.44	-0.4
5,004,068	+		Echvi_4186	0.44	+0.2
5,004,069	-		Echvi_4186	0.44	-1.0
5,004,069	-		Echvi_4186	0.44	-0.1
5,004,069	-		Echvi_4186	0.44	-0.5
5,004,151	+		Echvi_4186	0.54	+0.6
5,004,181	-		Echvi_4186	0.57	+0.8
5,004,181	-		Echvi_4186	0.57	+0.1
5,004,181	-		Echvi_4186	0.57	+0.8
5,004,185	-		Echvi_4186	0.58	-0.7
5,004,185	-		Echvi_4186	0.58	+0.2
5,004,253	-		Echvi_4186	0.66	+0.7
5,004,256	+		Echvi_4186	0.66	-0.2
5,004,256	+		Echvi_4186	0.66	-0.3
5,004,257	-		Echvi_4186	0.66	+0.6
5,004,259	+		Echvi_4186	0.66	-1.4
5,004,259	+		Echvi_4186	0.66	+0.1
5,004,260	-		Echvi_4186	0.66	+0.8
5,004,264	+		Echvi_4186	0.67	-0.8
5,004,265	-		Echvi_4186	0.67	-0.3
5,004,269	+		Echvi_4186	0.67	+1.0
5,004,269	+		Echvi_4186	0.67	-0.6
5,004,274	+		Echvi_4186	0.68	-0.2
5,004,274	+		Echvi_4186	0.68	-2.6
5,004,275	-		Echvi_4186	0.68	-0.8
5,004,275	-		Echvi_4186	0.68	+2.6
5,004,304	+		Echvi_4186	0.72	-0.8
5,004,357	+		Echvi_4186	0.78	-0.9
5,004,358	-		Echvi_4186	0.78	+0.2
5,004,489	+				-0.9
5,004,499	+				+0.2
5,004,499	+				+0.7
5,004,499	+				-0.1
5,004,500	-				+0.0
5,004,500	-				-0.3
5,004,500	-				+1.3
5,004,500	-				+0.3
5,004,535	-				-1.1
5,004,559	-				+0.5