Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3182

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
3,784,960	+		Echvi_3180	0.72	-1.0
3,784,961	-		Echvi_3180	0.72	-0.9
3,784,967	-		Echvi_3180	0.73	-1.5
3,785,067	+		Echvi_3180	0.83	+0.4
3,785,067	+		Echvi_3180	0.83	-0.9
3,785,067	+		Echvi_3180	0.83	+0.6
3,785,068	-		Echvi_3180	0.83	+0.3
3,785,069	+		Echvi_3180	0.83	-0.1
3,785,069	+		Echvi_3180	0.83	+0.7
3,785,070	-		Echvi_3180	0.83	-1.7
3,785,070	-		Echvi_3180	0.83	+0.6
3,785,070	-		Echvi_3180	0.83	+0.9
3,785,071	+		Echvi_3180	0.83	-0.4
3,785,071	+		Echvi_3180	0.83	+1.9
3,785,072	-		Echvi_3180	0.83	+0.4
3,785,072	-		Echvi_3180	0.83	+0.0
3,785,072	-		Echvi_3180	0.83	-1.0
3,785,105	+		Echvi_3180	0.87	+0.3
3,785,106	-		Echvi_3180	0.87	-1.2
3,785,121	+		Echvi_3180	0.88	+1.0
3,785,121	+		Echvi_3180	0.88	+0.7
3,785,122	-		Echvi_3180	0.88	+1.3
3,785,126	+		Echvi_3180	0.89	+0.9
3,785,127	-		Echvi_3180	0.89	-1.7
3,785,156	+				+1.2
3,785,197	-				+0.6
3,785,197	-				+0.0
3,785,197	-				-0.4
3,785,199	-				-0.2
3,785,219	+				+0.3
3,785,220	-				-0.5
3,785,220	-				+0.7
3,785,224	+				-0.6
3,785,227	+				-0.7
3,785,242	-				+1.6
3,785,248	-				+0.9
3,785,268	+				+0.3
3,785,341	+		Echvi_3181	0.16	-0.6
3,785,341	+		Echvi_3181	0.16	-2.2
3,785,342	-		Echvi_3181	0.16	+0.1
3,785,343	+		Echvi_3181	0.16	-0.0
3,785,343	+		Echvi_3181	0.16	-0.5
3,785,343	+		Echvi_3181	0.16	-0.1
3,785,344	-		Echvi_3181	0.16	+0.5
3,785,344	-		Echvi_3181	0.16	-0.5
3,785,344	-		Echvi_3181	0.16	+0.9
3,785,399	-		Echvi_3181	0.25	+0.4
3,785,399	-		Echvi_3181	0.25	-0.0
3,785,442	-		Echvi_3181	0.32	+0.6
3,785,442	-		Echvi_3181	0.32	+1.2
3,785,507	+		Echvi_3181	0.42	-0.2
3,785,508	-		Echvi_3181	0.42	-0.0
3,785,517	-		Echvi_3181	0.44	-0.3
3,785,571	+		Echvi_3181	0.52	+0.1
3,785,571	+		Echvi_3181	0.52	-0.1
3,785,571	+		Echvi_3181	0.52	+0.1
3,785,571	+		Echvi_3181	0.52	+0.7
3,785,571	+		Echvi_3181	0.52	+1.0
3,785,571	+		Echvi_3181	0.52	+0.3
3,785,571	+		Echvi_3181	0.52	+0.4
3,785,571	+		Echvi_3181	0.52	+2.2
3,785,571	+		Echvi_3181	0.52	-0.3
3,785,571	+		Echvi_3181	0.52	+0.2
3,785,572	-		Echvi_3181	0.52	+0.3
3,785,572	-		Echvi_3181	0.52	+0.3
3,785,572	-		Echvi_3181	0.52	+1.9
3,785,638	+		Echvi_3181	0.63	-0.1
3,785,639	-		Echvi_3181	0.63	+1.6
3,785,661	+		Echvi_3181	0.67	-0.8
3,785,662	-		Echvi_3181	0.67	+0.4
3,785,682	+		Echvi_3181	0.70	+0.6
3,785,682	+		Echvi_3181	0.70	-0.4
3,785,719	+		Echvi_3181	0.76	+0.0
3,785,719	+		Echvi_3181	0.76	-0.1
3,785,720	-		Echvi_3181	0.76	+0.7
3,785,720	-		Echvi_3181	0.76	-0.3
3,785,720	-		Echvi_3181	0.76	+0.9
3,785,723	+		Echvi_3181	0.76	+0.5
3,785,741	+		Echvi_3181	0.79	-0.3
3,785,856	+				-0.5
3,785,857	-				-0.4
3,785,857	-				+3.4
3,785,857	-				-0.4
3,785,894	+				-1.7
3,785,895	-				+0.3
3,785,901	+				+0.4
3,785,941	+				-0.9
3,785,942	-				-0.3
3,786,017	-				+0.0
3,786,018	+				+0.4
3,786,018	+				+0.9
3,786,018	+				+0.0
3,786,019	-				-0.5
3,786,040	+				+0.3
3,786,054	+				+0.0
3,786,055	-				+0.2
3,786,097	+				-0.7
3,786,118	+				-0.8
3,786,201	+		Echvi_3182	0.12	-0.9
3,786,235	+		Echvi_3182	0.13	+1.0
3,786,235	+		Echvi_3182	0.13	-0.3
3,786,248	-		Echvi_3182	0.14	-1.0
3,786,334	+		Echvi_3182	0.17	-1.1
3,786,568	-		Echvi_3182	0.27	-0.2
3,786,573	+		Echvi_3182	0.27	+0.0
3,786,574	-		Echvi_3182	0.27	+0.3
3,786,591	+		Echvi_3182	0.28	-0.5
3,786,592	-		Echvi_3182	0.28	-0.4
3,786,680	+		Echvi_3182	0.31	-0.6
3,786,681	-		Echvi_3182	0.31	+0.9
3,786,681	-		Echvi_3182	0.31	-0.6
3,786,684	+		Echvi_3182	0.31	-0.7
3,786,685	-		Echvi_3182	0.31	+1.7
3,786,712	-		Echvi_3182	0.32	+0.8
3,786,739	+		Echvi_3182	0.33	+1.6
3,786,741	+		Echvi_3182	0.34	+0.4
3,786,767	+		Echvi_3182	0.35	+0.0
3,786,767	+		Echvi_3182	0.35	-1.0
3,786,768	-		Echvi_3182	0.35	-2.0
3,786,857	+		Echvi_3182	0.38	-0.8
3,786,873	+		Echvi_3182	0.39	-0.6
3,786,874	-		Echvi_3182	0.39	-2.1
3,786,884	-		Echvi_3182	0.39	-0.0
3,786,907	+		Echvi_3182	0.40	-1.0
3,786,908	-		Echvi_3182	0.40	+1.6
3,786,909	+		Echvi_3182	0.40	-0.4
3,786,918	+		Echvi_3182	0.41	-0.9
3,786,919	-		Echvi_3182	0.41	-2.7
3,786,972	+		Echvi_3182	0.43	-0.9
3,786,980	-		Echvi_3182	0.43	-2.3
3,786,995	+		Echvi_3182	0.44	+0.2
3,787,043	-		Echvi_3182	0.46	-1.6
3,787,078	+		Echvi_3182	0.47	+1.7
3,787,248	+		Echvi_3182	0.54	-0.1
3,787,310	-		Echvi_3182	0.56	-1.1
3,787,339	+		Echvi_3182	0.57	-0.0
3,787,439	-		Echvi_3182	0.61	-0.7
3,787,534	+		Echvi_3182	0.65	-2.3
3,787,534	+		Echvi_3182	0.65	-1.0
3,787,593	+		Echvi_3182	0.68	+0.5
3,787,594	-		Echvi_3182	0.68	-1.0
3,787,603	-		Echvi_3182	0.68	+0.5
3,787,626	-		Echvi_3182	0.69	-0.7
3,787,676	+		Echvi_3182	0.71	+0.1
3,787,792	+		Echvi_3182	0.76	+0.9
3,787,792	+		Echvi_3182	0.76	-0.1
3,787,824	-		Echvi_3182	0.77	-0.3
3,787,828	+		Echvi_3182	0.77	-0.8
3,787,829	-		Echvi_3182	0.77	+0.5
3,787,829	-		Echvi_3182	0.77	+0.8
3,787,833	+		Echvi_3182	0.77	+0.0
3,787,833	+		Echvi_3182	0.77	-0.4
3,787,833	+		Echvi_3182	0.77	-2.5
3,787,865	-		Echvi_3182	0.78	+0.7
3,787,874	-		Echvi_3182	0.79	+0.8
3,787,874	-		Echvi_3182	0.79	+1.3
3,787,903	+		Echvi_3182	0.80	-1.1
3,787,904	-		Echvi_3182	0.80	-0.1
3,787,972	+		Echvi_3182	0.83	-1.0
3,788,038	+		Echvi_3182	0.85	-0.9
3,788,071	-		Echvi_3182	0.87	-0.7
3,788,071	-		Echvi_3182	0.87	-1.1
3,788,163	+				-1.5
3,788,163	+				+0.2
3,788,164	-				-0.3
3,788,178	+				+0.2
3,788,179	-				+0.7
3,788,179	-				+0.2
3,788,271	-				+0.3
3,788,404	+				-0.0
3,788,405	-				+0.3
3,788,431	+				+0.2
3,788,431	+				-0.7
3,788,586	+		Echvi_3183	0.56	-0.1
3,788,588	+		Echvi_3183	0.56	+0.9
3,788,588	+		Echvi_3183	0.56	-1.6
3,788,609	+		Echvi_3183	0.62	-0.9
3,788,610	-		Echvi_3183	0.63	+0.4
3,788,632	+		Echvi_3183	0.69	-2.4
3,788,632	+		Echvi_3183	0.69	-1.1
3,788,633	-		Echvi_3183	0.70	-0.1
3,788,666	+		Echvi_3183	0.80	-1.1
3,788,723	+				+2.9
3,788,723	+				+1.6
3,788,723	+				+0.9
3,788,723	+				+0.0
3,788,724	-				-0.0
3,788,724	-				-1.3
3,788,724	-				-0.5
3,788,727	+				+1.4
3,788,734	-				+0.9
3,788,858	-		Echvi_3184	0.37	-0.7
3,788,864	+		Echvi_3184	0.39	+0.8
3,788,864	+		Echvi_3184	0.39	-0.6
3,788,865	-		Echvi_3184	0.39	-1.1
3,788,907	-		Echvi_3184	0.52	-1.3
3,788,930	-		Echvi_3184	0.60	+1.3
3,789,134	+				-0.0
3,789,134	+				-1.3
3,789,136	+				+0.5
3,789,136	+				-0.3
3,789,137	-				-1.0
3,789,137	-				-0.2
3,789,137	-				+1.0
3,789,137	-				-0.3
3,789,137	-				-0.1
3,789,140	+				+0.1
3,789,140	+				-0.4
3,789,161	-				+0.1
3,789,180	+				-0.6
3,789,181	-				+1.3
3,789,181	-				-0.6
3,789,217	+				+0.4
3,789,225	-				-1.1
3,789,225	-				+1.2
3,789,246	+				+0.3
3,789,246	+				-0.8
3,789,274	+				+0.0
3,789,299	-				-0.1
3,789,299	-				+0.9
3,789,299	-				-2.0
3,789,302	+				-0.1
3,789,302	+				-1.1
3,789,303	-				+0.3
3,789,303	-				-0.7
3,789,307	+				-0.0
3,789,393	-		Echvi_3185	0.15	-1.5
3,789,402	+		Echvi_3185	0.17	-0.8
3,789,403	-		Echvi_3185	0.17	+0.9
3,789,404	+				-0.1
3,789,404	+		Echvi_3185	0.17	-0.1
3,789,404	+		Echvi_3185	0.17	-0.2