Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3082

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
3,676,409	-				+1.2
3,676,409	-				-1.6
3,676,426	+				-0.6
3,676,427	-				+1.2
3,676,458	+				+0.3
3,676,494	+				+0.3
3,676,509	-				+1.2
3,676,515	-				-0.9
3,676,528	+				-0.6
3,676,529	-				-1.3
3,676,542	-				+0.7
3,676,558	-				-0.7
3,676,558	-				+0.0
3,676,558	-				-0.1
3,676,558	-				+1.1
3,676,587	+				+1.6
3,676,587	+				+0.2
3,676,587	+				+0.2
3,676,588	-				-0.2
3,676,606	+				+0.6
3,676,624	+				-2.1
3,676,625	-				+0.3
3,676,653	-		Echvi_3081	0.11	-0.8
3,676,682	+		Echvi_3081	0.14	+1.5
3,676,684	+		Echvi_3081	0.14	+0.3
3,676,694	+		Echvi_3081	0.16	+1.3
3,676,712	+		Echvi_3081	0.18	+0.8
3,676,712	+		Echvi_3081	0.18	+0.3
3,676,714	+		Echvi_3081	0.18	-0.5
3,676,715	-		Echvi_3081	0.18	+0.2
3,676,715	-		Echvi_3081	0.18	-0.6
3,676,715	-		Echvi_3081	0.18	+1.5
3,676,782	+		Echvi_3081	0.26	-1.1
3,676,782	+		Echvi_3081	0.26	-0.8
3,676,782	+		Echvi_3081	0.26	-0.4
3,676,782	+		Echvi_3081	0.26	-0.1
3,676,782	+		Echvi_3081	0.26	-0.1
3,676,816	+		Echvi_3081	0.31	-0.4
3,676,892	+		Echvi_3081	0.40	-1.6
3,676,893	-		Echvi_3081	0.40	-1.3
3,676,893	-		Echvi_3081	0.40	-1.1
3,676,895	-		Echvi_3081	0.40	+0.3
3,676,940	-		Echvi_3081	0.46	+1.3
3,676,940	-		Echvi_3081	0.46	+0.6
3,676,940	-		Echvi_3081	0.46	+0.0
3,676,990	+		Echvi_3081	0.52	+0.4
3,676,998	-		Echvi_3081	0.53	-1.9
3,677,072	+		Echvi_3081	0.62	+0.2
3,677,104	-		Echvi_3081	0.66	-0.0
3,677,114	+		Echvi_3081	0.67	+0.7
3,677,114	+		Echvi_3081	0.67	+0.2
3,677,114	+		Echvi_3081	0.67	+0.3
3,677,115	-		Echvi_3081	0.67	+2.9
3,677,115	-		Echvi_3081	0.67	-0.3
3,677,117	+		Echvi_3081	0.67	-1.0
3,677,117	+		Echvi_3081	0.67	+0.6
3,677,117	+		Echvi_3081	0.67	+0.9
3,677,118	-		Echvi_3081	0.67	-1.3
3,677,118	-		Echvi_3081	0.67	+0.4
3,677,118	-		Echvi_3081	0.67	+0.2
3,677,120	-		Echvi_3081	0.68	+0.8
3,677,164	-		Echvi_3081	0.73	-0.6
3,677,213	+		Echvi_3081	0.79	-1.1
3,677,213	+		Echvi_3081	0.79	-1.8
3,677,213	+		Echvi_3081	0.79	+0.1
3,677,228	+		Echvi_3081	0.81	-0.2
3,677,279	-		Echvi_3081	0.87	+0.0
3,677,333	+				-1.0
3,677,391	-				-1.3
3,677,416	-				-0.1
3,677,434	-				+0.5
3,677,480	+				-0.1
3,677,509	-				+1.0
3,677,531	-				+0.6
3,677,531	-				+1.7
3,677,531	-				+0.2
3,677,531	-				+0.5
3,677,531	-				+0.7
3,677,568	-				-0.4
3,677,642	+		Echvi_3082	0.13	+1.5
3,677,643	-		Echvi_3082	0.13	-0.1
3,677,717	-		Echvi_3082	0.17	+0.0
3,677,723	+		Echvi_3082	0.17	+0.4
3,677,723	+		Echvi_3082	0.17	+0.9
3,677,734	+		Echvi_3082	0.18	-1.6
3,677,735	-		Echvi_3082	0.18	+0.4
3,677,747	+		Echvi_3082	0.18	+0.5
3,677,747	+		Echvi_3082	0.18	+1.0
3,677,747	+		Echvi_3082	0.18	+0.4
3,677,748	-		Echvi_3082	0.18	+0.6
3,677,748	-		Echvi_3082	0.18	+1.9
3,677,748	-		Echvi_3082	0.18	-0.2
3,677,749	+		Echvi_3082	0.18	+0.5
3,677,749	+		Echvi_3082	0.18	+0.6
3,677,750	-		Echvi_3082	0.19	-1.9
3,677,750	-		Echvi_3082	0.19	+0.3
3,677,768	+		Echvi_3082	0.19	+0.3
3,677,768	+		Echvi_3082	0.19	-0.2
3,677,769	-		Echvi_3082	0.20	-2.2
3,677,769	-		Echvi_3082	0.20	-0.1
3,677,770	+		Echvi_3082	0.20	-1.8
3,677,770	+		Echvi_3082	0.20	-1.2
3,677,809	+		Echvi_3082	0.22	+0.3
3,677,809	+		Echvi_3082	0.22	-0.6
3,677,824	+		Echvi_3082	0.22	-1.0
3,677,839	-		Echvi_3082	0.23	+0.6
3,677,899	+		Echvi_3082	0.26	-0.9
3,677,954	-		Echvi_3082	0.29	-1.6
3,677,963	+		Echvi_3082	0.30	+0.3
3,677,963	+		Echvi_3082	0.30	+0.7
3,677,964	-		Echvi_3082	0.30	-0.1
3,677,966	-		Echvi_3082	0.30	-1.2
3,677,986	+		Echvi_3082	0.31	-1.7
3,677,989	-		Echvi_3082	0.31	+1.7
3,678,009	+		Echvi_3082	0.32	-1.9
3,678,009	+		Echvi_3082	0.32	+1.2
3,678,010	-		Echvi_3082	0.32	-0.8
3,678,047	+		Echvi_3082	0.34	+0.0
3,678,047	+		Echvi_3082	0.34	+0.1
3,678,226	+		Echvi_3082	0.44	+0.4
3,678,264	-		Echvi_3082	0.46	-0.8
3,678,264	-		Echvi_3082	0.46	-0.9
3,678,298	+		Echvi_3082	0.47	-0.1
3,678,354	-		Echvi_3082	0.50	+0.2
3,678,354	-		Echvi_3082	0.50	+0.1
3,678,355	+		Echvi_3082	0.50	+0.9
3,678,369	+		Echvi_3082	0.51	+0.6
3,678,423	-		Echvi_3082	0.54	+1.3
3,678,467	+		Echvi_3082	0.56	-0.6
3,678,477	-		Echvi_3082	0.57	+2.3
3,678,502	+		Echvi_3082	0.58	+0.0
3,678,503	-		Echvi_3082	0.58	+0.7
3,678,507	+		Echvi_3082	0.58	-0.8
3,678,513	+		Echvi_3082	0.59	+1.5
3,678,513	+		Echvi_3082	0.59	-2.4
3,678,514	-		Echvi_3082	0.59	-0.6
3,678,538	-		Echvi_3082	0.60	-0.9
3,678,538	-		Echvi_3082	0.60	-0.5
3,678,542	+		Echvi_3082	0.60	+1.9
3,678,553	-		Echvi_3082	0.61	+0.3
3,678,559	+		Echvi_3082	0.61	-1.3
3,678,560	-		Echvi_3082	0.61	-0.7
3,678,560	-		Echvi_3082	0.61	+0.1
3,678,619	-		Echvi_3082	0.64	-1.3
3,678,698	+		Echvi_3082	0.69	-0.3
3,678,702	+		Echvi_3082	0.69	-0.7
3,678,702	+		Echvi_3082	0.69	-0.3
3,678,703	-		Echvi_3082	0.69	+0.4
3,678,758	+		Echvi_3082	0.72	+0.5
3,678,758	+		Echvi_3082	0.72	+0.9
3,678,758	+		Echvi_3082	0.72	+0.5
3,678,758	+		Echvi_3082	0.72	+2.3
3,678,758	+		Echvi_3082	0.72	-1.2
3,678,758	+		Echvi_3082	0.72	+0.0
3,678,759	-		Echvi_3082	0.72	-0.8
3,678,759	-		Echvi_3082	0.72	-0.5
3,678,766	-		Echvi_3082	0.72	-0.4
3,678,766	-		Echvi_3082	0.72	+3.5
3,678,766	-		Echvi_3082	0.72	-0.7
3,678,900	-		Echvi_3082	0.79	-1.9
3,678,900	-		Echvi_3082	0.79	+0.3
3,678,954	+		Echvi_3082	0.82	-0.6
3,678,955	-		Echvi_3082	0.82	-0.5
3,678,955	-		Echvi_3082	0.82	+0.6
3,679,034	+		Echvi_3082	0.86	-0.3
3,679,034	+		Echvi_3082	0.86	+2.0
3,679,034	+		Echvi_3082	0.86	+1.0
3,679,034	+		Echvi_3082	0.86	-0.6
3,679,034	+		Echvi_3082	0.86	-0.5
3,679,034	+		Echvi_3082	0.86	+0.1
3,679,035	-		Echvi_3082	0.86	+0.1
3,679,075	-		Echvi_3082	0.88	+1.6
3,679,185	-				+0.8
3,679,262	+				+0.3
3,679,316	-				-1.0
3,679,490	+				+0.1
3,679,490	+				+0.4
3,679,556	-				+0.9
3,679,573	-				-0.1
3,679,599	-				-1.2
3,679,599	-				-1.3
3,679,628	-				+0.6
3,679,641	+				+0.1
3,679,641	+				+1.3
3,679,653	-				+0.1
3,679,685	+				+2.6
3,679,697	+				+1.3
3,679,698	-				-0.0
3,679,698	-				+0.6
3,679,884	+				+0.9
3,679,898	-				+0.6
3,679,898	-				+1.3
3,679,931	-				-1.3
3,679,963	-				+0.3
3,680,017	+				-0.0
3,680,018	-				+0.1
3,680,030	-				-0.4
3,680,070	+		Echvi_3083	0.11	-0.9
3,680,071	-		Echvi_3083	0.11	+0.2
3,680,073	+		Echvi_3083	0.11	-0.5
3,680,074	-		Echvi_3083	0.11	-0.8
3,680,078	+		Echvi_3083	0.11	+0.1
3,680,079	-		Echvi_3083	0.11	-0.4
3,680,208	+		Echvi_3083	0.15	-0.6
3,680,253	+		Echvi_3083	0.16	+0.2
3,680,294	+		Echvi_3083	0.17	-0.0
3,680,294	+		Echvi_3083	0.17	-0.3