Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1935

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
2,277,178	+		Echvi_1933	0.47	-0.2
2,277,179	-		Echvi_1933	0.47	-0.1
2,277,185	+		Echvi_1933	0.48	+0.3
2,277,185	+		Echvi_1933	0.48	-0.4
2,277,188	+		Echvi_1933	0.48	+1.4
2,277,218	-		Echvi_1933	0.52	-0.8
2,277,277	+		Echvi_1933	0.58	-0.6
2,277,350	+		Echvi_1933	0.66	-0.1
2,277,378	+		Echvi_1933	0.69	+0.1
2,277,379	-		Echvi_1933	0.70	-1.6
2,277,390	-		Echvi_1933	0.71	+0.6
2,277,434	+		Echvi_1933	0.76	-0.8
2,277,444	-		Echvi_1933	0.77	+0.1
2,277,447	+		Echvi_1933	0.77	+0.8
2,277,448	-		Echvi_1933	0.77	+0.7
2,277,453	+		Echvi_1933	0.78	-1.1
2,277,539	+		Echvi_1933	0.87	+0.1
2,277,551	+		Echvi_1933	0.89	-0.7
2,277,555	-		Echvi_1933	0.89	-0.2
2,277,555	-		Echvi_1933	0.89	-1.8
2,277,575	+				+0.3
2,277,637	+				+0.2
2,277,637	+				-0.7
2,277,721	+		Echvi_1934	0.26	-1.3
2,277,721	+		Echvi_1934	0.26	+0.1
2,277,724	+		Echvi_1934	0.28	+1.0
2,277,725	-		Echvi_1934	0.28	+1.2
2,277,736	+		Echvi_1934	0.32	+1.2
2,277,742	+		Echvi_1934	0.34	+0.6
2,277,742	+		Echvi_1934	0.34	-0.7
2,277,743	-		Echvi_1934	0.35	-0.1
2,277,744	+		Echvi_1934	0.35	+0.5
2,277,781	-		Echvi_1934	0.50	+0.1
2,277,826	+		Echvi_1934	0.67	+0.6
2,277,826	+		Echvi_1934	0.67	+0.8
2,277,826	+		Echvi_1934	0.67	+0.4
2,277,827	-		Echvi_1934	0.67	+0.2
2,277,827	-		Echvi_1934	0.67	-0.2
2,277,828	+		Echvi_1934	0.68	-0.3
2,277,911	-				-0.4
2,277,950	-				-0.6
2,277,950	-				+0.5
2,277,983	+				+0.4
2,277,983	+				-0.1
2,277,983	+				-0.1
2,278,012	+				-1.4
2,278,024	+				+2.0
2,278,039	+				+1.3
2,278,040	-				+0.3
2,278,067	-				+0.4
2,278,073	+				-0.8
2,278,073	+				+1.0
2,278,074	-				-0.1
2,278,074	-				+0.1
2,278,166	-				+0.1
2,278,166	-				-0.6
2,278,166	-				-0.7
2,278,166	-				+1.6
2,278,172	+				+0.2
2,278,172	+				+1.1
2,278,174	+				+0.1
2,278,174	+				+0.5
2,278,175	-				+0.6
2,278,200	+				+0.3
2,278,205	-				-0.4
2,278,206	+				+1.3
2,278,237	+				+1.4
2,278,264	-				-0.1
2,278,277	+		Echvi_1935	0.11	+0.6
2,278,289	-		Echvi_1935	0.12	-0.2
2,278,295	+		Echvi_1935	0.13	+1.0
2,278,298	+		Echvi_1935	0.13	-2.6
2,278,299	-		Echvi_1935	0.13	-0.3
2,278,385	+		Echvi_1935	0.21	+0.8
2,278,388	-		Echvi_1935	0.22	+0.6
2,278,398	-		Echvi_1935	0.23	-2.1
2,278,427	+		Echvi_1935	0.25	-0.0
2,278,466	+		Echvi_1935	0.29	-0.4
2,278,467	-		Echvi_1935	0.29	-0.4
2,278,472	+		Echvi_1935	0.30	+0.6
2,278,472	+		Echvi_1935	0.30	+0.7
2,278,472	+		Echvi_1935	0.30	-0.3
2,278,472	+		Echvi_1935	0.30	-0.1
2,278,522	-		Echvi_1935	0.35	+0.5
2,278,559	+		Echvi_1935	0.38	+1.1
2,278,562	+		Echvi_1935	0.39	-0.6
2,278,579	-		Echvi_1935	0.40	+0.3
2,278,593	-		Echvi_1935	0.42	-1.2
2,278,612	+		Echvi_1935	0.43	-0.3
2,278,612	+		Echvi_1935	0.43	+2.3
2,278,616	+		Echvi_1935	0.44	+0.6
2,278,616	+		Echvi_1935	0.44	+1.1
2,278,632	+		Echvi_1935	0.45	+0.4
2,278,632	+		Echvi_1935	0.45	-2.4
2,278,634	+		Echvi_1935	0.46	+1.2
2,278,674	-		Echvi_1935	0.49	+0.5
2,278,674	-		Echvi_1935	0.49	+0.1
2,278,732	-		Echvi_1935	0.55	-1.4
2,278,827	-		Echvi_1935	0.64	-1.9
2,278,864	+		Echvi_1935	0.68	+1.4
2,278,946	+		Echvi_1935	0.76	+0.1
2,278,967	+		Echvi_1935	0.78	-0.4
2,278,967	+		Echvi_1935	0.78	-0.6
2,278,967	+		Echvi_1935	0.78	+0.4
2,278,968	-		Echvi_1935	0.78	+0.4
2,278,968	-		Echvi_1935	0.78	+0.5
2,278,970	-		Echvi_1935	0.78	-0.1
2,279,062	-		Echvi_1935	0.87	-1.3
2,279,084	+		Echvi_1935	0.89	+1.1
2,279,085	-		Echvi_1935	0.89	+0.5
2,279,085	-		Echvi_1935	0.89	+0.0
2,279,087	+		Echvi_1935	0.89	+0.5
2,279,087	+		Echvi_1935	0.89	+1.2
2,279,088	-		Echvi_1935	0.90	+1.0
2,279,088	-		Echvi_1935	0.90	-1.1
2,279,097	-				-0.4
2,279,098	+				-2.3
2,279,098	+				+0.3
2,279,098	+				+0.3
2,279,099	-				-0.0
2,279,102	+				+0.4
2,279,105	+				-1.0
2,279,130	+				+0.8
2,279,130	+				+0.2
2,279,175	+				+0.1
2,279,175	+				+1.0
2,279,176	-				-0.1
2,279,176	-				+0.7
2,279,176	-				+0.0
2,279,176	-				+0.1
2,279,198	+				+0.6
2,279,198	+				+1.0
2,279,199	-				+0.4
2,279,214	+				+0.3
2,279,243	-				-0.8
2,279,243	-				-1.3
2,279,275	+				+0.1
2,279,275	+				+1.0
2,279,289	+				-0.7
2,279,289	+				-0.4
2,279,289	+				+0.8
2,279,290	-				-3.3
2,279,297	+				-0.3
2,279,339	+		Echvi_1936	0.10	+0.9
2,279,339	+		Echvi_1936	0.10	-0.6
2,279,339	+		Echvi_1936	0.10	+0.5
2,279,340	-		Echvi_1936	0.10	-1.6
2,279,357	-		Echvi_1936	0.11	-0.6
2,279,358	+		Echvi_1936	0.11	-0.1
2,279,359	-		Echvi_1936	0.11	+0.2
2,279,366	+		Echvi_1936	0.12	-0.2
2,279,366	+		Echvi_1936	0.12	+1.3
2,279,377	+		Echvi_1936	0.13	+0.1
2,279,390	-		Echvi_1936	0.13	+0.6
2,279,460	+		Echvi_1936	0.18	-1.6
2,279,460	+		Echvi_1936	0.18	+0.4
2,279,461	-		Echvi_1936	0.18	-0.8
2,279,479	+		Echvi_1936	0.19	-0.1
2,279,479	+		Echvi_1936	0.19	+1.9
2,279,483	+		Echvi_1936	0.19	+0.3
2,279,483	+		Echvi_1936	0.19	+0.9
2,279,483	+		Echvi_1936	0.19	+1.5
2,279,484	-		Echvi_1936	0.19	+0.7
2,279,484	-		Echvi_1936	0.19	+0.0
2,279,496	-		Echvi_1936	0.20	-0.3
2,279,557	+		Echvi_1936	0.24	+0.4
2,279,557	+		Echvi_1936	0.24	+0.2
2,279,558	-		Echvi_1936	0.24	+0.3
2,279,561	+		Echvi_1936	0.24	-2.4
2,279,561	+		Echvi_1936	0.24	+1.3
2,279,561	+		Echvi_1936	0.24	+0.2
2,279,561	+		Echvi_1936	0.24	+1.1
2,279,561	+		Echvi_1936	0.24	-0.5
2,279,562	-		Echvi_1936	0.24	+1.4
2,279,562	-		Echvi_1936	0.24	+0.4
2,279,562	-		Echvi_1936	0.24	+0.5
2,279,562	-		Echvi_1936	0.24	+1.3
2,279,592	-		Echvi_1936	0.26	+0.1
2,279,621	-		Echvi_1936	0.28	+0.4
2,279,639	+		Echvi_1936	0.29	+0.4
2,279,662	+		Echvi_1936	0.31	-0.1
2,279,662	+		Echvi_1936	0.31	+0.3
2,279,663	-		Echvi_1936	0.31	-0.2
2,279,663	-		Echvi_1936	0.31	-0.1
2,279,678	-		Echvi_1936	0.32	+0.0
2,279,713	+		Echvi_1936	0.34	+0.8
2,279,714	-		Echvi_1936	0.34	-0.7
2,279,755	+		Echvi_1936	0.37	-0.9
2,279,756	-		Echvi_1936	0.37	-0.1
2,279,794	+		Echvi_1936	0.39	-0.5
2,279,794	+		Echvi_1936	0.39	-0.6
2,279,795	-		Echvi_1936	0.39	-0.6
2,279,795	-		Echvi_1936	0.39	+0.7
2,279,800	+		Echvi_1936	0.40	+0.1
2,279,800	+		Echvi_1936	0.40	+0.3
2,279,875	+		Echvi_1936	0.45	-0.0
2,279,875	+		Echvi_1936	0.45	-0.3
2,279,885	+		Echvi_1936	0.45	+2.3
2,279,885	+		Echvi_1936	0.45	-0.2
2,279,885	+		Echvi_1936	0.45	+0.7
2,279,885	+		Echvi_1936	0.45	-0.1
2,279,907	-				+0.9
2,279,915	+		Echvi_1936	0.47	-2.1
2,279,916	-		Echvi_1936	0.47	+1.5
2,279,980	+		Echvi_1936	0.51	+1.6
2,279,980	+		Echvi_1936	0.51	+1.2
2,280,000	-		Echvi_1936	0.53	-1.8
2,280,019	+		Echvi_1936	0.54	-0.6
2,280,069	+		Echvi_1936	0.57	-0.1
2,280,193	+		Echvi_1936	0.65	-0.4