Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1645

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
1,902,032	+		Echvi_1644	0.56	+0.5
1,902,119	-		Echvi_1644	0.62	+0.4
1,902,180	+		Echvi_1644	0.66	+0.1
1,902,181	-		Echvi_1644	0.66	-0.8
1,902,338	+		Echvi_1644	0.76	+0.7
1,902,338	+		Echvi_1644	0.76	-0.3
1,902,339	-		Echvi_1644	0.76	+3.0
1,902,339	-		Echvi_1644	0.76	-1.8
1,902,339	-		Echvi_1644	0.76	-1.5
1,902,368	-		Echvi_1644	0.78	-0.5
1,902,482	+		Echvi_1644	0.85	-1.0
1,902,520	-		Echvi_1644	0.88	-0.4
1,902,710	+				-0.6
1,902,711	-				-0.9
1,902,747	+				+0.7
1,902,747	+				+0.2
1,902,753	+				-0.8
1,902,753	+				-0.9
1,902,753	+				+0.2
1,902,753	+				-2.1
1,902,753	+				+0.4
1,902,754	-				+0.8
1,902,754	-				-0.5
1,902,819	+				-1.6
1,902,820	-				+0.2
1,902,820	-				-0.8
1,902,845	-				+1.6
1,902,933	-				+0.1
1,903,056	+				-0.4
1,903,057	-				+1.3
1,903,057	-				+2.5
1,903,057	-				+0.9
1,903,064	-				-0.3
1,903,068	+				-1.1
1,903,090	+				+0.7
1,903,269	-				+0.2
1,903,269	-				+0.7
1,903,286	-				+1.7
1,903,433	+		Echvi_1645	0.13	-0.0
1,903,433	+		Echvi_1645	0.13	-0.5
1,903,509	+		Echvi_1645	0.15	-0.6
1,903,519	-		Echvi_1645	0.15	+0.6
1,903,602	+		Echvi_1645	0.17	-0.0
1,903,603	-		Echvi_1645	0.17	+0.5
1,903,658	+		Echvi_1645	0.19	-0.1
1,903,658	+		Echvi_1645	0.19	-1.8
1,903,658	+		Echvi_1645	0.19	+1.3
1,903,659	-		Echvi_1645	0.19	-0.3
1,903,659	-		Echvi_1645	0.19	-0.3
1,903,685	+		Echvi_1645	0.20	+1.5
1,903,685	+		Echvi_1645	0.20	+0.4
1,903,780	+		Echvi_1645	0.22	-0.8
1,903,843	-		Echvi_1645	0.24	+1.0
1,903,897	+		Echvi_1645	0.25	-0.4
1,903,898	-		Echvi_1645	0.25	+0.4
1,903,988	+		Echvi_1645	0.28	+0.2
1,903,988	+		Echvi_1645	0.28	-0.1
1,904,055	+		Echvi_1645	0.30	-1.0
1,904,180	-		Echvi_1645	0.33	+0.7
1,904,180	-		Echvi_1645	0.33	+0.1
1,904,345	-		Echvi_1645	0.38	-0.2
1,904,361	+		Echvi_1645	0.38	-0.9
1,904,361	+		Echvi_1645	0.38	-0.5
1,904,396	+		Echvi_1645	0.39	-1.6
1,904,396	+		Echvi_1645	0.39	+0.1
1,904,397	-		Echvi_1645	0.39	-0.1
1,904,399	+		Echvi_1645	0.39	-1.4
1,904,400	-		Echvi_1645	0.39	-1.1
1,904,491	+		Echvi_1645	0.42	-0.4
1,904,492	-		Echvi_1645	0.42	+0.3
1,904,614	+		Echvi_1645	0.45	-0.5
1,904,615	-		Echvi_1645	0.45	-0.3
1,904,695	-		Echvi_1645	0.47	-0.6
1,904,695	-		Echvi_1645	0.47	+1.9
1,904,718	+		Echvi_1645	0.48	-1.1
1,904,718	+		Echvi_1645	0.48	-1.6
1,904,718	+		Echvi_1645	0.48	+0.7
1,904,718	+		Echvi_1645	0.48	+0.0
1,904,719	-		Echvi_1645	0.48	-0.4
1,904,721	-		Echvi_1645	0.48	-0.5
1,904,792	+		Echvi_1645	0.50	+1.3
1,904,814	-		Echvi_1645	0.50	-0.9
1,904,814	-		Echvi_1645	0.50	+1.7
1,904,817	+		Echvi_1645	0.51	-0.9
1,904,817	+		Echvi_1645	0.51	+0.5
1,904,817	+		Echvi_1645	0.51	-0.8
1,904,818	-		Echvi_1645	0.51	+1.1
1,904,818	-		Echvi_1645	0.51	+1.2
1,904,883	+		Echvi_1645	0.52	-0.6
1,904,883	+		Echvi_1645	0.52	-0.8
1,904,883	+		Echvi_1645	0.52	-1.0
1,905,091	-		Echvi_1645	0.58	+0.7
1,905,156	+		Echvi_1645	0.60	-0.9
1,905,162	+		Echvi_1645	0.60	-0.3
1,905,272	+		Echvi_1645	0.63	+2.3
1,905,367	+		Echvi_1645	0.66	-0.4
1,905,382	+		Echvi_1645	0.66	-0.7
1,905,387	+		Echvi_1645	0.66	-0.3
1,905,403	-		Echvi_1645	0.67	-0.3
1,905,406	-		Echvi_1645	0.67	-1.0
1,905,493	+		Echvi_1645	0.69	-0.8
1,905,494	-		Echvi_1645	0.69	-1.3
1,905,494	-		Echvi_1645	0.69	-0.7
1,905,591	-		Echvi_1645	0.72	+0.2
1,905,591	-		Echvi_1645	0.72	-0.3
1,905,617	-		Echvi_1645	0.72	+0.3
1,905,627	+		Echvi_1645	0.73	+0.1
1,905,628	-		Echvi_1645	0.73	-0.4
1,905,648	+		Echvi_1645	0.73	+1.0
1,905,649	-		Echvi_1645	0.73	+1.7
1,905,672	+		Echvi_1645	0.74	+0.8
1,905,672	+		Echvi_1645	0.74	+1.0
1,905,672	+		Echvi_1645	0.74	+0.0
1,905,672	+		Echvi_1645	0.74	-0.0
1,905,673	-		Echvi_1645	0.74	-0.0
1,905,673	-		Echvi_1645	0.74	+0.0
1,905,673	-		Echvi_1645	0.74	-0.9
1,905,673	-		Echvi_1645	0.74	+0.2
1,905,673	-		Echvi_1645	0.74	-0.5
1,905,673	-		Echvi_1645	0.74	+1.9
1,905,673	-		Echvi_1645	0.74	-0.8
1,905,673	-		Echvi_1645	0.74	-0.9
1,905,716	+		Echvi_1645	0.75	+0.7
1,905,811	-		Echvi_1645	0.78	+0.2
1,905,812	+		Echvi_1645	0.78	+0.2
1,905,813	-		Echvi_1645	0.78	+0.3
1,905,813	-		Echvi_1645	0.78	-0.7
1,905,853	-		Echvi_1645	0.79	-0.3
1,905,855	+		Echvi_1645	0.79	+0.0
1,905,856	-		Echvi_1645	0.79	-2.3
1,905,856	-		Echvi_1645	0.79	+0.5
1,905,856	-		Echvi_1645	0.79	+0.3
1,905,900	+		Echvi_1645	0.80	-0.4
1,905,901	-		Echvi_1645	0.80	-0.4
1,905,942	+		Echvi_1645	0.81	+0.6
1,905,954	-		Echvi_1645	0.82	-0.2
1,905,954	-		Echvi_1645	0.82	-0.2
1,905,994	+		Echvi_1645	0.83	-0.8
1,905,995	-		Echvi_1645	0.83	+0.0
1,906,021	+		Echvi_1645	0.83	-1.7
1,906,022	-		Echvi_1645	0.83	-0.9
1,906,100	+		Echvi_1645	0.86	-1.5
1,906,100	+		Echvi_1645	0.86	-0.3
1,906,104	+		Echvi_1645	0.86	-1.9
1,906,105	-		Echvi_1645	0.86	-0.4
1,906,105	-		Echvi_1645	0.86	-1.4
1,906,105	-		Echvi_1645	0.86	-0.5
1,906,110	+		Echvi_1645	0.86	-1.5
1,906,110	+		Echvi_1645	0.86	-0.2
1,906,111	-		Echvi_1645	0.86	+0.9
1,906,111	-		Echvi_1645	0.86	+0.5
1,906,145	+		Echvi_1645	0.87	+0.5
1,906,166	+		Echvi_1645	0.87	+0.7
1,906,167	-		Echvi_1645	0.87	-0.7
1,906,167	-		Echvi_1645	0.87	+1.0
1,906,196	+		Echvi_1645	0.88	+0.0
1,906,196	+		Echvi_1645	0.88	+0.5
1,906,196	+		Echvi_1645	0.88	-1.4
1,906,196	+		Echvi_1645	0.88	-2.1
1,906,197	-		Echvi_1645	0.88	-0.3
1,906,197	-				+0.0
1,906,197	-		Echvi_1645	0.88	+0.2
1,906,197	-		Echvi_1645	0.88	+1.0
1,906,229	+		Echvi_1645	0.89	-0.2
1,906,229	+		Echvi_1645	0.89	+0.0
1,906,277	+				-0.5
1,906,310	-				+0.9
1,906,408	+				-1.2
1,906,408	+				+0.5
1,906,409	-				+0.7
1,906,466	+				-0.2
1,906,466	+				+0.0
1,906,467	-				-0.1
1,906,467	-				-1.3
1,906,477	-				-0.4
1,906,488	-				-1.1
1,906,488	-				+0.8
1,906,606	+				-0.0
1,906,606	+				-1.2
1,906,606	+				-0.8
1,906,606	+				-0.4
1,906,606	+				-1.1
1,906,607	-				-0.3
1,906,607	-				-1.1
1,906,607	-				+1.0
1,906,607	-				-0.5
1,906,609	-				-0.1
1,906,682	-				+0.3
1,906,690	+				+0.9
1,906,691	-				+0.5
1,906,708	-				+0.3
1,906,721	+				-0.4
1,906,745	-				-1.7
1,906,745	-				+0.5
1,906,805	+		Echvi_1646	0.24	+0.5
1,906,817	+		Echvi_1646	0.27	-0.2
1,906,824	+		Echvi_1646	0.28	+0.6
1,906,832	-		Echvi_1646	0.30	-1.3
1,906,837	+		Echvi_1646	0.31	+0.4
1,906,838	-		Echvi_1646	0.32	-0.3
1,906,842	+		Echvi_1646	0.33	+0.5
1,906,843	-		Echvi_1646	0.33	+0.2
1,906,843	-		Echvi_1646	0.33	+2.5
1,906,848	-		Echvi_1646	0.34	+2.0
1,906,926	-		Echvi_1646	0.53	+0.2
1,907,102	+				-1.1
1,907,104	+				-0.5
1,907,107	+				+1.4
1,907,163	-				-0.3
1,907,163	-				-0.6
1,907,183	+				-0.8
1,907,193	+				+0.5
1,907,234	-				+0.4
1,907,255	-				+0.5
1,907,311	+				+0.4
1,907,317	+				-0.0
1,907,371	+		Echvi_1647	0.13	-0.0
1,907,371	+		Echvi_1647	0.13	+0.0
1,907,371	+		Echvi_1647	0.13	-1.0
1,907,402	+		Echvi_1647	0.16	+0.3
1,907,421	-		Echvi_1647	0.17	+1.0
1,907,422	+		Echvi_1647	0.17	-0.3
1,907,423	-		Echvi_1647	0.17	-0.8
1,907,528	+		Echvi_1647	0.24	+0.8
1,907,551	+		Echvi_1647	0.26	-0.0
1,907,552	-		Echvi_1647	0.26	+0.6
1,907,552	-		Echvi_1647	0.26	+0.8
1,907,552	-		Echvi_1647	0.26	+0.5
1,907,573	+		Echvi_1647	0.27	-1.3
1,907,573	+		Echvi_1647	0.27	+1.0
1,907,573	+		Echvi_1647	0.27	+0.2
1,907,574	-		Echvi_1647	0.27	-0.7
1,907,599	+		Echvi_1647	0.29	+0.8
1,907,600	-		Echvi_1647	0.29	+0.6
1,907,626	+		Echvi_1647	0.31	-0.5
1,907,626	+		Echvi_1647	0.31	+0.1
1,907,626	+		Echvi_1647	0.31	+1.5
1,907,626	+		Echvi_1647	0.31	+2.6