Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1441

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
1,653,617	-		Echvi_1440	0.26	-0.4
1,653,651	+		Echvi_1440	0.30	-0.3
1,653,651	+		Echvi_1440	0.30	-0.5
1,653,651	+		Echvi_1440	0.30	-0.8
1,653,652	-		Echvi_1440	0.30	-0.2
1,653,652	-		Echvi_1440	0.30	+4.1
1,653,662	+		Echvi_1440	0.31	-0.2
1,653,662	+		Echvi_1440	0.31	+0.1
1,653,663	-		Echvi_1440	0.31	+0.4
1,653,675	+		Echvi_1440	0.32	+1.5
1,653,693	+		Echvi_1440	0.34	+0.6
1,653,694	-		Echvi_1440	0.34	+0.1
1,653,741	-		Echvi_1440	0.39	-0.7
1,653,741	-		Echvi_1440	0.39	-0.5
1,653,741	-		Echvi_1440	0.39	+0.3
1,653,846	-		Echvi_1440	0.49	+0.6
1,653,846	-		Echvi_1440	0.49	-0.1
1,653,873	+		Echvi_1440	0.52	+0.4
1,653,905	+		Echvi_1440	0.55	-1.3
1,653,905	+		Echvi_1440	0.55	+0.3
1,653,906	-		Echvi_1440	0.55	-1.7
1,653,916	-		Echvi_1440	0.56	-0.4
1,653,956	+		Echvi_1440	0.60	+0.6
1,653,956	+		Echvi_1440	0.60	+0.1
1,653,965	-		Echvi_1440	0.61	-0.3
1,653,966	+		Echvi_1440	0.61	-0.1
1,653,966	+		Echvi_1440	0.61	+0.8
1,653,966	+		Echvi_1440	0.61	+0.1
1,653,966	+		Echvi_1440	0.61	-0.2
1,653,967	-		Echvi_1440	0.61	-0.2
1,653,998	-		Echvi_1440	0.64	+0.5
1,653,998	-		Echvi_1440	0.64	+0.1
1,653,998	-		Echvi_1440	0.64	-1.2
1,654,050	+		Echvi_1440	0.70	+0.0
1,654,051	-		Echvi_1440	0.70	-0.4
1,654,051	-		Echvi_1440	0.70	+0.5
1,654,143	+		Echvi_1440	0.79	-0.1
1,654,144	-		Echvi_1440	0.79	-0.4
1,654,144	-		Echvi_1440	0.79	+0.1
1,654,144	-		Echvi_1440	0.79	-0.4
1,654,169	-		Echvi_1440	0.81	-0.5
1,654,229	+		Echvi_1440	0.87	+1.3
1,654,230	-		Echvi_1440	0.88	+2.5
1,654,230	-		Echvi_1440	0.88	-1.7
1,654,230	-		Echvi_1440	0.88	+1.3
1,654,232	-		Echvi_1440	0.88	+0.2
1,654,248	+		Echvi_1440	0.89	-0.6
1,654,248	+		Echvi_1440	0.89	-0.2
1,654,249	-		Echvi_1440	0.89	-0.2
1,654,309	+				+0.3
1,654,319	-				+0.4
1,654,319	-				+0.1
1,654,340	+				+1.9
1,654,341	-				+1.3
1,654,341	-				-0.0
1,654,357	-				+1.0
1,654,357	-				-1.1
1,654,388	-				-0.6
1,654,390	+				-0.2
1,654,390	+				+0.3
1,654,472	-				+0.5
1,654,490	+				-0.6
1,654,568	+				-0.4
1,654,627	-				+0.2
1,654,698	+		Echvi_1441	0.16	-0.6
1,654,722	-		Echvi_1441	0.20	-0.4
1,654,755	+		Echvi_1441	0.26	+0.3
1,654,775	+		Echvi_1441	0.29	-0.5
1,654,775	+				+1.1
1,654,775	+		Echvi_1441	0.29	+1.7
1,654,779	+		Echvi_1441	0.30	-2.2
1,654,779	+		Echvi_1441	0.30	-1.6
1,654,779	+		Echvi_1441	0.30	+0.3
1,654,780	-		Echvi_1441	0.30	+1.5
1,654,792	-		Echvi_1441	0.32	+1.4
1,654,792	-		Echvi_1441	0.32	+2.1
1,654,856	+		Echvi_1441	0.42	-0.4
1,654,856	+		Echvi_1441	0.42	+0.5
1,654,856	+		Echvi_1441	0.42	-0.6
1,654,883	+		Echvi_1441	0.47	-1.3
1,654,883	+		Echvi_1441	0.47	-1.6
1,654,884	-		Echvi_1441	0.47	-0.4
1,654,884	-		Echvi_1441	0.47	+0.7
1,654,884	-		Echvi_1441	0.47	+0.4
1,654,891	+		Echvi_1441	0.48	-1.1
1,654,892	-		Echvi_1441	0.48	-0.2
1,654,892	-		Echvi_1441	0.48	-0.1
1,654,892	-		Echvi_1441	0.48	-0.3
1,654,897	+		Echvi_1441	0.49	-0.2
1,654,952	-		Echvi_1441	0.58	+2.5
1,654,971	-		Echvi_1441	0.61	-2.9
1,654,972	+		Echvi_1441	0.61	+1.5
1,654,972	+		Echvi_1441	0.61	-0.1
1,654,972	+		Echvi_1441	0.61	+1.1
1,654,973	-		Echvi_1441	0.61	+0.9
1,655,048	+		Echvi_1441	0.74	+0.1
1,655,048	+		Echvi_1441	0.74	+0.5
1,655,098	+		Echvi_1441	0.82	+1.3
1,655,099	-		Echvi_1441	0.82	+0.3
1,655,099	-		Echvi_1441	0.82	+0.4
1,655,105	+		Echvi_1441	0.83	+1.0
1,655,105	+		Echvi_1441	0.83	-0.7
1,655,105	+		Echvi_1441	0.83	+0.8
1,655,106	-		Echvi_1441	0.83	+1.6
1,655,106	-		Echvi_1441	0.83	+0.4
1,655,106	-		Echvi_1441	0.83	-2.5
1,655,106	-		Echvi_1441	0.83	-0.3
1,655,109	+		Echvi_1441	0.83	-1.0
1,655,109	+		Echvi_1441	0.83	+0.1
1,655,110	-		Echvi_1441	0.84	+0.8
1,655,110	-		Echvi_1441	0.84	-0.2
1,655,110	-		Echvi_1441	0.84	-0.9
1,655,110	-		Echvi_1441	0.84	-0.5
1,655,152	+				-0.4
1,655,158	-				-0.3
1,655,188	-				+1.0
1,655,264	-				+1.5
1,655,264	-				-0.4
1,655,276	-				+1.8
1,655,315	-				-1.4
1,655,340	+				+0.5
1,655,340	+				+0.4
1,655,340	+				-0.3
1,655,341	-				-0.1
1,655,343	+				-0.1
1,655,343	+				-0.5
1,655,348	+				+0.4
1,655,348	+				+1.5
1,655,348	+				-0.4
1,655,348	+				+0.4
1,655,349	-				+0.1
1,655,349	-				+0.2
1,655,349	-				-1.0
1,655,349	-				+2.6
1,655,349	-				+0.2
1,655,349	-				-0.3
1,655,349	-				+0.1
1,655,352	+				-2.6
1,655,353	-				-1.0
1,655,353	-				+1.2
1,655,355	-				+1.0
1,655,375	-				-0.3
1,655,375	-				-0.2
1,655,382	+				+0.4
1,655,388	+				-0.3
1,655,394	+				-0.7
1,655,394	+				-0.4
1,655,403	+				-0.6
1,655,411	+				+0.8
1,655,436	+				+1.1
1,655,437	-				+0.2
1,655,446	-				+0.7
1,655,455	+				-1.1
1,655,456	-				+1.3
1,655,456	-				-0.2
1,655,458	+				-0.1
1,655,459	-				+0.3
1,655,464	+				+0.4
1,655,464	+				-0.1
1,655,470	-				-1.8
1,655,481	+				+2.1
1,655,493	+				-1.8
1,655,519	-		Echvi_1442	0.10	-1.8
1,655,592	+		Echvi_1442	0.23	-0.3
1,655,593	-		Echvi_1442	0.23	-0.4
1,655,605	+		Echvi_1442	0.25	+0.2
1,655,641	-		Echvi_1442	0.31	-0.2
1,655,711	+		Echvi_1442	0.43	-1.4
1,655,769	-		Echvi_1442	0.53	-2.3
1,655,769	-		Echvi_1442	0.53	+0.1
1,655,769	-		Echvi_1442	0.53	+1.4
1,655,769	-		Echvi_1442	0.53	-0.6
1,655,949	-		Echvi_1442	0.84	-0.6
1,656,038	+				-0.5