Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16115 and CA264_16120 are separated by 14 nucleotides
CA264_16115: CA264_16115 - hypothetical protein, at 3,752,576 to 3,753,403
_16115
CA264_16120: CA264_16120 - sensor histidine kinase, at 3,753,418 to 3,754,467
_16120
Position (kb)
3752
3753
3754 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3751.587 kb on + strand at 3751.592 kb on - strand at 3751.616 kb on - strand at 3751.750 kb on + strand at 3751.818 kb on + strand at 3751.819 kb on - strand at 3752.003 kb on + strand at 3752.003 kb on + strand at 3752.016 kb on + strand at 3752.145 kb on - strand at 3752.164 kb on - strand at 3752.187 kb on + strand at 3752.203 kb on + strand at 3752.203 kb on + strand at 3752.204 kb on - strand at 3752.204 kb on - strand at 3752.204 kb on - strand at 3752.264 kb on + strand at 3752.330 kb on - strand at 3752.330 kb on - strand at 3752.342 kb on + strand at 3752.342 kb on + strand at 3752.342 kb on + strand at 3752.345 kb on + strand at 3752.346 kb on - strand at 3752.387 kb on + strand at 3752.387 kb on + strand at 3752.409 kb on + strand at 3752.419 kb on + strand at 3752.449 kb on + strand at 3752.450 kb on - strand at 3752.453 kb on + strand at 3752.454 kb on - strand at 3752.454 kb on - strand at 3752.454 kb on - strand at 3752.454 kb on - strand at 3752.461 kb on - strand at 3752.461 kb on - strand at 3752.466 kb on - strand at 3752.539 kb on - strand at 3752.539 kb on - strand at 3752.539 kb on - strand at 3752.549 kb on + strand at 3752.550 kb on - strand at 3752.551 kb on + strand at 3752.552 kb on - strand at 3752.559 kb on - strand at 3752.559 kb on - strand at 3752.562 kb on + strand at 3752.562 kb on + strand at 3752.563 kb on - strand at 3752.650 kb on - strand at 3752.661 kb on + strand, within CA264_16115 at 3752.688 kb on + strand, within CA264_16115 at 3752.688 kb on + strand, within CA264_16115 at 3752.770 kb on + strand, within CA264_16115 at 3753.071 kb on - strand, within CA264_16115 at 3753.073 kb on - strand, within CA264_16115 at 3753.244 kb on + strand, within CA264_16115 at 3753.244 kb on + strand, within CA264_16115 at 3753.245 kb on - strand, within CA264_16115 at 3753.288 kb on + strand, within CA264_16115 at 3753.348 kb on + strand at 3753.349 kb on - strand at 3753.445 kb on + strand at 3753.501 kb on - strand at 3753.593 kb on - strand, within CA264_16120 at 3753.596 kb on - strand, within CA264_16120 at 3753.596 kb on - strand, within CA264_16120 at 3753.712 kb on + strand, within CA264_16120 at 3753.757 kb on - strand, within CA264_16120 at 3753.806 kb on - strand, within CA264_16120 at 3753.808 kb on - strand, within CA264_16120 at 3754.226 kb on + strand, within CA264_16120 at 3754.227 kb on - strand, within CA264_16120 at 3754.230 kb on - strand, within CA264_16120 at 3754.230 kb on - strand, within CA264_16120 at 3754.230 kb on - strand, within CA264_16120 at 3754.234 kb on - strand, within CA264_16120 at 3754.236 kb on - strand, within CA264_16120 at 3754.236 kb on - strand, within CA264_16120 at 3754.364 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 3,751,587 + -0.8 3,751,592 - -1.1 3,751,616 - -0.6 3,751,750 + -0.2 3,751,818 + -0.6 3,751,819 - +0.5 3,752,003 + -0.9 3,752,003 + +0.6 3,752,016 + +0.2 3,752,145 - +0.8 3,752,164 - +0.4 3,752,187 + -0.9 3,752,203 + -0.0 3,752,203 + +0.2 3,752,204 - +0.5 3,752,204 - -0.2 3,752,204 - -1.3 3,752,264 + -0.3 3,752,330 - +0.9 3,752,330 - -0.3 3,752,342 + -0.5 3,752,342 + -0.2 3,752,342 + -0.3 3,752,345 + -0.1 3,752,346 - -1.2 3,752,387 + -1.1 3,752,387 + +0.8 3,752,409 + -0.5 3,752,419 + -0.8 3,752,449 + +0.3 3,752,450 - -0.4 3,752,453 + +1.4 3,752,454 - -0.2 3,752,454 - -0.5 3,752,454 - +0.4 3,752,454 - +0.8 3,752,461 - -0.7 3,752,461 - -0.9 3,752,466 - -0.3 3,752,539 - -0.6 3,752,539 - -0.9 3,752,539 - +0.0 3,752,549 + -0.3 3,752,550 - -0.3 3,752,551 + -0.6 3,752,552 - +0.1 3,752,559 - -0.2 3,752,559 - -0.4 3,752,562 + -0.4 3,752,562 + -0.3 3,752,563 - -0.7 3,752,650 - +1.0 3,752,661 + CA264_16115 0.10 -0.2 3,752,688 + CA264_16115 0.14 -0.2 3,752,688 + CA264_16115 0.14 -1.0 3,752,770 + CA264_16115 0.23 +0.2 3,753,071 - CA264_16115 0.60 +0.9 3,753,073 - CA264_16115 0.60 +0.1 3,753,244 + CA264_16115 0.81 -0.8 3,753,244 + CA264_16115 0.81 -0.8 3,753,245 - CA264_16115 0.81 -0.2 3,753,288 + CA264_16115 0.86 -0.3 3,753,348 + -0.9 3,753,349 - -0.0 3,753,445 + -0.4 3,753,501 - -0.3 3,753,593 - CA264_16120 0.17 +0.4 3,753,596 - CA264_16120 0.17 -0.9 3,753,596 - CA264_16120 0.17 -0.3 3,753,712 + CA264_16120 0.28 +0.2 3,753,757 - CA264_16120 0.32 -1.4 3,753,806 - CA264_16120 0.37 -1.2 3,753,808 - CA264_16120 0.37 -0.7 3,754,226 + CA264_16120 0.77 -0.6 3,754,227 - CA264_16120 0.77 -0.4 3,754,230 - CA264_16120 0.77 -0.2 3,754,230 - CA264_16120 0.77 -0.5 3,754,230 - CA264_16120 0.77 +0.8 3,754,234 - CA264_16120 0.78 -2.8 3,754,236 - CA264_16120 0.78 -1.5 3,754,236 - CA264_16120 0.78 -0.3 3,754,364 - -0.9
Or see this region's nucleotide sequence