Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13750 and CA264_13755 are separated by 401 nucleotides CA264_13755 and CA264_13760 are separated by 301 nucleotides
CA264_13750: CA264_13750 - response regulator, at 3,212,963 to 3,213,406
_13750
CA264_13755: CA264_13755 - cystathionine beta-synthase, at 3,213,808 to 3,214,791
_13755
CA264_13760: CA264_13760 - succinate--CoA ligase subunit alpha, at 3,215,093 to 3,215,983
_13760
Position (kb)
3213
3214
3215 Strain fitness (log2 ratio)
-1
0
1 at 3212.901 kb on - strand at 3212.955 kb on + strand at 3212.958 kb on - strand at 3213.046 kb on + strand, within CA264_13750 at 3213.047 kb on - strand, within CA264_13750 at 3213.060 kb on + strand, within CA264_13750 at 3213.060 kb on + strand, within CA264_13750 at 3213.103 kb on + strand, within CA264_13750 at 3213.104 kb on - strand, within CA264_13750 at 3213.104 kb on - strand, within CA264_13750 at 3213.122 kb on - strand, within CA264_13750 at 3213.122 kb on - strand, within CA264_13750 at 3213.153 kb on + strand, within CA264_13750 at 3213.221 kb on - strand, within CA264_13750 at 3213.233 kb on - strand, within CA264_13750 at 3213.260 kb on - strand, within CA264_13750 at 3213.265 kb on + strand, within CA264_13750 at 3213.267 kb on + strand, within CA264_13750 at 3213.268 kb on - strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.270 kb on - strand, within CA264_13750 at 3213.270 kb on - strand, within CA264_13750 at 3213.289 kb on + strand, within CA264_13750 at 3213.364 kb on + strand at 3213.364 kb on + strand at 3213.365 kb on - strand at 3213.407 kb on - strand at 3213.424 kb on + strand at 3213.425 kb on - strand at 3213.446 kb on - strand at 3213.598 kb on - strand at 3213.616 kb on - strand at 3213.646 kb on - strand at 3213.695 kb on + strand at 3213.695 kb on + strand at 3213.696 kb on - strand at 3213.697 kb on + strand at 3213.698 kb on - strand at 3213.705 kb on + strand at 3213.705 kb on + strand at 3213.706 kb on - strand at 3213.706 kb on - strand at 3213.732 kb on - strand at 3213.741 kb on + strand at 3213.741 kb on + strand at 3213.797 kb on + strand at 3214.169 kb on + strand, within CA264_13755 at 3214.410 kb on - strand, within CA264_13755 at 3214.726 kb on + strand at 3214.755 kb on + strand at 3214.804 kb on - strand at 3214.822 kb on + strand at 3214.831 kb on + strand at 3214.995 kb on - strand at 3214.996 kb on + strand at 3214.997 kb on - strand at 3215.000 kb on - strand at 3215.009 kb on + strand at 3215.049 kb on - strand at 3215.054 kb on - strand at 3215.054 kb on - strand at 3215.054 kb on - strand at 3215.070 kb on + strand at 3215.070 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 3,212,901 - -0.8 3,212,955 + -0.6 3,212,958 - -0.5 3,213,046 + CA264_13750 0.19 +0.1 3,213,047 - CA264_13750 0.19 -0.0 3,213,060 + CA264_13750 0.22 -0.5 3,213,060 + CA264_13750 0.22 +0.5 3,213,103 + CA264_13750 0.32 -0.2 3,213,104 - CA264_13750 0.32 -0.7 3,213,104 - CA264_13750 0.32 -1.7 3,213,122 - CA264_13750 0.36 +1.1 3,213,122 - CA264_13750 0.36 +0.1 3,213,153 + CA264_13750 0.43 +1.4 3,213,221 - CA264_13750 0.58 -0.3 3,213,233 - CA264_13750 0.61 -0.2 3,213,260 - CA264_13750 0.67 -0.9 3,213,265 + CA264_13750 0.68 -0.7 3,213,267 + CA264_13750 0.68 -0.8 3,213,268 - CA264_13750 0.69 -0.5 3,213,269 + CA264_13750 0.69 -0.4 3,213,269 + CA264_13750 0.69 -0.3 3,213,269 + CA264_13750 0.69 +0.9 3,213,270 - CA264_13750 0.69 -0.3 3,213,270 - CA264_13750 0.69 +0.8 3,213,289 + CA264_13750 0.73 -0.1 3,213,364 + +1.1 3,213,364 + -0.0 3,213,365 - -0.5 3,213,407 - +0.4 3,213,424 + -0.4 3,213,425 - -0.2 3,213,446 - -1.2 3,213,598 - +0.5 3,213,616 - -0.6 3,213,646 - +0.1 3,213,695 + +0.2 3,213,695 + -0.5 3,213,696 - -0.1 3,213,697 + -0.1 3,213,698 - -0.5 3,213,705 + -0.1 3,213,705 + +0.4 3,213,706 - -0.5 3,213,706 - -0.0 3,213,732 - -0.1 3,213,741 + +0.8 3,213,741 + -0.2 3,213,797 + -0.1 3,214,169 + CA264_13755 0.37 +0.1 3,214,410 - CA264_13755 0.61 -1.1 3,214,726 + -0.0 3,214,755 + +0.0 3,214,804 - -0.1 3,214,822 + -0.0 3,214,831 + -0.5 3,214,995 - -0.4 3,214,996 + -1.0 3,214,997 - -1.0 3,215,000 - -0.8 3,215,009 + -0.3 3,215,049 - -0.4 3,215,054 - -1.1 3,215,054 - -1.0 3,215,054 - +0.0 3,215,070 + +0.5 3,215,070 + +1.4
Or see this region's nucleotide sequence