Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03630 and CA264_03635 are separated by 212 nucleotides CA264_03635 and CA264_03640 are separated by 195 nucleotides CA264_03640 and CA264_03645 are separated by 183 nucleotides
CA264_03630: CA264_03630 - PAS domain-containing sensor histidine kinase, at 846,043 to 848,001
_03630
CA264_03635: CA264_03635 - DoxX family protein, at 848,214 to 848,666
_03635
CA264_03640: CA264_03640 - TetR family transcriptional regulator, at 848,862 to 849,434
_03640
CA264_03645: CA264_03645 - hypothetical protein, at 849,618 to 850,949
_03645
Position (kb) 848
849 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6 at 847.506 kb on + strand, within CA264_03630 at 847.726 kb on - strand, within CA264_03630 at 847.734 kb on - strand, within CA264_03630 at 847.746 kb on + strand, within CA264_03630 at 847.746 kb on + strand, within CA264_03630 at 847.763 kb on - strand, within CA264_03630 at 847.763 kb on - strand, within CA264_03630 at 847.834 kb on - strand at 847.854 kb on - strand at 847.914 kb on + strand at 847.915 kb on - strand at 847.918 kb on - strand at 847.918 kb on - strand at 847.929 kb on + strand at 847.960 kb on + strand at 847.961 kb on - strand at 847.961 kb on - strand at 848.089 kb on - strand at 848.105 kb on + strand at 848.128 kb on + strand at 848.147 kb on - strand at 848.150 kb on + strand at 848.150 kb on + strand at 848.151 kb on - strand at 848.198 kb on - strand at 848.282 kb on + strand, within CA264_03635 at 848.438 kb on + strand, within CA264_03635 at 848.552 kb on + strand, within CA264_03635 at 848.552 kb on + strand, within CA264_03635 at 848.553 kb on - strand, within CA264_03635 at 848.553 kb on - strand, within CA264_03635 at 848.553 kb on - strand, within CA264_03635 at 848.553 kb on - strand, within CA264_03635 at 848.562 kb on + strand, within CA264_03635 at 848.562 kb on + strand, within CA264_03635 at 848.692 kb on - strand at 848.695 kb on + strand at 848.696 kb on - strand at 848.696 kb on - strand at 848.696 kb on - strand at 848.699 kb on + strand at 848.700 kb on - strand at 848.700 kb on - strand at 848.700 kb on - strand at 848.700 kb on - strand at 848.707 kb on + strand at 848.707 kb on + strand at 848.809 kb on + strand at 848.810 kb on - strand at 848.810 kb on - strand at 848.818 kb on - strand at 848.939 kb on + strand, within CA264_03640 at 848.939 kb on + strand, within CA264_03640 at 848.940 kb on - strand, within CA264_03640 at 848.940 kb on - strand, within CA264_03640 at 849.113 kb on + strand, within CA264_03640 at 849.141 kb on + strand, within CA264_03640 at 849.143 kb on + strand, within CA264_03640 at 849.183 kb on - strand, within CA264_03640 at 849.183 kb on - strand, within CA264_03640 at 849.200 kb on + strand, within CA264_03640 at 849.292 kb on + strand, within CA264_03640 at 849.454 kb on + strand at 849.455 kb on - strand at 849.513 kb on + strand at 849.593 kb on - strand at 849.615 kb on + strand at 849.616 kb on - strand at 849.643 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 847,506 + CA264_03630 0.75 +3.7 847,726 - CA264_03630 0.86 +2.1 847,734 - CA264_03630 0.86 +1.4 847,746 + CA264_03630 0.87 +3.4 847,746 + CA264_03630 0.87 +3.6 847,763 - CA264_03630 0.88 +0.8 847,763 - CA264_03630 0.88 +1.2 847,834 - +0.6 847,854 - +1.3 847,914 + +3.6 847,915 - +1.9 847,918 - +2.0 847,918 - +2.4 847,929 + +3.6 847,960 + +2.0 847,961 - +1.6 847,961 - +1.0 848,089 - +3.9 848,105 + +4.9 848,128 + +4.6 848,147 - +3.3 848,150 + +5.0 848,150 + +4.5 848,151 - +4.1 848,198 - +3.5 848,282 + CA264_03635 0.15 +5.0 848,438 + CA264_03635 0.49 +3.9 848,552 + CA264_03635 0.75 +2.8 848,552 + CA264_03635 0.75 +4.0 848,553 - CA264_03635 0.75 +5.5 848,553 - CA264_03635 0.75 +5.0 848,553 - CA264_03635 0.75 +5.8 848,553 - CA264_03635 0.75 +5.0 848,562 + CA264_03635 0.77 +3.7 848,562 + CA264_03635 0.77 +4.3 848,692 - +4.7 848,695 + +3.6 848,696 - +4.5 848,696 - +4.7 848,696 - +5.4 848,699 + +3.1 848,700 - +4.7 848,700 - +4.3 848,700 - +4.9 848,700 - +4.8 848,707 + +4.2 848,707 + +3.4 848,809 + +4.2 848,810 - +4.3 848,810 - +4.5 848,818 - +4.2 848,939 + CA264_03640 0.13 +3.3 848,939 + CA264_03640 0.13 +3.7 848,940 - CA264_03640 0.14 +5.4 848,940 - CA264_03640 0.14 +5.3 849,113 + CA264_03640 0.44 +2.5 849,141 + CA264_03640 0.49 +3.5 849,143 + CA264_03640 0.49 +2.8 849,183 - CA264_03640 0.56 +5.2 849,183 - CA264_03640 0.56 +5.0 849,200 + CA264_03640 0.59 +2.3 849,292 + CA264_03640 0.75 +2.2 849,454 + +2.7 849,455 - +5.7 849,513 + +3.7 849,593 - +3.4 849,615 + +0.8 849,616 - -0.1 849,643 + +0.5
Or see this region's nucleotide sequence