Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03165

Experiment: m.b. Tetracycline 0.006 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03155 and CA264_03160 are separated by 3 nucleotidesCA264_03160 and CA264_03165 are separated by 228 nucleotidesCA264_03165 and CA264_03170 are separated by 596 nucleotides CA264_03155: CA264_03155 - hypothetical protein, at 737,482 to 738,237 _03155 CA264_03160: CA264_03160 - metallophosphoesterase, at 738,241 to 738,984 _03160 CA264_03165: CA264_03165 - acyl-CoA desaturase, at 739,213 to 740,283 _03165 CA264_03170: CA264_03170 - hypothetical protein, at 740,880 to 741,110 _03170 Position (kb) 739 740 741Strain fitness (log2 ratio) -2 -1 0 1at 738.215 kb on + strandat 738.215 kb on + strandat 738.233 kb on + strandat 738.234 kb on - strandat 738.240 kb on + strandat 738.240 kb on + strandat 738.241 kb on - strandat 738.241 kb on - strandat 738.282 kb on - strandat 738.289 kb on - strandat 738.289 kb on - strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.328 kb on + strand, within CA264_03160at 738.396 kb on + strand, within CA264_03160at 738.475 kb on + strand, within CA264_03160at 738.666 kb on - strand, within CA264_03160at 738.748 kb on + strand, within CA264_03160at 738.967 kb on + strandat 738.968 kb on - strandat 738.970 kb on - strandat 739.000 kb on + strandat 739.001 kb on - strandat 739.023 kb on + strandat 739.043 kb on + strandat 739.069 kb on - strandat 739.069 kb on - strandat 739.072 kb on + strandat 739.120 kb on + strandat 739.123 kb on - strandat 739.133 kb on + strandat 739.140 kb on + strandat 739.140 kb on + strandat 739.140 kb on + strandat 739.169 kb on + strandat 739.169 kb on + strandat 739.191 kb on + strandat 739.213 kb on - strandat 739.283 kb on - strandat 739.319 kb on - strandat 739.320 kb on + strand, within CA264_03165at 739.320 kb on + strand, within CA264_03165at 739.321 kb on - strand, within CA264_03165at 739.343 kb on + strand, within CA264_03165at 739.348 kb on - strand, within CA264_03165at 739.368 kb on - strand, within CA264_03165at 739.374 kb on - strand, within CA264_03165at 739.569 kb on + strand, within CA264_03165at 739.584 kb on - strand, within CA264_03165at 739.597 kb on + strand, within CA264_03165at 739.598 kb on - strand, within CA264_03165at 739.607 kb on + strand, within CA264_03165at 739.607 kb on + strand, within CA264_03165at 739.607 kb on + strand, within CA264_03165at 739.608 kb on - strand, within CA264_03165at 739.763 kb on - strand, within CA264_03165at 739.783 kb on - strand, within CA264_03165at 739.822 kb on - strand, within CA264_03165at 739.836 kb on + strand, within CA264_03165at 739.876 kb on + strand, within CA264_03165at 739.877 kb on - strand, within CA264_03165at 739.929 kb on - strand, within CA264_03165at 739.948 kb on - strand, within CA264_03165at 740.007 kb on + strand, within CA264_03165at 740.215 kb on - strandat 740.296 kb on + strandat 740.296 kb on + strandat 740.335 kb on + strandat 740.342 kb on + strandat 740.343 kb on - strandat 740.423 kb on + strandat 740.424 kb on - strandat 740.456 kb on - strandat 740.518 kb on + strandat 740.518 kb on + strandat 740.519 kb on - strandat 740.519 kb on - strandat 740.520 kb on + strandat 740.523 kb on + strandat 740.535 kb on - strandat 740.541 kb on + strandat 740.698 kb on - strandat 740.710 kb on - strandat 740.898 kb on - strandat 740.939 kb on - strand, within CA264_03170at 740.971 kb on + strand, within CA264_03170at 741.066 kb on + strand, within CA264_03170at 741.119 kb on + strandat 741.119 kb on + strandat 741.120 kb on - strandat 741.120 kb on - strandat 741.122 kb on + strandat 741.122 kb on + strandat 741.122 kb on + strandat 741.129 kb on + strandat 741.129 kb on + strandat 741.130 kb on - strandat 741.131 kb on + strandat 741.134 kb on + strandat 741.134 kb on + strandat 741.135 kb on - strandat 741.135 kb on - strandat 741.154 kb on - strandat 741.154 kb on - strandat 741.161 kb on + strandat 741.172 kb on + strandat 741.172 kb on + strandat 741.190 kb on + strandat 741.225 kb on - strandat 741.270 kb on + strandat 741.274 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml
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738,215 + -1.8
738,215 + -0.5
738,233 + +0.2
738,234 - -0.7
738,240 + -1.2
738,240 + -0.9
738,241 - -0.6
738,241 - -0.9
738,282 - -1.6
738,289 - -0.8
738,289 - -1.0
738,290 + +1.4
738,290 + -0.3
738,290 + -0.7
738,290 + +0.6
738,290 + -0.5
738,290 + -1.0
738,290 + -1.2
738,291 - -0.6
738,291 - -0.7
738,291 - -1.1
738,291 - -0.6
738,291 - -1.7
738,291 - -0.3
738,291 - +0.1
738,328 + CA264_03160 0.12 +0.4
738,396 + CA264_03160 0.21 -0.1
738,475 + CA264_03160 0.31 +0.5
738,666 - CA264_03160 0.57 +0.2
738,748 + CA264_03160 0.68 -1.2
738,967 + -0.5
738,968 - -0.0
738,970 - +1.1
739,000 + -0.8
739,001 - +1.1
739,023 + +1.7
739,043 + -1.3
739,069 - -0.4
739,069 - -0.3
739,072 + -0.7
739,120 + +0.5
739,123 - -0.8
739,133 + -0.7
739,140 + -1.0
739,140 + -0.6
739,140 + -0.8
739,169 + +0.3
739,169 + +1.4
739,191 + -0.5
739,213 - +0.0
739,283 - -0.1
739,319 - -1.2
739,320 + CA264_03165 0.10 +0.6
739,320 + CA264_03165 0.10 +0.8
739,321 - CA264_03165 0.10 -0.7
739,343 + CA264_03165 0.12 +0.6
739,348 - CA264_03165 0.13 +1.4
739,368 - CA264_03165 0.14 +0.3
739,374 - CA264_03165 0.15 +0.4
739,569 + CA264_03165 0.33 +0.7
739,584 - CA264_03165 0.35 +0.2
739,597 + CA264_03165 0.36 -0.3
739,598 - CA264_03165 0.36 +0.1
739,607 + CA264_03165 0.37 -0.1
739,607 + CA264_03165 0.37 +0.2
739,607 + CA264_03165 0.37 -0.8
739,608 - CA264_03165 0.37 +0.0
739,763 - CA264_03165 0.51 -0.2
739,783 - CA264_03165 0.53 -0.4
739,822 - CA264_03165 0.57 +0.4
739,836 + CA264_03165 0.58 +0.2
739,876 + CA264_03165 0.62 -0.1
739,877 - CA264_03165 0.62 -0.0
739,929 - CA264_03165 0.67 -0.4
739,948 - CA264_03165 0.69 +0.1
740,007 + CA264_03165 0.74 -0.4
740,215 - +0.3
740,296 + +0.7
740,296 + +0.2
740,335 + -0.2
740,342 + -0.5
740,343 - +1.4
740,423 + -0.4
740,424 - -1.4
740,456 - +0.8
740,518 + +1.1
740,518 + +0.1
740,519 - +0.5
740,519 - -0.9
740,520 + -0.9
740,523 + +0.2
740,535 - -0.7
740,541 + +0.3
740,698 - +0.5
740,710 - -0.6
740,898 - -0.0
740,939 - CA264_03170 0.26 -0.2
740,971 + CA264_03170 0.39 -0.2
741,066 + CA264_03170 0.81 -0.4
741,119 + -0.7
741,119 + -0.7
741,120 - -0.8
741,120 - +0.2
741,122 + -0.7
741,122 + -0.3
741,122 + +0.3
741,129 + -0.9
741,129 + +0.4
741,130 - -0.8
741,131 + -0.3
741,134 + +0.8
741,134 + -0.3
741,135 - +0.1
741,135 - +0.0
741,154 - -1.2
741,154 - -0.6
741,161 + -0.7
741,172 + -0.8
741,172 + +0.5
741,190 + +0.4
741,225 - -1.0
741,270 + -1.4
741,274 + -1.1

Or see this region's nucleotide sequence