Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00825 and CA264_00830 are separated by 252 nucleotides CA264_00830 and CA264_00835 are separated by 205 nucleotides CA264_00835 and CA264_00840 are separated by 84 nucleotides
CA264_00825: CA264_00825 - methyltransferase, at 176,652 to 177,368
_00825
CA264_00830: CA264_00830 - ribonuclease HI, at 177,621 to 178,091
_00830
CA264_00835: CA264_00835 - hypothetical protein, at 178,297 to 178,857
_00835
CA264_00840: CA264_00840 - phosphoserine aminotransferase, at 178,942 to 180,003
_00840
Position (kb) 178
179 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 177.320 kb on + strand at 177.320 kb on + strand at 177.356 kb on - strand at 177.491 kb on + strand at 177.491 kb on + strand at 177.537 kb on + strand at 177.538 kb on - strand at 177.538 kb on - strand at 177.559 kb on + strand at 177.593 kb on + strand at 177.594 kb on - strand at 177.622 kb on + strand at 177.641 kb on - strand at 178.081 kb on - strand at 178.081 kb on - strand at 178.123 kb on + strand at 178.161 kb on + strand at 178.162 kb on - strand at 178.170 kb on + strand at 178.170 kb on + strand at 178.170 kb on + strand at 178.170 kb on + strand at 178.171 kb on - strand at 178.177 kb on - strand at 178.198 kb on + strand at 178.199 kb on - strand at 178.215 kb on + strand at 178.259 kb on - strand at 178.291 kb on + strand at 178.301 kb on - strand at 178.414 kb on + strand, within CA264_00835 at 178.418 kb on - strand, within CA264_00835 at 178.425 kb on - strand, within CA264_00835 at 178.454 kb on - strand, within CA264_00835 at 178.456 kb on + strand, within CA264_00835 at 178.457 kb on - strand, within CA264_00835 at 178.457 kb on - strand, within CA264_00835 at 178.475 kb on + strand, within CA264_00835 at 178.623 kb on + strand, within CA264_00835 at 178.623 kb on + strand, within CA264_00835 at 178.800 kb on + strand, within CA264_00835 at 178.847 kb on - strand at 178.883 kb on + strand at 178.883 kb on + strand at 178.929 kb on + strand at 178.929 kb on + strand at 178.930 kb on - strand at 178.930 kb on - strand at 178.932 kb on - strand at 178.938 kb on + strand at 178.938 kb on + strand at 178.939 kb on - strand at 178.939 kb on - strand at 178.939 kb on - strand at 178.939 kb on - strand at 178.940 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 177,320 + +1.0 177,320 + +0.9 177,356 - -1.2 177,491 + +0.2 177,491 + -0.4 177,537 + -0.5 177,538 - -1.5 177,538 - -0.2 177,559 + -0.3 177,593 + +0.1 177,594 - -0.9 177,622 + -0.3 177,641 - -0.6 178,081 - -2.8 178,081 - -1.0 178,123 + +0.2 178,161 + -0.2 178,162 - -0.4 178,170 + +0.4 178,170 + -0.1 178,170 + +0.1 178,170 + -0.7 178,171 - +0.1 178,177 - +0.1 178,198 + +0.3 178,199 - -0.3 178,215 + -0.1 178,259 - -0.9 178,291 + +0.6 178,301 - +0.5 178,414 + CA264_00835 0.21 +1.7 178,418 - CA264_00835 0.22 -0.4 178,425 - CA264_00835 0.23 +0.4 178,454 - CA264_00835 0.28 +0.5 178,456 + CA264_00835 0.28 -0.0 178,457 - CA264_00835 0.29 -0.8 178,457 - CA264_00835 0.29 +1.0 178,475 + CA264_00835 0.32 -0.0 178,623 + CA264_00835 0.58 -0.3 178,623 + CA264_00835 0.58 +0.1 178,800 + CA264_00835 0.90 -2.0 178,847 - +0.9 178,883 + -1.2 178,883 + +0.1 178,929 + -0.9 178,929 + -1.1 178,930 - -1.7 178,930 - -1.0 178,932 - -1.1 178,938 + -1.4 178,938 + -0.4 178,939 - -1.5 178,939 - -0.3 178,939 - -2.0 178,939 - -0.7 178,940 + -0.3
Or see this region's nucleotide sequence