Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS30460

Experiment: NAG (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C); with MOPS
1,603,799	+				+2.0
1,603,799	+				-0.5
1,603,799	+				+0.6
1,603,799	+				-0.2
1,603,799	+				+1.3
1,603,799	+				+0.2
1,603,799	+				+0.7
1,603,799	+				-0.2
1,603,800	-				-0.2
1,603,800	-				-0.7
1,603,800	-				+0.1
1,603,800	-				+0.1
1,603,800	-				+0.4
1,603,800	-				+0.4
1,603,822	+				+0.4
1,603,822	+				-1.0
1,603,823	-				+0.5
1,603,874	+				-0.7
1,603,874	+				-1.0
1,603,874	+				-1.7
1,603,874	+				-0.1
1,603,874	+				+0.4
1,603,875	-				+1.0
1,603,875	-				-1.7
1,603,875	-				+2.6
1,603,875	-				+0.4
1,603,875	-				+0.2
1,603,875	-				+0.1
1,603,875	-				-0.2
1,603,875	-				+1.2
1,603,876	+				+0.0
1,603,876	+				-0.0
1,603,876	+				-2.0
1,603,876	+				+0.5
1,603,876	+				-0.2
1,603,876	+				-0.4
1,603,876	+				-0.6
1,603,876	+				-0.0
1,603,876	+				+1.0
1,603,876	+				-0.2
1,603,876	+				-0.3
1,603,876	+				+1.8
1,603,876	+				+1.1
1,603,876	+				-0.1
1,603,876	+				-0.7
1,603,876	+				+0.1
1,603,876	+				+2.0
1,603,876	+				+0.7
1,603,876	+				-0.6
1,603,877	-				+1.9
1,603,877	-				-1.1
1,603,877	-				-0.2
1,603,877	-				+0.6
1,603,877	-				-0.8
1,603,877	-				-0.6
1,603,877	-				+0.5
1,603,877	-				+2.0
1,603,877	-				+1.1
1,603,877	-				+0.3
1,603,877	-				+1.8
1,604,001	-		PFLU_RS07180	0.38	+1.8
1,604,034	-		PFLU_RS07180	0.51	+1.8
1,604,156	+				-0.9
1,604,156	+				-2.0
1,604,156	+				-0.4
1,604,157	-				+0.4
1,604,157	-				-0.8
1,604,157	-				-0.2
1,604,157	-				-0.2
1,604,157	-				-0.3
1,604,206	-		PFLU_RS07185	0.14	+1.2
1,604,206	-		PFLU_RS07185	0.14	-1.1
1,604,259	+		PFLU_RS07185	0.26	+1.3
1,604,259	+		PFLU_RS07185	0.26	+0.2
1,604,259	+		PFLU_RS07185	0.26	+0.2
1,604,259	+		PFLU_RS07185	0.26	+0.2
1,604,259	+		PFLU_RS07185	0.26	+0.5
1,604,260	-		PFLU_RS07185	0.26	+0.7
1,604,260	-		PFLU_RS07185	0.26	-0.6
1,604,260	-		PFLU_RS07185	0.26	+0.7
1,604,260	-		PFLU_RS07185	0.26	-1.0
1,604,260	-		PFLU_RS07185	0.26	+0.6
1,604,260	-		PFLU_RS07185	0.26	+0.9
1,604,281	+		PFLU_RS07185	0.31	+2.1
1,604,281	+		PFLU_RS07185	0.31	+0.3
1,604,281	+		PFLU_RS07185	0.31	+0.2
1,604,281	+		PFLU_RS07185	0.31	-0.1
1,604,282	-		PFLU_RS07185	0.31	+0.6
1,604,282	-		PFLU_RS07185	0.31	-1.8
1,604,282	-		PFLU_RS07185	0.31	-1.1
1,604,282	-		PFLU_RS07185	0.31	+1.0
1,604,319	-		PFLU_RS07185	0.40	-0.2
1,604,449	+		PFLU_RS07185	0.69	+1.3
1,604,449	+		PFLU_RS07185	0.69	-0.1
1,604,460	+		PFLU_RS07185	0.71	+0.5
1,604,460	+		PFLU_RS07185	0.71	+0.3
1,604,527	+		PFLU_RS07185	0.86	-0.3
1,604,528	-		PFLU_RS07185	0.86	-1.7
1,604,528	-		PFLU_RS07185	0.86	-0.5
1,604,528	-		PFLU_RS07185	0.86	+1.6
1,604,528	-		PFLU_RS07185	0.86	-0.3
1,604,528	-		PFLU_RS07185	0.86	+1.0
1,604,528	-		PFLU_RS07185	0.86	+0.8
1,604,528	-		PFLU_RS07185	0.86	+0.1
1,604,528	-		PFLU_RS07185	0.86	-0.4
1,604,567	+				+0.2
1,604,567	+				+1.1
1,604,567	+				-1.8
1,604,567	+				-0.5
1,604,567	+				+0.6
1,604,568	-				-0.2
1,604,568	-				-2.4
1,604,586	+				-0.1
1,604,586	+				-0.9
1,604,587	-				-1.2
1,604,618	+		PFLU_RS30460	0.32	+1.8
1,604,630	+		PFLU_RS30460	0.38	-0.0
1,604,630	+		PFLU_RS30460	0.38	+0.4
1,604,630	+		PFLU_RS30460	0.38	-0.8
1,604,630	+		PFLU_RS30460	0.38	-0.0
1,604,630	+		PFLU_RS30460	0.38	+1.2
1,604,631	-		PFLU_RS30460	0.39	+0.4
1,604,631	-		PFLU_RS30460	0.39	+0.4
1,604,631	-		PFLU_RS30460	0.39	-0.8
1,604,631	-		PFLU_RS30460	0.39	+0.3
1,604,631	-		PFLU_RS30460	0.39	+0.7
1,604,631	-		PFLU_RS30460	0.39	-0.4
1,604,631	-		PFLU_RS30460	0.39	+0.9
1,604,732	+				-0.7
1,604,732	+				+0.1
1,604,732	+				-1.8
1,604,732	+				-1.4
1,604,732	+				-0.4
1,604,732	+				+1.1
1,604,733	-				-0.7
1,604,733	-				-0.7
1,604,733	-				+0.4
1,604,733	-				+0.9
1,604,733	-				+1.2
1,604,733	-				+0.2
1,604,741	+				+1.5
1,604,741	+				+0.3
1,604,741	+				+0.8
1,604,741	+				+0.5
1,604,741	+				+2.3
1,604,741	+				-0.0
1,604,741	+				-1.4
1,604,741	+				-1.9
1,604,741	+				-0.4
1,604,742	-				-0.2
1,604,742	-				-0.2
1,604,742	-				-0.3
1,604,742	-				-0.0
1,604,742	-				+1.2
1,604,754	+				-0.2
1,604,754	+				+0.1
1,604,754	+				-0.2
1,604,754	+				+2.0
1,604,755	-				+0.2
1,604,832	+				-2.1
1,604,879	+				+1.0
1,604,879	+				-0.5
1,604,879	+				+1.2
1,604,880	-				-0.1
1,604,882	+				-0.9
1,604,882	+				+1.8
1,604,882	+				+0.5
1,604,882	+				+0.3
1,604,882	+				-0.7
1,604,882	+				+1.0
1,604,883	-				-0.4
1,604,883	-				+0.1
1,604,883	-				+1.2
1,605,000	-		PFLU_RS07190	0.14	-1.4
1,605,065	+		PFLU_RS07190	0.19	+0.2
1,605,065	+		PFLU_RS07190	0.19	+0.4
1,605,065	+		PFLU_RS07190	0.19	-0.2
1,605,065	+		PFLU_RS07190	0.19	-1.4
1,605,065	+		PFLU_RS07190	0.19	+0.3
1,605,065	+		PFLU_RS07190	0.19	-1.5
1,605,066	-		PFLU_RS07190	0.19	+1.8
1,605,162	+		PFLU_RS07190	0.26	+0.9
1,605,197	-		PFLU_RS07190	0.28	+0.5
1,605,232	+		PFLU_RS07190	0.30	+0.5
1,605,232	+		PFLU_RS07190	0.30	+0.1
1,605,233	-		PFLU_RS07190	0.31	+1.1
1,605,233	-		PFLU_RS07190	0.31	+0.9
1,605,233	-		PFLU_RS07190	0.31	-0.4
1,605,233	-		PFLU_RS07190	0.31	-0.3
1,605,319	+		PFLU_RS07190	0.37	+0.4
1,605,319	+		PFLU_RS07190	0.37	-0.0
1,605,319	+		PFLU_RS07190	0.37	+0.2
1,605,319	+		PFLU_RS07190	0.37	+0.6
1,605,319	+		PFLU_RS07190	0.37	-0.2
1,605,319	+		PFLU_RS07190	0.37	+0.1
1,605,319	+		PFLU_RS07190	0.37	+1.9
1,605,319	+		PFLU_RS07190	0.37	+1.4
1,605,319	+		PFLU_RS07190	0.37	-0.9
1,605,319	+		PFLU_RS07190	0.37	-0.7
1,605,319	+		PFLU_RS07190	0.37	+1.0
1,605,319	+		PFLU_RS07190	0.37	-0.1
1,605,319	+		PFLU_RS07190	0.37	+0.5
1,605,319	+		PFLU_RS07190	0.37	+1.1
1,605,319	+		PFLU_RS07190	0.37	+0.2
1,605,319	+		PFLU_RS07190	0.37	+1.2
1,605,320	-		PFLU_RS07190	0.37	+1.4
1,605,320	-		PFLU_RS07190	0.37	+1.4
1,605,320	-		PFLU_RS07190	0.37	+1.3
1,605,320	-		PFLU_RS07190	0.37	-1.7
1,605,320	-		PFLU_RS07190	0.37	-0.6
1,605,320	-		PFLU_RS07190	0.37	+0.7
1,605,320	-		PFLU_RS07190	0.37	+0.8
1,605,320	-		PFLU_RS07190	0.37	+0.1
1,605,320	-		PFLU_RS07190	0.37	-0.5
1,605,320	-		PFLU_RS07190	0.37	+0.8
1,605,320	-		PFLU_RS07190	0.37	+0.3
1,605,320	-		PFLU_RS07190	0.37	-1.0
1,605,320	-		PFLU_RS07190	0.37	+2.3
1,605,320	-		PFLU_RS07190	0.37	-0.2
1,605,320	-		PFLU_RS07190	0.37	-0.4
1,605,320	-		PFLU_RS07190	0.37	-0.5
1,605,320	-		PFLU_RS07190	0.37	+0.7
1,605,320	-		PFLU_RS07190	0.37	+1.2
1,605,320	-		PFLU_RS07190	0.37	+0.3
1,605,320	-		PFLU_RS07190	0.37	-0.1
1,605,320	-		PFLU_RS07190	0.37	+1.0
1,605,320	-		PFLU_RS07190	0.37	-0.2
1,605,320	-		PFLU_RS07190	0.37	-0.8
1,605,320	-		PFLU_RS07190	0.37	+0.6
1,605,321	+		PFLU_RS07190	0.37	-0.5
1,605,321	+		PFLU_RS07190	0.37	+1.2
1,605,321	+		PFLU_RS07190	0.37	+1.1
1,605,321	+		PFLU_RS07190	0.37	+0.4
1,605,321	+		PFLU_RS07190	0.37	+1.3
1,605,321	+		PFLU_RS07190	0.37	-0.3
1,605,322	-		PFLU_RS07190	0.37	-1.4
1,605,322	-		PFLU_RS07190	0.37	+0.5
1,605,322	-		PFLU_RS07190	0.37	+0.8
1,605,322	-		PFLU_RS07190	0.37	-1.8
1,605,322	-		PFLU_RS07190	0.37	-0.1
1,605,322	-		PFLU_RS07190	0.37	-0.8
1,605,327	+		PFLU_RS07190	0.37	-0.9
1,605,327	+		PFLU_RS07190	0.37	-0.5
1,605,327	+		PFLU_RS07190	0.37	+0.3
1,605,328	-		PFLU_RS07190	0.37	-0.8
1,605,371	+		PFLU_RS07190	0.40	-2.6
1,605,371	+		PFLU_RS07190	0.40	-3.6
1,605,371	+		PFLU_RS07190	0.40	+1.1
1,605,371	+		PFLU_RS07190	0.40	-0.9
1,605,371	+		PFLU_RS07190	0.40	+1.1
1,605,371	+		PFLU_RS07190	0.40	+0.1
1,605,371	+		PFLU_RS07190	0.40	-0.2
1,605,371	+		PFLU_RS07190	0.40	+0.5
1,605,371	+		PFLU_RS07190	0.40	+0.1
1,605,371	+		PFLU_RS07190	0.40	-1.7
1,605,371	+		PFLU_RS07190	0.40	-0.1
1,605,372	-		PFLU_RS07190	0.40	-0.9
1,605,372	-		PFLU_RS07190	0.40	-0.9
1,605,372	-		PFLU_RS07190	0.40	+0.4
1,605,372	-		PFLU_RS07190	0.40	-1.1
1,605,372	-		PFLU_RS07190	0.40	+0.7
1,605,372	-		PFLU_RS07190	0.40	+0.2
1,605,372	-		PFLU_RS07190	0.40	+0.0
1,605,372	-		PFLU_RS07190	0.40	+1.0
1,605,372	-		PFLU_RS07190	0.40	+0.2
1,605,372	-		PFLU_RS07190	0.40	+0.3
1,605,372	-		PFLU_RS07190	0.40	-0.5
1,605,372	-		PFLU_RS07190	0.40	-0.1
1,605,439	+		PFLU_RS07190	0.45	-0.3
1,605,440	-		PFLU_RS07190	0.45	-0.8
1,605,544	+		PFLU_RS07190	0.52	+0.7
1,605,544	+		PFLU_RS07190	0.52	+1.8
1,605,544	+		PFLU_RS07190	0.52	+0.2
1,605,544	+		PFLU_RS07190	0.52	+2.4
1,605,544	+		PFLU_RS07190	0.52	+0.7
1,605,545	-		PFLU_RS07190	0.52	+0.9
1,605,549	+		PFLU_RS07190	0.52	-1.8
1,605,549	+		PFLU_RS07190	0.52	-2.1
1,605,549	+		PFLU_RS07190	0.52	+0.9
1,605,549	+		PFLU_RS07190	0.52	-1.2
1,605,549	+		PFLU_RS07190	0.52	+0.4
1,605,549	+		PFLU_RS07190	0.52	+0.7
1,605,550	-		PFLU_RS07190	0.53	+0.8
1,605,550	-		PFLU_RS07190	0.53	+0.4
1,605,550	-		PFLU_RS07190	0.53	+1.5
1,605,550	-		PFLU_RS07190	0.53	+0.4
1,605,550	-		PFLU_RS07190	0.53	-0.3
1,605,562	-		PFLU_RS07190	0.53	-1.3
1,605,597	-		PFLU_RS07190	0.56	-1.7
1,605,597	-		PFLU_RS07190	0.56	+1.8
1,605,630	+		PFLU_RS07190	0.58	-1.5
1,605,630	+		PFLU_RS07190	0.58	+0.4
1,605,630	+		PFLU_RS07190	0.58	+1.4
1,605,630	+		PFLU_RS07190	0.58	+1.2
1,605,630	+		PFLU_RS07190	0.58	+1.5
1,605,631	-		PFLU_RS07190	0.58	-0.3
1,605,678	+		PFLU_RS07190	0.61	-0.9
1,605,678	+		PFLU_RS07190	0.61	+1.2
1,605,678	+		PFLU_RS07190	0.61	+0.5
1,605,678	+		PFLU_RS07190	0.61	+0.2
1,605,678	+		PFLU_RS07190	0.61	-1.0
1,605,678	+		PFLU_RS07190	0.61	-0.1
1,605,678	+		PFLU_RS07190	0.61	+0.7
1,605,679	-		PFLU_RS07190	0.61	-1.8
1,605,679	-		PFLU_RS07190	0.61	-2.4
1,605,679	-		PFLU_RS07190	0.61	+0.7
1,605,679	-		PFLU_RS07190	0.61	+0.6
1,605,679	-		PFLU_RS07190	0.61	-1.6
1,605,679	-		PFLU_RS07190	0.61	-0.4
1,605,679	-		PFLU_RS07190	0.61	+0.5