Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS04770

Experiment: NAG (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C); with MOPS
1,065,663	+		PFLU_RS04760	0.79	+1.1
1,065,663	+		PFLU_RS04760	0.79	-0.7
1,065,664	-		PFLU_RS04760	0.79	+1.1
1,065,664	-		PFLU_RS04760	0.79	+1.2
1,065,670	-		PFLU_RS04760	0.80	-1.9
1,065,801	+		PFLU_RS04760	0.89	+1.2
1,065,802	-		PFLU_RS04760	0.89	-0.4
1,065,858	+				+1.0
1,065,858	+				+1.3
1,065,858	+				-1.3
1,065,858	+				-1.8
1,065,858	+				-1.4
1,065,859	-				+0.7
1,065,859	-				+1.3
1,065,859	-				+0.4
1,065,859	-				+0.8
1,065,937	+				-1.3
1,065,979	+				+0.4
1,065,979	+				-1.6
1,065,979	+				+1.0
1,065,979	+				-0.3
1,065,979	+				+0.0
1,065,980	-				+0.7
1,065,980	-				-0.4
1,065,980	-				+1.9
1,065,980	-				+0.1
1,066,340	-		PFLU_RS04765	0.58	+0.3
1,066,340	-		PFLU_RS04765	0.58	-2.6
1,066,340	-		PFLU_RS04765	0.58	+0.2
1,066,495	+		PFLU_RS04765	0.81	+0.6
1,066,495	-		PFLU_RS04765	0.81	-0.9
1,066,496	-		PFLU_RS04765	0.81	+0.3
1,066,553	+		PFLU_RS04765	0.89	+0.5
1,066,555	+		PFLU_RS04765	0.89	-1.6
1,066,555	+		PFLU_RS04765	0.89	-1.1
1,066,555	+		PFLU_RS04765	0.89	+1.6
1,066,555	+		PFLU_RS04765	0.89	-0.2
1,066,555	+		PFLU_RS04765	0.89	+0.4
1,066,556	-		PFLU_RS04765	0.89	+0.1
1,066,556	-		PFLU_RS04765	0.89	+1.5
1,066,585	+				-2.5
1,066,585	+				+1.4
1,066,585	+				-2.1
1,066,586	-				-0.1
1,066,713	+				+0.4
1,066,714	-				+1.8
1,066,714	-				+0.1
1,066,719	+				+0.2
1,066,719	+				+2.0
1,066,719	+				+1.9
1,066,719	+				+0.2
1,066,719	+				+0.3
1,066,719	+				+0.5
1,066,719	+				-1.9
1,066,719	+				+2.3
1,066,719	+				+0.4
1,066,719	+				-0.1
1,066,719	+				-0.2
1,066,719	+				+0.1
1,066,719	+				+1.2
1,066,719	+				-0.8
1,066,719	+				-0.4
1,066,719	+				+0.7
1,066,719	+				-0.1
1,066,719	+				+0.3
1,066,719	+				-1.1
1,066,719	+				-2.4
1,066,719	+				+1.7
1,066,719	+				+0.1
1,066,719	+				-0.3
1,066,719	+				-0.9
1,066,719	+				-0.8
1,066,719	+				-0.3
1,066,719	+				-0.5
1,066,719	+				+1.2
1,066,719	+				-0.1
1,066,719	+				-0.2
1,066,719	+				-1.2
1,066,719	+				-0.3
1,066,719	+				+0.5
1,066,719	+				-0.1
1,066,719	+				-2.1
1,066,719	+				+1.2
1,066,719	+				+1.3
1,066,719	+				-1.2
1,066,720	-				+0.6
1,066,720	-				-0.7
1,066,720	-				-2.3
1,066,720	-				+0.2
1,066,720	-				+0.4
1,066,720	-				+0.4
1,066,720	-				-0.2
1,066,720	-				+0.4
1,066,720	-				-0.1
1,066,720	-				-0.9
1,066,720	-				-0.7
1,066,720	-				+1.5
1,066,720	-				+2.2
1,066,720	-				+1.7
1,066,720	-				+1.4
1,066,720	-				+1.1
1,066,720	-				+1.4
1,066,720	-				-0.8
1,066,720	-				-2.6
1,066,720	-				+0.2
1,066,720	-				+1.5
1,066,720	-				+0.8
1,066,720	-				-0.3
1,066,720	-				+0.0
1,066,720	-				-1.3
1,066,720	-				+0.8
1,066,720	-				-1.6
1,066,721	+				+1.8
1,066,721	+				-0.3
1,066,721	+				+0.5
1,066,721	+				-0.8
1,066,721	+				-1.2
1,066,721	+				+0.3
1,066,721	+				-0.3
1,066,721	+				-1.8
1,066,722	-				+0.6
1,066,722	-				+0.4
1,066,722	-				+0.8
1,066,722	-				+0.5
1,066,722	-				+0.4
1,066,722	-				+0.5
1,066,722	-				+1.0
1,066,722	-				-3.0
1,066,784	-				-1.0
1,066,902	+				+0.5
1,066,902	+				+1.4
1,066,902	+				-1.6
1,066,902	+				-1.0
1,066,902	+				+0.3
1,066,902	+				+1.0
1,066,902	+				-0.6
1,066,902	+				-1.8
1,066,902	+				-0.4
1,066,902	+				-0.4
1,066,903	-				+1.2
1,066,903	-				+0.2
1,066,903	-				+1.2
1,066,903	-				-0.9
1,066,903	-				-1.1
1,066,903	-				-0.9
1,066,903	-				+0.8
1,067,121	+		PFLU_RS04770	0.15	+1.3
1,067,121	+		PFLU_RS04770	0.15	-2.2
1,067,121	+		PFLU_RS04770	0.15	-2.7
1,067,121	+		PFLU_RS04770	0.15	-0.2
1,067,121	+		PFLU_RS04770	0.15	+0.1
1,067,122	-		PFLU_RS04770	0.15	+1.1
1,067,122	-		PFLU_RS04770	0.15	-1.8
1,067,122	-		PFLU_RS04770	0.15	-2.0
1,067,122	-		PFLU_RS04770	0.15	+0.7
1,067,122	-		PFLU_RS04770	0.15	-0.3
1,067,122	-		PFLU_RS04770	0.15	+1.4
1,067,142	+		PFLU_RS04770	0.16	+0.5
1,067,142	+		PFLU_RS04770	0.16	-0.2
1,067,142	+		PFLU_RS04770	0.16	-0.9
1,067,142	+		PFLU_RS04770	0.16	-0.2
1,067,142	+		PFLU_RS04770	0.16	-0.6
1,067,142	+		PFLU_RS04770	0.16	-1.2
1,067,143	-		PFLU_RS04770	0.16	+2.6
1,067,143	-		PFLU_RS04770	0.16	+0.3
1,067,143	-		PFLU_RS04770	0.16	+1.2
1,067,143	-		PFLU_RS04770	0.16	-0.3
1,067,143	-		PFLU_RS04770	0.16	+1.3
1,067,439	+		PFLU_RS04770	0.25	+0.8
1,067,439	+		PFLU_RS04770	0.25	+0.1
1,067,440	-		PFLU_RS04770	0.25	-1.2
1,067,440	-		PFLU_RS04770	0.25	+1.3
1,067,445	+		PFLU_RS04770	0.26	+0.5
1,067,445	+		PFLU_RS04770	0.26	-0.1
1,067,445	+		PFLU_RS04770	0.26	+0.2
1,067,445	+		PFLU_RS04770	0.26	+0.1
1,067,445	+		PFLU_RS04770	0.26	+0.9
1,067,445	+		PFLU_RS04770	0.26	+0.6
1,067,445	+		PFLU_RS04770	0.26	+0.9
1,067,445	+		PFLU_RS04770	0.26	+0.7
1,067,445	+		PFLU_RS04770	0.26	-0.2
1,067,446	-		PFLU_RS04770	0.26	+0.7
1,067,446	-		PFLU_RS04770	0.26	-0.2
1,067,446	-		PFLU_RS04770	0.26	+1.4
1,067,446	-		PFLU_RS04770	0.26	+0.3
1,067,446	-		PFLU_RS04770	0.26	+0.9
1,067,446	-		PFLU_RS04770	0.26	+0.5
1,067,446	-		PFLU_RS04770	0.26	+0.7
1,067,446	-		PFLU_RS04770	0.26	-0.2
1,067,446	-		PFLU_RS04770	0.26	+1.6
1,067,446	-		PFLU_RS04770	0.26	+0.3
1,067,446	-		PFLU_RS04770	0.26	+0.1
1,067,446	-		PFLU_RS04770	0.26	-0.7
1,067,446	-		PFLU_RS04770	0.26	+0.5
1,067,502	+		PFLU_RS04770	0.27	+0.5
1,067,502	+		PFLU_RS04770	0.27	-2.2
1,067,502	+		PFLU_RS04770	0.27	+1.5
1,067,556	+		PFLU_RS04770	0.29	-0.3
1,067,556	+		PFLU_RS04770	0.29	+0.9
1,067,556	+		PFLU_RS04770	0.29	+0.4
1,067,557	-		PFLU_RS04770	0.29	-0.0
1,067,751	+		PFLU_RS04770	0.35	-1.0
1,067,751	+		PFLU_RS04770	0.35	-0.3
1,067,751	+		PFLU_RS04770	0.35	+0.1
1,067,751	+		PFLU_RS04770	0.35	+0.4
1,067,751	+		PFLU_RS04770	0.35	+0.2
1,067,811	+		PFLU_RS04770	0.37	+0.6
1,067,811	+		PFLU_RS04770	0.37	+1.0
1,067,811	+		PFLU_RS04770	0.37	-2.2
1,067,812	-		PFLU_RS04770	0.37	+0.6
1,068,121	-		PFLU_RS04770	0.47	+0.2
1,068,121	-		PFLU_RS04770	0.47	+0.3
1,068,121	-		PFLU_RS04770	0.47	-0.2
1,068,440	-		PFLU_RS04770	0.58	-1.5
1,068,440	-		PFLU_RS04770	0.58	+1.0
1,068,551	+		PFLU_RS04770	0.61	-0.4
1,068,606	+		PFLU_RS04770	0.63	-1.2
1,068,606	+		PFLU_RS04770	0.63	+0.9
1,068,606	+		PFLU_RS04770	0.63	+1.6
1,068,606	+		PFLU_RS04770	0.63	+0.0
1,068,606	+		PFLU_RS04770	0.63	+2.1
1,068,606	+		PFLU_RS04770	0.63	+1.5
1,068,607	-		PFLU_RS04770	0.63	+1.6
1,068,607	-		PFLU_RS04770	0.63	-0.1
1,068,607	-		PFLU_RS04770	0.63	+0.6
1,068,607	-		PFLU_RS04770	0.63	-0.4
1,068,930	+		PFLU_RS04770	0.73	-0.9
1,068,930	+		PFLU_RS04770	0.73	+0.3
1,068,930	+		PFLU_RS04770	0.73	-0.2
1,068,930	+		PFLU_RS04770	0.73	-0.9
1,068,931	-		PFLU_RS04770	0.74	-0.8
1,068,931	-		PFLU_RS04770	0.74	+0.1
1,068,931	-		PFLU_RS04770	0.74	-1.1
1,068,931	-		PFLU_RS04770	0.74	+0.8
1,068,996	+		PFLU_RS04770	0.76	+1.3
1,068,996	+		PFLU_RS04770	0.76	+0.1
1,068,996	+		PFLU_RS04770	0.76	+0.1
1,068,996	+		PFLU_RS04770	0.76	+1.0
1,068,996	+		PFLU_RS04770	0.76	-2.1
1,068,997	-		PFLU_RS04770	0.76	+0.7
1,068,997	-		PFLU_RS04770	0.76	-1.9
1,069,018	-		PFLU_RS04770	0.76	-0.8
1,069,077	+		PFLU_RS04770	0.78	-0.4
1,069,078	-		PFLU_RS04770	0.78	+0.2
1,069,270	-		PFLU_RS04770	0.84	-3.4
1,069,286	-		PFLU_RS04770	0.85	-0.0
1,069,373	-		PFLU_RS04770	0.88	-1.1
1,069,399	+		PFLU_RS04770	0.89	-2.5
1,069,453	+				+0.4
1,069,901	+		PFLU_RS04775	0.13	+0.4
1,069,901	+		PFLU_RS04775	0.13	+0.0
1,069,901	+		PFLU_RS04775	0.13	+0.6
1,069,901	+		PFLU_RS04775	0.13	-1.4
1,069,902	-		PFLU_RS04775	0.13	+1.2
1,069,902	-		PFLU_RS04775	0.13	+0.3
1,069,902	-		PFLU_RS04775	0.13	+1.1
1,069,902	-		PFLU_RS04775	0.13	-0.5
1,069,902	-		PFLU_RS04775	0.13	-0.9
1,069,902	-		PFLU_RS04775	0.13	-1.4
1,069,902	-		PFLU_RS04775	0.13	-0.4
1,070,190	+		PFLU_RS04775	0.38	-0.4
1,070,190	+		PFLU_RS04775	0.38	+1.6
1,070,191	-		PFLU_RS04775	0.38	-0.5
1,070,192	+		PFLU_RS04775	0.38	+0.9
1,070,192	+		PFLU_RS04775	0.38	+0.3
1,070,192	+		PFLU_RS04775	0.38	+0.3
1,070,192	+		PFLU_RS04775	0.38	-1.0
1,070,192	+		PFLU_RS04775	0.38	+1.1
1,070,192	+		PFLU_RS04775	0.38	+1.5
1,070,192	+		PFLU_RS04775	0.38	-1.7
1,070,192	+		PFLU_RS04775	0.38	+1.0
1,070,192	+		PFLU_RS04775	0.38	-1.0
1,070,192	+		PFLU_RS04775	0.38	+1.6
1,070,192	+		PFLU_RS04775	0.38	+0.7
1,070,192	+		PFLU_RS04775	0.38	+0.7
1,070,192	+		PFLU_RS04775	0.38	+0.8
1,070,192	+		PFLU_RS04775	0.38	+1.2
1,070,192	+		PFLU_RS04775	0.38	-0.8
1,070,192	+		PFLU_RS04775	0.38	-1.4
1,070,192	+		PFLU_RS04775	0.38	-0.0
1,070,192	+		PFLU_RS04775	0.38	+0.4
1,070,192	+		PFLU_RS04775	0.38	+0.3
1,070,192	+		PFLU_RS04775	0.38	-0.4
1,070,192	+		PFLU_RS04775	0.38	+0.8
1,070,192	+		PFLU_RS04775	0.38	+0.1
1,070,192	+		PFLU_RS04775	0.38	+0.4
1,070,192	+		PFLU_RS04775	0.38	-0.2
1,070,193	-		PFLU_RS04775	0.38	+1.1
1,070,193	-		PFLU_RS04775	0.38	+0.6
1,070,193	-		PFLU_RS04775	0.38	-1.4
1,070,193	-		PFLU_RS04775	0.38	-0.7
1,070,193	-		PFLU_RS04775	0.38	-0.3
1,070,193	-		PFLU_RS04775	0.38	+0.6
1,070,193	-		PFLU_RS04775	0.38	-0.7
1,070,193	-		PFLU_RS04775	0.38	+1.5
1,070,193	-		PFLU_RS04775	0.38	+0.3
1,070,193	-		PFLU_RS04775	0.38	+0.1
1,070,193	-		PFLU_RS04775	0.38	+0.8
1,070,193	-		PFLU_RS04775	0.38	+0.4
1,070,193	-		PFLU_RS04775	0.38	-0.4
1,070,193	-		PFLU_RS04775	0.38	+0.6
1,070,193	-		PFLU_RS04775	0.38	-1.9
1,070,193	-		PFLU_RS04775	0.38	-1.8
1,070,193	-		PFLU_RS04775	0.38	+1.3
1,070,193	-		PFLU_RS04775	0.38	+0.1
1,070,193	-		PFLU_RS04775	0.38	+0.1
1,070,337	+		PFLU_RS04775	0.51	-1.2
1,070,338	-		PFLU_RS04775	0.51	+1.0
1,070,338	-		PFLU_RS04775	0.51	+1.5
1,070,338	-		PFLU_RS04775	0.51	-1.4
1,070,338	-		PFLU_RS04775	0.51	-0.1
1,070,396	+		PFLU_RS04775	0.56	+0.9
1,070,397	-		PFLU_RS04775	0.56	+0.5
1,070,397	-		PFLU_RS04775	0.56	-2.3
1,070,397	-		PFLU_RS04775	0.56	+0.6
1,070,486	+		PFLU_RS04775	0.63	+1.4
1,070,486	+		PFLU_RS04775	0.63	+0.4
1,070,486	+		PFLU_RS04775	0.63	+1.4
1,070,486	+		PFLU_RS04775	0.63	-1.9
1,070,486	+		PFLU_RS04775	0.63	-0.6
1,070,486	+		PFLU_RS04775	0.63	-0.4
1,070,486	+		PFLU_RS04775	0.63	+0.5
1,070,486	+		PFLU_RS04775	0.63	-0.6
1,070,486	+		PFLU_RS04775	0.63	-1.8
1,070,486	+		PFLU_RS04775	0.63	-0.8
1,070,486	+		PFLU_RS04775	0.63	-2.8
1,070,487	-		PFLU_RS04775	0.63	+0.2
1,070,487	-		PFLU_RS04775	0.63	+1.4
1,070,487	-		PFLU_RS04775	0.63	+0.8
1,070,487	-		PFLU_RS04775	0.63	+0.3
1,070,487	-		PFLU_RS04775	0.63	+0.7
1,070,487	-		PFLU_RS04775	0.63	+1.3
1,070,487	-		PFLU_RS04775	0.63	+0.2
1,070,487	-		PFLU_RS04775	0.63	-2.8
1,070,487	-		PFLU_RS04775	0.63	+0.8
1,070,528	+		PFLU_RS04775	0.67	-0.7
1,070,528	+		PFLU_RS04775	0.67	-2.1
1,070,528	+		PFLU_RS04775	0.67	+1.3
1,070,529	-		PFLU_RS04775	0.67	+0.8
1,070,692	-		PFLU_RS04775	0.81	+0.3
1,070,710	+		PFLU_RS04775	0.83	-0.6
1,070,711	-		PFLU_RS04775	0.83	+1.2
1,070,711	-		PFLU_RS04775	0.83	+0.1
1,070,711	-		PFLU_RS04775	0.83	+0.5
1,070,711	-		PFLU_RS04775	0.83	+0.4
1,070,711	-		PFLU_RS04775	0.83	+1.0
1,070,711	-		PFLU_RS04775	0.83	-0.1