Experiment: NAG (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS31375 and PFLU_RS01120 are separated by 500 nucleotides PFLU_RS01120 and PFLU_RS01125 overlap by 20 nucleotides PFLU_RS01125 and PFLU_RS01130 overlap by 4 nucleotides
PFLU_RS31375: PFLU_RS31375 - hypothetical protein, at 245,933 to 246,113
_RS31375
PFLU_RS01120: PFLU_RS01120 - amino acid ABC transporter permease, at 246,614 to 247,279
_RS01120
PFLU_RS01125: PFLU_RS01125 - amino acid ABC transporter permease, at 247,260 to 247,919
_RS01125
PFLU_RS01130: PFLU_RS01130 - amino acid ABC transporter ATP-binding protein, at 247,916 to 248,692
_RS01130
Position (kb) 246
247
248 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 245.618 kb on - strand at 245.623 kb on + strand at 245.623 kb on + strand at 245.624 kb on - strand at 245.624 kb on - strand at 245.626 kb on + strand at 245.626 kb on + strand at 245.626 kb on + strand at 245.626 kb on + strand at 245.626 kb on + strand at 245.626 kb on + strand at 245.626 kb on + strand at 245.626 kb on + strand at 245.626 kb on + strand at 245.626 kb on + strand at 245.626 kb on + strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.627 kb on - strand at 245.634 kb on + strand at 245.634 kb on + strand at 245.702 kb on + strand at 245.726 kb on - strand at 245.728 kb on + strand at 245.740 kb on + strand at 245.791 kb on + strand at 245.834 kb on + strand at 245.849 kb on - strand at 245.855 kb on + strand at 245.964 kb on + strand, within PFLU_RS31375 at 245.979 kb on + strand, within PFLU_RS31375 at 245.980 kb on - strand, within PFLU_RS31375 at 245.980 kb on - strand, within PFLU_RS31375 at 245.980 kb on - strand, within PFLU_RS31375 at 245.980 kb on - strand, within PFLU_RS31375 at 246.045 kb on + strand, within PFLU_RS31375 at 246.045 kb on + strand, within PFLU_RS31375 at 246.045 kb on + strand, within PFLU_RS31375 at 246.045 kb on + strand, within PFLU_RS31375 at 246.045 kb on + strand, within PFLU_RS31375 at 246.045 kb on + strand, within PFLU_RS31375 at 246.045 kb on + strand, within PFLU_RS31375 at 246.045 kb on + strand, within PFLU_RS31375 at 246.046 kb on - strand, within PFLU_RS31375 at 246.046 kb on - strand, within PFLU_RS31375 at 246.046 kb on - strand, within PFLU_RS31375 at 246.046 kb on - strand, within PFLU_RS31375 at 246.046 kb on - strand, within PFLU_RS31375 at 246.046 kb on - strand, within PFLU_RS31375 at 246.046 kb on - strand, within PFLU_RS31375 at 246.048 kb on - strand, within PFLU_RS31375 at 246.098 kb on - strand at 246.098 kb on - strand at 246.098 kb on - strand at 246.111 kb on + strand at 246.111 kb on + strand at 246.111 kb on + strand at 246.111 kb on + strand at 246.111 kb on + strand at 246.112 kb on - strand at 246.112 kb on - strand at 246.112 kb on - strand at 246.112 kb on - strand at 246.145 kb on + strand at 246.145 kb on + strand at 246.145 kb on + strand at 246.146 kb on - strand at 246.172 kb on + strand at 246.173 kb on - strand at 246.173 kb on - strand at 246.234 kb on + strand at 246.234 kb on + strand at 246.234 kb on + strand at 246.234 kb on + strand at 246.235 kb on - strand at 246.325 kb on + strand at 246.331 kb on + strand at 246.331 kb on + strand at 246.331 kb on + strand at 246.331 kb on + strand at 246.331 kb on + strand at 246.331 kb on + strand at 246.332 kb on - strand at 246.332 kb on - strand at 246.332 kb on - strand at 246.332 kb on - strand at 246.332 kb on - strand at 246.332 kb on - strand at 246.332 kb on - strand at 246.332 kb on - strand at 246.404 kb on + strand at 246.405 kb on - strand at 246.405 kb on - strand at 246.421 kb on + strand at 246.421 kb on + strand at 246.422 kb on - strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.438 kb on + strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.439 kb on - strand at 246.474 kb on - strand at 246.500 kb on - strand at 246.504 kb on - strand at 246.589 kb on - strand at 246.589 kb on - strand at 246.634 kb on + strand at 246.661 kb on - strand at 246.661 kb on - strand at 246.761 kb on + strand, within PFLU_RS01120 at 246.762 kb on - strand, within PFLU_RS01120 at 246.785 kb on + strand, within PFLU_RS01120 at 246.785 kb on + strand, within PFLU_RS01120 at 246.785 kb on + strand, within PFLU_RS01120 at 246.785 kb on + strand, within PFLU_RS01120 at 246.785 kb on + strand, within PFLU_RS01120 at 246.785 kb on + strand, within PFLU_RS01120 at 246.785 kb on + strand, within PFLU_RS01120 at 246.785 kb on + strand, within PFLU_RS01120 at 246.785 kb on + strand, within PFLU_RS01120 at 246.786 kb on - strand, within PFLU_RS01120 at 246.786 kb on - strand, within PFLU_RS01120 at 246.786 kb on - strand, within PFLU_RS01120 at 246.786 kb on - strand, within PFLU_RS01120 at 246.786 kb on - strand, within PFLU_RS01120 at 246.836 kb on + strand, within PFLU_RS01120 at 246.836 kb on + strand, within PFLU_RS01120 at 246.836 kb on + strand, within PFLU_RS01120 at 246.865 kb on + strand, within PFLU_RS01120 at 246.866 kb on - strand, within PFLU_RS01120 at 246.866 kb on - strand, within PFLU_RS01120 at 246.866 kb on - strand, within PFLU_RS01120 at 246.917 kb on + strand, within PFLU_RS01120 at 247.130 kb on + strand, within PFLU_RS01120 at 247.145 kb on + strand, within PFLU_RS01120 at 247.145 kb on + strand, within PFLU_RS01120 at 247.146 kb on - strand, within PFLU_RS01120 at 247.146 kb on - strand, within PFLU_RS01120 at 247.146 kb on - strand, within PFLU_RS01120 at 247.146 kb on - strand, within PFLU_RS01120 at 247.157 kb on + strand, within PFLU_RS01120 at 247.158 kb on - strand, within PFLU_RS01120 at 247.158 kb on - strand, within PFLU_RS01120 at 247.160 kb on + strand, within PFLU_RS01120 at 247.160 kb on + strand, within PFLU_RS01120 at 247.161 kb on - strand, within PFLU_RS01120 at 247.161 kb on - strand, within PFLU_RS01120 at 247.161 kb on - strand, within PFLU_RS01120 at 247.161 kb on - strand, within PFLU_RS01120 at 247.170 kb on - strand, within PFLU_RS01120 at 247.362 kb on - strand, within PFLU_RS01125 at 247.380 kb on + strand, within PFLU_RS01125 at 247.380 kb on + strand, within PFLU_RS01125 at 247.380 kb on + strand, within PFLU_RS01125 at 247.380 kb on + strand, within PFLU_RS01125 at 247.380 kb on + strand, within PFLU_RS01125 at 247.381 kb on - strand, within PFLU_RS01125 at 247.381 kb on - strand, within PFLU_RS01125 at 247.381 kb on - strand, within PFLU_RS01125 at 247.381 kb on - strand, within PFLU_RS01125 at 247.381 kb on - strand, within PFLU_RS01125 at 247.381 kb on - strand, within PFLU_RS01125 at 247.427 kb on - strand, within PFLU_RS01125 at 247.434 kb on + strand, within PFLU_RS01125 at 247.434 kb on + strand, within PFLU_RS01125 at 247.434 kb on + strand, within PFLU_RS01125 at 247.435 kb on - strand, within PFLU_RS01125 at 247.435 kb on - strand, within PFLU_RS01125 at 247.435 kb on - strand, within PFLU_RS01125 at 247.476 kb on + strand, within PFLU_RS01125 at 247.476 kb on + strand, within PFLU_RS01125 at 247.476 kb on + strand, within PFLU_RS01125 at 247.476 kb on + strand, within PFLU_RS01125 at 247.476 kb on + strand, within PFLU_RS01125 at 247.476 kb on + strand, within PFLU_RS01125 at 247.477 kb on - strand, within PFLU_RS01125 at 247.477 kb on - strand, within PFLU_RS01125 at 247.477 kb on - strand, within PFLU_RS01125 at 247.477 kb on - strand, within PFLU_RS01125 at 247.662 kb on + strand, within PFLU_RS01125 at 247.663 kb on - strand, within PFLU_RS01125 at 247.663 kb on - strand, within PFLU_RS01125 at 247.669 kb on - strand, within PFLU_RS01125 at 247.782 kb on - strand, within PFLU_RS01125 at 247.782 kb on - strand, within PFLU_RS01125 at 247.812 kb on + strand, within PFLU_RS01125 at 247.812 kb on + strand, within PFLU_RS01125 at 247.812 kb on + strand, within PFLU_RS01125 at 247.812 kb on + strand, within PFLU_RS01125 at 247.812 kb on + strand, within PFLU_RS01125 at 247.812 kb on + strand, within PFLU_RS01125 at 247.812 kb on + strand, within PFLU_RS01125 at 247.812 kb on + strand, within PFLU_RS01125 at 247.812 kb on + strand, within PFLU_RS01125 at 247.813 kb on - strand, within PFLU_RS01125 at 247.813 kb on - strand, within PFLU_RS01125 at 247.813 kb on - strand, within PFLU_RS01125 at 247.813 kb on - strand, within PFLU_RS01125 at 247.813 kb on - strand, within PFLU_RS01125 at 247.831 kb on - strand, within PFLU_RS01125 at 247.859 kb on + strand at 247.859 kb on + strand at 247.859 kb on + strand at 247.859 kb on + strand at 247.860 kb on - strand at 247.860 kb on - strand at 248.180 kb on + strand, within PFLU_RS01130 at 248.180 kb on + strand, within PFLU_RS01130 at 248.180 kb on + strand, within PFLU_RS01130
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C); with MOPS remove 245,618 - +0.4 245,623 + -0.9 245,623 + -0.6 245,624 - +1.2 245,624 - -2.2 245,626 + +0.3 245,626 + -1.2 245,626 + -0.2 245,626 + -0.8 245,626 + -1.5 245,626 + +2.4 245,626 + +0.0 245,626 + +0.2 245,626 + +0.6 245,626 + +0.7 245,626 + +0.8 245,627 - -1.4 245,627 - -0.3 245,627 - -0.6 245,627 - +0.2 245,627 - -1.3 245,627 - -2.3 245,627 - -1.3 245,627 - -0.8 245,627 - +0.0 245,627 - +0.8 245,627 - +2.2 245,627 - +2.1 245,627 - +0.3 245,627 - +1.9 245,627 - +0.2 245,627 - +0.8 245,627 - -0.5 245,627 - +0.0 245,634 + +1.0 245,634 + +2.0 245,702 + +1.3 245,726 - +1.0 245,728 + +0.6 245,740 + -1.8 245,791 + +0.8 245,834 + +0.9 245,849 - +0.0 245,855 + +0.5 245,964 + PFLU_RS31375 0.17 +1.6 245,979 + PFLU_RS31375 0.25 +1.0 245,980 - PFLU_RS31375 0.26 +0.1 245,980 - PFLU_RS31375 0.26 -0.7 245,980 - PFLU_RS31375 0.26 +1.3 245,980 - PFLU_RS31375 0.26 -0.4 246,045 + PFLU_RS31375 0.62 +0.8 246,045 + PFLU_RS31375 0.62 +1.5 246,045 + PFLU_RS31375 0.62 +0.6 246,045 + PFLU_RS31375 0.62 +1.0 246,045 + PFLU_RS31375 0.62 +1.0 246,045 + PFLU_RS31375 0.62 -0.1 246,045 + PFLU_RS31375 0.62 +1.6 246,045 + PFLU_RS31375 0.62 -2.2 246,046 - PFLU_RS31375 0.62 +0.6 246,046 - PFLU_RS31375 0.62 +0.8 246,046 - PFLU_RS31375 0.62 +0.4 246,046 - PFLU_RS31375 0.62 -0.5 246,046 - PFLU_RS31375 0.62 -1.3 246,046 - PFLU_RS31375 0.62 -0.2 246,046 - PFLU_RS31375 0.62 +0.3 246,048 - PFLU_RS31375 0.64 +1.5 246,098 - +0.0 246,098 - -0.6 246,098 - +0.5 246,111 + +0.0 246,111 + +1.8 246,111 + +0.1 246,111 + -0.1 246,111 + +0.9 246,112 - +1.5 246,112 - -0.3 246,112 - +0.2 246,112 - -1.8 246,145 + +0.5 246,145 + +0.2 246,145 + -1.0 246,146 - -0.5 246,172 + +1.2 246,173 - -0.8 246,173 - -0.2 246,234 + +0.4 246,234 + +0.1 246,234 + -0.5 246,234 + +1.0 246,235 - +0.0 246,325 + -0.4 246,331 + -1.0 246,331 + -0.4 246,331 + +0.3 246,331 + -0.0 246,331 + -1.5 246,331 + +0.7 246,332 - +1.6 246,332 - +1.3 246,332 - +0.0 246,332 - -3.2 246,332 - +1.7 246,332 - +1.1 246,332 - +1.3 246,332 - +2.0 246,404 + -3.0 246,405 - -0.4 246,405 - -0.3 246,421 + +0.4 246,421 + -0.1 246,422 - +0.5 246,438 + -2.3 246,438 + -1.9 246,438 + -1.1 246,438 + +0.1 246,438 + -1.2 246,438 + -0.3 246,438 + +0.4 246,438 + -1.5 246,438 + +1.9 246,438 + -0.4 246,438 + +0.1 246,438 + -0.0 246,438 + -0.3 246,439 - +0.3 246,439 - -0.4 246,439 - -0.4 246,439 - +0.5 246,439 - +0.7 246,439 - -0.3 246,439 - -1.3 246,439 - -1.5 246,439 - +0.2 246,439 - +1.2 246,439 - -0.1 246,439 - +0.4 246,439 - -0.4 246,439 - +1.0 246,474 - -2.5 246,500 - +0.3 246,504 - -0.9 246,589 - +4.0 246,589 - +1.1 246,634 + +1.0 246,661 - +0.7 246,661 - +0.8 246,761 + PFLU_RS01120 0.22 -0.6 246,762 - PFLU_RS01120 0.22 -2.8 246,785 + PFLU_RS01120 0.26 +0.4 246,785 + PFLU_RS01120 0.26 -1.8 246,785 + PFLU_RS01120 0.26 -0.3 246,785 + PFLU_RS01120 0.26 -2.4 246,785 + PFLU_RS01120 0.26 -1.4 246,785 + PFLU_RS01120 0.26 +1.1 246,785 + PFLU_RS01120 0.26 +0.2 246,785 + PFLU_RS01120 0.26 -0.2 246,785 + PFLU_RS01120 0.26 -2.4 246,786 - PFLU_RS01120 0.26 -1.9 246,786 - PFLU_RS01120 0.26 -1.0 246,786 - PFLU_RS01120 0.26 -1.9 246,786 - PFLU_RS01120 0.26 +0.4 246,786 - PFLU_RS01120 0.26 -0.1 246,836 + PFLU_RS01120 0.33 +0.4 246,836 + PFLU_RS01120 0.33 -1.2 246,836 + PFLU_RS01120 0.33 +0.0 246,865 + PFLU_RS01120 0.38 -2.3 246,866 - PFLU_RS01120 0.38 -1.4 246,866 - PFLU_RS01120 0.38 +0.4 246,866 - PFLU_RS01120 0.38 +0.4 246,917 + PFLU_RS01120 0.45 -1.2 247,130 + PFLU_RS01120 0.77 +1.5 247,145 + PFLU_RS01120 0.80 +0.1 247,145 + PFLU_RS01120 0.80 -2.3 247,146 - PFLU_RS01120 0.80 +0.6 247,146 - PFLU_RS01120 0.80 -0.2 247,146 - PFLU_RS01120 0.80 -0.2 247,146 - PFLU_RS01120 0.80 +0.4 247,157 + PFLU_RS01120 0.82 -2.3 247,158 - PFLU_RS01120 0.82 -2.1 247,158 - PFLU_RS01120 0.82 +0.4 247,160 + PFLU_RS01120 0.82 +0.6 247,160 + PFLU_RS01120 0.82 +0.3 247,161 - PFLU_RS01120 0.82 -1.8 247,161 - PFLU_RS01120 0.82 -1.7 247,161 - PFLU_RS01120 0.82 -0.9 247,161 - PFLU_RS01120 0.82 -1.6 247,170 - PFLU_RS01120 0.83 +0.5 247,362 - PFLU_RS01125 0.15 -0.1 247,380 + PFLU_RS01125 0.18 +0.8 247,380 + PFLU_RS01125 0.18 -1.2 247,380 + PFLU_RS01125 0.18 -0.4 247,380 + PFLU_RS01125 0.18 -0.4 247,380 + PFLU_RS01125 0.18 -0.9 247,381 - PFLU_RS01125 0.18 -1.6 247,381 - PFLU_RS01125 0.18 +1.4 247,381 - PFLU_RS01125 0.18 -0.0 247,381 - PFLU_RS01125 0.18 +0.1 247,381 - PFLU_RS01125 0.18 -2.1 247,381 - PFLU_RS01125 0.18 -2.1 247,427 - PFLU_RS01125 0.25 -0.1 247,434 + PFLU_RS01125 0.26 -1.2 247,434 + PFLU_RS01125 0.26 +0.8 247,434 + PFLU_RS01125 0.26 -0.0 247,435 - PFLU_RS01125 0.27 +0.9 247,435 - PFLU_RS01125 0.27 -0.5 247,435 - PFLU_RS01125 0.27 -0.4 247,476 + PFLU_RS01125 0.33 -0.7 247,476 + PFLU_RS01125 0.33 -0.3 247,476 + PFLU_RS01125 0.33 -2.0 247,476 + PFLU_RS01125 0.33 -0.8 247,476 + PFLU_RS01125 0.33 -0.6 247,476 + PFLU_RS01125 0.33 -0.5 247,477 - PFLU_RS01125 0.33 -0.4 247,477 - PFLU_RS01125 0.33 +1.3 247,477 - PFLU_RS01125 0.33 -0.8 247,477 - PFLU_RS01125 0.33 -1.8 247,662 + PFLU_RS01125 0.61 +0.4 247,663 - PFLU_RS01125 0.61 +0.4 247,663 - PFLU_RS01125 0.61 -2.4 247,669 - PFLU_RS01125 0.62 +0.6 247,782 - PFLU_RS01125 0.79 +1.2 247,782 - PFLU_RS01125 0.79 +2.4 247,812 + PFLU_RS01125 0.84 -0.6 247,812 + PFLU_RS01125 0.84 -0.5 247,812 + PFLU_RS01125 0.84 -2.3 247,812 + PFLU_RS01125 0.84 +0.4 247,812 + PFLU_RS01125 0.84 +2.9 247,812 + PFLU_RS01125 0.84 +0.2 247,812 + PFLU_RS01125 0.84 +1.1 247,812 + PFLU_RS01125 0.84 -0.6 247,812 + PFLU_RS01125 0.84 +0.0 247,813 - PFLU_RS01125 0.84 -1.1 247,813 - PFLU_RS01125 0.84 +0.2 247,813 - PFLU_RS01125 0.84 +0.4 247,813 - PFLU_RS01125 0.84 -0.7 247,813 - PFLU_RS01125 0.84 -0.8 247,831 - PFLU_RS01125 0.87 +1.4 247,859 + +1.4 247,859 + -0.2 247,859 + +0.3 247,859 + +0.1 247,860 - +1.4 247,860 - +0.2 248,180 + PFLU_RS01130 0.34 +0.9 248,180 + PFLU_RS01130 0.34 -0.1 248,180 + PFLU_RS01130 0.34 +0.1
Or see this region's nucleotide sequence