Experiment: NAG (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS00765 and PFLU_RS00770 are separated by 470 nucleotides PFLU_RS00770 and PFLU_RS00775 are separated by 25 nucleotides PFLU_RS00775 and PFLU_RS00780 are separated by 144 nucleotides PFLU_RS00780 and PFLU_RS00785 are separated by 39 nucleotides
PFLU_RS00765: PFLU_RS00765 - hypothetical protein, at 175,182 to 176,000
_RS00765
PFLU_RS00770: PFLU_RS00770 - hypothetical protein, at 176,471 to 176,958
_RS00770
PFLU_RS00775: PFLU_RS00775 - hypothetical protein, at 176,984 to 177,433
_RS00775
PFLU_RS00780: PFLU_RS00780 - SMI1/KNR4 family protein, at 177,578 to 178,027
_RS00780
PFLU_RS00785: PFLU_RS00785 - signal peptidase I, at 178,067 to 178,855
_RS00785
Position (kb) 176
177
178 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 176.036 kb on + strand at 176.036 kb on + strand at 176.037 kb on - strand at 176.037 kb on - strand at 176.055 kb on + strand at 176.061 kb on - strand at 176.061 kb on - strand at 176.067 kb on + strand at 176.068 kb on - strand at 176.068 kb on - strand at 176.082 kb on + strand at 176.083 kb on - strand at 176.086 kb on + strand at 176.086 kb on + strand at 176.086 kb on + strand at 176.087 kb on - strand at 176.087 kb on - strand at 176.197 kb on - strand at 176.201 kb on + strand at 176.201 kb on + strand at 176.202 kb on - strand at 176.202 kb on - strand at 176.202 kb on - strand at 176.202 kb on - strand at 176.248 kb on + strand at 176.318 kb on + strand at 176.632 kb on - strand, within PFLU_RS00770 at 176.709 kb on + strand, within PFLU_RS00770 at 176.709 kb on + strand, within PFLU_RS00770 at 176.716 kb on + strand, within PFLU_RS00770 at 176.759 kb on + strand, within PFLU_RS00770 at 176.760 kb on - strand, within PFLU_RS00770 at 176.878 kb on + strand, within PFLU_RS00770 at 176.898 kb on - strand, within PFLU_RS00770 at 176.898 kb on - strand, within PFLU_RS00770 at 176.949 kb on + strand at 177.049 kb on + strand, within PFLU_RS00775 at 177.050 kb on - strand, within PFLU_RS00775 at 177.221 kb on + strand, within PFLU_RS00775 at 177.222 kb on - strand, within PFLU_RS00775 at 177.222 kb on - strand, within PFLU_RS00775 at 177.251 kb on + strand, within PFLU_RS00775 at 177.252 kb on - strand, within PFLU_RS00775 at 177.584 kb on + strand at 177.584 kb on + strand at 177.635 kb on + strand, within PFLU_RS00780 at 177.660 kb on + strand, within PFLU_RS00780 at 177.675 kb on + strand, within PFLU_RS00780 at 177.675 kb on + strand, within PFLU_RS00780 at 177.676 kb on - strand, within PFLU_RS00780 at 177.725 kb on + strand, within PFLU_RS00780 at 177.726 kb on - strand, within PFLU_RS00780 at 177.777 kb on - strand, within PFLU_RS00780 at 177.800 kb on + strand, within PFLU_RS00780 at 177.841 kb on + strand, within PFLU_RS00780 at 177.841 kb on + strand, within PFLU_RS00780 at 177.841 kb on + strand, within PFLU_RS00780 at 177.841 kb on + strand, within PFLU_RS00780 at 177.841 kb on + strand, within PFLU_RS00780 at 177.841 kb on + strand, within PFLU_RS00780 at 177.841 kb on + strand, within PFLU_RS00780 at 177.841 kb on + strand, within PFLU_RS00780 at 177.841 kb on + strand, within PFLU_RS00780 at 177.842 kb on - strand, within PFLU_RS00780 at 177.842 kb on - strand, within PFLU_RS00780 at 177.842 kb on - strand, within PFLU_RS00780 at 177.842 kb on - strand, within PFLU_RS00780 at 177.842 kb on - strand, within PFLU_RS00780 at 177.842 kb on - strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.845 kb on + strand, within PFLU_RS00780 at 177.846 kb on - strand, within PFLU_RS00780 at 177.846 kb on - strand, within PFLU_RS00780 at 177.846 kb on - strand, within PFLU_RS00780 at 177.846 kb on - strand, within PFLU_RS00780 at 177.846 kb on - strand, within PFLU_RS00780 at 177.846 kb on - strand, within PFLU_RS00780 at 177.846 kb on - strand, within PFLU_RS00780 at 177.846 kb on - strand, within PFLU_RS00780 at 177.846 kb on - strand, within PFLU_RS00780 at 177.846 kb on - strand, within PFLU_RS00780 at 177.846 kb on - strand, within PFLU_RS00780 at 177.878 kb on + strand, within PFLU_RS00780 at 177.879 kb on - strand, within PFLU_RS00780 at 178.002 kb on - strand at 178.025 kb on + strand at 178.025 kb on + strand at 178.025 kb on + strand at 178.025 kb on + strand at 178.026 kb on - strand at 178.026 kb on - strand at 178.026 kb on - strand at 178.052 kb on + strand at 178.055 kb on + strand at 178.077 kb on + strand at 178.136 kb on + strand at 178.136 kb on + strand at 178.136 kb on + strand at 178.136 kb on + strand at 178.136 kb on + strand at 178.137 kb on - strand at 178.137 kb on - strand at 178.137 kb on - strand at 178.137 kb on - strand at 178.137 kb on - strand at 178.137 kb on - strand at 178.137 kb on - strand at 178.181 kb on + strand, within PFLU_RS00785 at 178.182 kb on - strand, within PFLU_RS00785 at 178.182 kb on - strand, within PFLU_RS00785 at 178.182 kb on - strand, within PFLU_RS00785 at 178.182 kb on - strand, within PFLU_RS00785 at 178.182 kb on - strand, within PFLU_RS00785 at 178.238 kb on + strand, within PFLU_RS00785 at 178.238 kb on + strand, within PFLU_RS00785 at 178.238 kb on + strand, within PFLU_RS00785 at 178.238 kb on + strand, within PFLU_RS00785 at 178.238 kb on + strand, within PFLU_RS00785 at 178.238 kb on + strand, within PFLU_RS00785 at 178.238 kb on + strand, within PFLU_RS00785 at 178.238 kb on + strand, within PFLU_RS00785 at 178.238 kb on + strand, within PFLU_RS00785 at 178.238 kb on + strand, within PFLU_RS00785 at 178.239 kb on - strand, within PFLU_RS00785 at 178.239 kb on - strand, within PFLU_RS00785 at 178.239 kb on - strand, within PFLU_RS00785 at 178.239 kb on - strand, within PFLU_RS00785 at 178.239 kb on - strand, within PFLU_RS00785 at 178.239 kb on - strand, within PFLU_RS00785 at 178.354 kb on - strand, within PFLU_RS00785 at 178.355 kb on + strand, within PFLU_RS00785 at 178.355 kb on + strand, within PFLU_RS00785 at 178.355 kb on + strand, within PFLU_RS00785 at 178.355 kb on + strand, within PFLU_RS00785 at 178.355 kb on + strand, within PFLU_RS00785 at 178.355 kb on + strand, within PFLU_RS00785 at 178.355 kb on + strand, within PFLU_RS00785 at 178.355 kb on + strand, within PFLU_RS00785 at 178.355 kb on + strand, within PFLU_RS00785 at 178.355 kb on + strand, within PFLU_RS00785 at 178.355 kb on + strand, within PFLU_RS00785 at 178.356 kb on - strand, within PFLU_RS00785 at 178.356 kb on - strand, within PFLU_RS00785 at 178.356 kb on - strand, within PFLU_RS00785 at 178.356 kb on - strand, within PFLU_RS00785 at 178.356 kb on - strand, within PFLU_RS00785 at 178.356 kb on - strand, within PFLU_RS00785 at 178.430 kb on + strand, within PFLU_RS00785 at 178.431 kb on - strand, within PFLU_RS00785 at 178.431 kb on - strand, within PFLU_RS00785 at 178.433 kb on + strand, within PFLU_RS00785 at 178.433 kb on + strand, within PFLU_RS00785 at 178.433 kb on + strand, within PFLU_RS00785 at 178.433 kb on + strand, within PFLU_RS00785 at 178.433 kb on + strand, within PFLU_RS00785
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C); with MOPS remove 176,036 + -1.2 176,036 + +0.2 176,037 - -2.5 176,037 - +1.4 176,055 + -0.4 176,061 - -0.1 176,061 - -0.5 176,067 + +0.1 176,068 - +1.0 176,068 - -0.6 176,082 + +1.1 176,083 - -0.6 176,086 + +0.5 176,086 + +0.2 176,086 + +0.6 176,087 - -0.4 176,087 - -0.0 176,197 - -1.8 176,201 + +0.5 176,201 + -0.7 176,202 - -0.8 176,202 - -0.7 176,202 - +1.6 176,202 - -0.3 176,248 + -2.0 176,318 + -1.3 176,632 - PFLU_RS00770 0.33 +0.9 176,709 + PFLU_RS00770 0.49 +1.5 176,709 + PFLU_RS00770 0.49 +0.8 176,716 + PFLU_RS00770 0.50 +0.2 176,759 + PFLU_RS00770 0.59 +0.9 176,760 - PFLU_RS00770 0.59 +1.2 176,878 + PFLU_RS00770 0.83 +0.7 176,898 - PFLU_RS00770 0.88 +2.6 176,898 - PFLU_RS00770 0.88 +0.3 176,949 + +1.0 177,049 + PFLU_RS00775 0.14 +2.2 177,050 - PFLU_RS00775 0.15 +0.1 177,221 + PFLU_RS00775 0.53 +0.4 177,222 - PFLU_RS00775 0.53 +0.4 177,222 - PFLU_RS00775 0.53 +1.7 177,251 + PFLU_RS00775 0.59 +0.9 177,252 - PFLU_RS00775 0.60 -0.5 177,584 + -2.2 177,584 + +0.8 177,635 + PFLU_RS00780 0.13 -0.4 177,660 + PFLU_RS00780 0.18 +0.5 177,675 + PFLU_RS00780 0.22 +0.7 177,675 + PFLU_RS00780 0.22 -0.2 177,676 - PFLU_RS00780 0.22 -1.8 177,725 + PFLU_RS00780 0.33 -1.7 177,726 - PFLU_RS00780 0.33 +0.6 177,777 - PFLU_RS00780 0.44 -0.5 177,800 + PFLU_RS00780 0.49 -1.6 177,841 + PFLU_RS00780 0.58 -0.8 177,841 + PFLU_RS00780 0.58 -0.6 177,841 + PFLU_RS00780 0.58 +0.5 177,841 + PFLU_RS00780 0.58 -2.5 177,841 + PFLU_RS00780 0.58 -0.9 177,841 + PFLU_RS00780 0.58 +1.9 177,841 + PFLU_RS00780 0.58 -1.8 177,841 + PFLU_RS00780 0.58 +0.6 177,841 + PFLU_RS00780 0.58 +1.5 177,842 - PFLU_RS00780 0.59 -1.8 177,842 - PFLU_RS00780 0.59 -0.9 177,842 - PFLU_RS00780 0.59 +0.6 177,842 - PFLU_RS00780 0.59 +1.3 177,842 - PFLU_RS00780 0.59 -0.0 177,842 - PFLU_RS00780 0.59 +0.4 177,845 + PFLU_RS00780 0.59 -1.4 177,845 + PFLU_RS00780 0.59 -1.3 177,845 + PFLU_RS00780 0.59 -1.2 177,845 + PFLU_RS00780 0.59 -2.1 177,845 + PFLU_RS00780 0.59 +1.4 177,845 + PFLU_RS00780 0.59 +2.3 177,845 + PFLU_RS00780 0.59 -0.6 177,845 + PFLU_RS00780 0.59 -1.7 177,845 + PFLU_RS00780 0.59 +2.4 177,845 + PFLU_RS00780 0.59 +0.7 177,845 + PFLU_RS00780 0.59 +0.6 177,845 + PFLU_RS00780 0.59 +0.2 177,845 + PFLU_RS00780 0.59 -0.8 177,846 - PFLU_RS00780 0.60 +0.8 177,846 - PFLU_RS00780 0.60 +2.6 177,846 - PFLU_RS00780 0.60 +0.1 177,846 - PFLU_RS00780 0.60 +0.9 177,846 - PFLU_RS00780 0.60 -0.4 177,846 - PFLU_RS00780 0.60 -0.7 177,846 - PFLU_RS00780 0.60 -1.0 177,846 - PFLU_RS00780 0.60 +1.1 177,846 - PFLU_RS00780 0.60 -1.9 177,846 - PFLU_RS00780 0.60 -0.5 177,846 - PFLU_RS00780 0.60 -0.1 177,878 + PFLU_RS00780 0.67 +0.2 177,879 - PFLU_RS00780 0.67 +0.6 178,002 - +1.7 178,025 + -0.7 178,025 + +0.7 178,025 + +1.8 178,025 + -0.6 178,026 - +0.5 178,026 - -0.1 178,026 - -0.2 178,052 + -0.2 178,055 + -0.2 178,077 + +0.2 178,136 + +0.1 178,136 + +1.3 178,136 + +0.0 178,136 + -0.3 178,136 + -0.7 178,137 - +1.0 178,137 - +0.1 178,137 - +1.1 178,137 - -0.7 178,137 - +0.4 178,137 - +0.2 178,137 - +1.8 178,181 + PFLU_RS00785 0.14 -0.6 178,182 - PFLU_RS00785 0.15 -1.4 178,182 - PFLU_RS00785 0.15 +0.8 178,182 - PFLU_RS00785 0.15 -1.4 178,182 - PFLU_RS00785 0.15 -0.4 178,182 - PFLU_RS00785 0.15 -1.6 178,238 + PFLU_RS00785 0.22 +0.2 178,238 + PFLU_RS00785 0.22 +0.5 178,238 + PFLU_RS00785 0.22 -0.6 178,238 + PFLU_RS00785 0.22 -0.8 178,238 + PFLU_RS00785 0.22 -0.3 178,238 + PFLU_RS00785 0.22 -0.3 178,238 + PFLU_RS00785 0.22 +1.3 178,238 + PFLU_RS00785 0.22 +0.4 178,238 + PFLU_RS00785 0.22 +0.9 178,238 + PFLU_RS00785 0.22 -2.2 178,239 - PFLU_RS00785 0.22 +2.4 178,239 - PFLU_RS00785 0.22 -0.0 178,239 - PFLU_RS00785 0.22 -1.5 178,239 - PFLU_RS00785 0.22 +0.1 178,239 - PFLU_RS00785 0.22 +0.7 178,239 - PFLU_RS00785 0.22 +1.0 178,354 - PFLU_RS00785 0.36 -0.7 178,355 + PFLU_RS00785 0.37 +0.3 178,355 + PFLU_RS00785 0.37 +0.7 178,355 + PFLU_RS00785 0.37 -0.2 178,355 + PFLU_RS00785 0.37 +0.1 178,355 + PFLU_RS00785 0.37 -0.0 178,355 + PFLU_RS00785 0.37 +0.8 178,355 + PFLU_RS00785 0.37 +0.7 178,355 + PFLU_RS00785 0.37 -1.3 178,355 + PFLU_RS00785 0.37 -2.8 178,355 + PFLU_RS00785 0.37 -0.4 178,355 + PFLU_RS00785 0.37 +1.4 178,356 - PFLU_RS00785 0.37 +0.5 178,356 - PFLU_RS00785 0.37 +0.8 178,356 - PFLU_RS00785 0.37 -2.7 178,356 - PFLU_RS00785 0.37 -0.3 178,356 - PFLU_RS00785 0.37 -0.4 178,356 - PFLU_RS00785 0.37 -0.2 178,430 + PFLU_RS00785 0.46 +1.1 178,431 - PFLU_RS00785 0.46 +0.2 178,431 - PFLU_RS00785 0.46 +1.4 178,433 + PFLU_RS00785 0.46 -1.6 178,433 + PFLU_RS00785 0.46 -2.0 178,433 + PFLU_RS00785 0.46 +0.4 178,433 + PFLU_RS00785 0.46 -1.5 178,433 + PFLU_RS00785 0.46 +1.0
Or see this region's nucleotide sequence