Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4297

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
5,137,921	-		Echvi_4295	0.59	+0.2
5,137,957	-		Echvi_4295	0.62	+0.1
5,138,123	-		Echvi_4295	0.75	-0.8
5,138,229	+		Echvi_4295	0.84	+0.6
5,138,230	-		Echvi_4295	0.84	-0.1
5,138,230	-		Echvi_4295	0.84	+0.4
5,138,230	-		Echvi_4295	0.84	+0.9
5,138,308	-				+0.9
5,138,353	+				-1.7
5,138,353	+				+0.5
5,138,357	-				+0.9
5,138,357	-				+0.3
5,138,409	+				+0.9
5,138,409	+				+1.1
5,138,409	+				+0.2
5,138,410	-				-1.2
5,138,466	+				-0.8
5,138,466	+				+0.5
5,138,467	-				+0.9
5,138,467	-				-0.7
5,138,467	-				+0.3
5,138,467	-				-0.4
5,138,496	+		Echvi_4296	0.18	-1.1
5,138,580	-		Echvi_4296	0.42	-0.1
5,138,580	-		Echvi_4296	0.42	-1.6
5,138,700	+		Echvi_4296	0.77	+0.2
5,138,793	+				+0.4
5,138,804	+				+0.0
5,138,805	-				-1.1
5,138,872	+				+1.3
5,138,872	+				+0.1
5,138,873	-				-0.7
5,138,879	+				+0.0
5,138,879	+				-0.9
5,138,879	+				+0.1
5,138,879	+				-1.9
5,138,879	+				+0.7
5,138,879	+				-0.8
5,138,880	-				-0.3
5,138,920	+				-0.6
5,138,927	+				+1.5
5,138,927	+				-0.5
5,138,928	-				-0.4
5,138,928	-				-1.2
5,138,950	+				+0.1
5,138,950	+				-0.1
5,138,950	+				-1.5
5,138,950	+				+0.1
5,138,954	+				+0.9
5,138,955	-				+1.6
5,138,955	-				-0.9
5,138,976	-				+1.2
5,139,028	+		Echvi_4297	0.16	-0.6
5,139,028	+		Echvi_4297	0.16	-0.2
5,139,029	-		Echvi_4297	0.16	-0.2
5,139,030	+		Echvi_4297	0.16	+0.9
5,139,031	-		Echvi_4297	0.16	+0.3
5,139,059	+		Echvi_4297	0.20	+0.2
5,139,059	+		Echvi_4297	0.20	-0.3
5,139,059	+		Echvi_4297	0.20	+1.2
5,139,060	-		Echvi_4297	0.20	+0.9
5,139,066	-		Echvi_4297	0.20	-0.2
5,139,070	+		Echvi_4297	0.21	+0.8
5,139,070	+		Echvi_4297	0.21	-0.8
5,139,071	-		Echvi_4297	0.21	-0.1
5,139,089	+		Echvi_4297	0.23	-0.7
5,139,090	-		Echvi_4297	0.23	-1.1
5,139,119	+		Echvi_4297	0.27	-1.1
5,139,120	-				+0.3
5,139,133	+		Echvi_4297	0.28	-0.3
5,139,134	-		Echvi_4297	0.28	-0.6
5,139,134	-		Echvi_4297	0.28	+0.9
5,139,139	+		Echvi_4297	0.29	-0.8
5,139,139	+		Echvi_4297	0.29	-0.7
5,139,140	-		Echvi_4297	0.29	-2.8
5,139,140	-		Echvi_4297	0.29	+0.3
5,139,145	+		Echvi_4297	0.30	+1.7
5,139,146	-		Echvi_4297	0.30	+2.2
5,139,147	+		Echvi_4297	0.30	+1.0
5,139,161	-		Echvi_4297	0.32	-0.2
5,139,176	+		Echvi_4297	0.33	-0.8
5,139,177	-		Echvi_4297	0.33	+0.9
5,139,180	-		Echvi_4297	0.34	+0.9
5,139,224	+		Echvi_4297	0.39	-2.3
5,139,225	-		Echvi_4297	0.39	+1.4
5,139,243	-		Echvi_4297	0.41	-0.4
5,139,247	-		Echvi_4297	0.42	-0.6
5,139,247	-		Echvi_4297	0.42	+0.1
5,139,268	+		Echvi_4297	0.44	+1.0
5,139,268	+		Echvi_4297	0.44	+1.1
5,139,287	-		Echvi_4297	0.46	+2.6
5,139,295	+		Echvi_4297	0.47	-2.7
5,139,295	+		Echvi_4297	0.47	-0.0
5,139,296	-		Echvi_4297	0.48	-0.5
5,139,401	+		Echvi_4297	0.60	-0.1
5,139,431	+		Echvi_4297	0.63	-0.2
5,139,431	+		Echvi_4297	0.63	+0.3
5,139,431	+		Echvi_4297	0.63	-0.3
5,139,432	-		Echvi_4297	0.64	-1.1
5,139,432	-		Echvi_4297	0.64	+0.2
5,139,432	-		Echvi_4297	0.64	-0.2
5,139,446	+		Echvi_4297	0.65	-1.9
5,139,447	-		Echvi_4297	0.65	-0.5
5,139,447	-		Echvi_4297	0.65	+0.2
5,139,537	+		Echvi_4297	0.76	-0.5
5,139,563	-		Echvi_4297	0.79	-0.1
5,139,627	+		Echvi_4297	0.87	+4.2
5,139,630	-		Echvi_4297	0.87	+1.0
5,139,643	+		Echvi_4297	0.89	+0.9
5,139,663	-				+0.6
5,139,790	-				+0.1
5,139,790	-				+0.1
5,139,790	-				+0.7
5,139,790	-				-1.2
5,139,791	+				-1.2
5,139,792	-				-1.1
5,139,797	+				-1.6
5,139,797	+				+0.3
5,139,798	-				-0.5
5,139,798	-				+0.6
5,139,798	-				+0.3
5,139,805	+				-3.7
5,139,819	+				-0.1
5,139,822	+				-0.7
5,139,863	+				-1.0
5,139,864	-				-1.7
5,139,888	+				-0.8
5,139,889	-				-0.8
5,139,889	-				-0.8
5,139,889	-				-0.1
5,139,889	-				-0.2
5,139,889	-				+0.0
5,139,890	+				-0.1
5,139,896	+				+0.6
5,139,896	+				-0.8
5,139,897	-				-0.6
5,139,897	-				+0.3
5,139,899	+				+0.5
5,139,900	-				+0.3
5,139,902	-				+0.3
5,139,917	+				-0.1
5,139,949	+		Echvi_4298	0.15	-1.6
5,139,967	+		Echvi_4298	0.20	+0.3
5,139,971	-		Echvi_4298	0.21	+0.6
5,140,032	+		Echvi_4298	0.35	+0.0
5,140,055	+		Echvi_4298	0.41	-3.0
5,140,055	+		Echvi_4298	0.41	-0.5
5,140,055	+		Echvi_4298	0.41	+0.1
5,140,056	-		Echvi_4298	0.41	-2.2
5,140,098	+		Echvi_4298	0.51	+0.5
5,140,098	+		Echvi_4298	0.51	+0.8
5,140,098	+		Echvi_4298	0.51	+1.3
5,140,112	+		Echvi_4298	0.54	+0.2
5,140,167	-		Echvi_4298	0.68	+0.2
5,140,208	+		Echvi_4298	0.77	+0.2
5,140,228	-		Echvi_4298	0.82	-1.9
5,140,234	-		Echvi_4298	0.84	-2.0
5,140,234	-		Echvi_4298	0.84	+0.3
5,140,234	-		Echvi_4298	0.84	-1.2
5,140,257	+		Echvi_4298	0.89	+1.6
5,140,258	-		Echvi_4298	0.89	-2.0
5,140,258	-		Echvi_4298	0.89	-0.2
5,140,304	+				-0.3
5,140,305	-				+1.1
5,140,305	-				-0.2
5,140,316	-				+0.7
5,140,370	+		Echvi_4299	0.12	+0.3
5,140,370	+		Echvi_4299	0.12	+0.3
5,140,371	-		Echvi_4299	0.12	+0.1
5,140,371	-		Echvi_4299	0.12	-0.9
5,140,372	+		Echvi_4299	0.12	+0.7
5,140,373	-		Echvi_4299	0.13	+0.3
5,140,417	+		Echvi_4299	0.22	+0.0
5,140,437	+		Echvi_4299	0.26	+1.7
5,140,470	+		Echvi_4299	0.33	-0.6
5,140,471	-		Echvi_4299	0.34	+0.5
5,140,515	-		Echvi_4299	0.43	-1.5
5,140,537	+		Echvi_4299	0.48	+1.0
5,140,554	-		Echvi_4299	0.51	-0.3
5,140,653	+		Echvi_4299	0.72	-1.9
5,140,653	+		Echvi_4299	0.72	-0.8
5,140,653	+		Echvi_4299	0.72	-0.4
5,140,674	+		Echvi_4299	0.77	+1.3
5,140,674	+		Echvi_4299	0.77	-1.8
5,140,686	+		Echvi_4299	0.79	-1.9
5,140,686	+		Echvi_4299	0.79	-3.3
5,140,735	-				+0.3