Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3830

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
4,575,569	+		Echvi_3828	0.57	+0.1
4,575,569	+		Echvi_3828	0.57	-0.5
4,575,569	+		Echvi_3828	0.57	+0.1
4,575,570	-		Echvi_3828	0.57	-0.5
4,575,588	+		Echvi_3828	0.59	-0.0
4,575,625	-		Echvi_3828	0.64	+2.5
4,575,636	+		Echvi_3828	0.66	+0.3
4,575,638	+		Echvi_3828	0.66	+0.5
4,575,638	+		Echvi_3828	0.66	-2.1
4,575,639	-		Echvi_3828	0.66	-1.1
4,575,649	+		Echvi_3828	0.68	+0.0
4,575,649	+		Echvi_3828	0.68	+0.9
4,575,650	-		Echvi_3828	0.68	-0.5
4,575,686	-		Echvi_3828	0.73	+0.9
4,575,743	+		Echvi_3828	0.81	-0.1
4,575,756	+		Echvi_3828	0.82	-0.4
4,575,756	+		Echvi_3828	0.82	-1.1
4,575,756	+		Echvi_3828	0.82	-1.7
4,575,756	+		Echvi_3828	0.82	-1.8
4,575,756	+		Echvi_3828	0.82	+0.0
4,575,756	+		Echvi_3828	0.82	+0.3
4,575,757	-		Echvi_3828	0.83	+2.2
4,575,757	-		Echvi_3828	0.83	-0.4
4,575,758	+		Echvi_3828	0.83	-1.1
4,575,758	+		Echvi_3828	0.83	+0.3
4,575,759	-		Echvi_3828	0.83	+0.3
4,575,759	-		Echvi_3828	0.83	-0.1
4,575,759	-		Echvi_3828	0.83	+0.0
4,575,830	-				-0.9
4,575,830	-				+1.0
4,575,830	-				-0.1
4,575,840	+				-0.9
4,575,840	+				-0.9
4,575,893	+				-0.6
4,575,894	-				-0.8
4,575,959	-				+1.3
4,576,008	+				-0.9
4,576,008	+				-0.7
4,576,008	+				+0.9
4,576,197	+		Echvi_3829	0.36	-0.3
4,576,197	+		Echvi_3829	0.36	+0.2
4,576,259	+		Echvi_3829	0.49	+0.5
4,576,260	-		Echvi_3829	0.49	-0.4
4,576,260	-		Echvi_3829	0.49	+0.3
4,576,260	-		Echvi_3829	0.49	-0.5
4,576,302	-		Echvi_3829	0.58	+0.5
4,576,329	-		Echvi_3829	0.64	+0.6
4,576,453	-		Echvi_3829	0.90	-0.4
4,576,459	-				-0.5
4,576,549	-				-0.5
4,576,549	-				-0.1
4,576,563	-				-0.8
4,576,605	-				-0.5
4,576,624	+				+0.4
4,576,628	+				-0.5
4,576,628	+				-0.2
4,576,628	+				-0.5
4,576,629	-				-0.3
4,576,629	-				-0.2
4,576,629	-				+1.3
4,576,732	-		Echvi_3830	0.13	-1.9
4,576,844	-		Echvi_3830	0.21	+0.4
4,576,937	+		Echvi_3830	0.28	+0.9
4,576,974	+		Echvi_3830	0.31	-0.1
4,576,975	-		Echvi_3830	0.31	-2.1
4,577,074	-		Echvi_3830	0.38	-0.5
4,577,147	+		Echvi_3830	0.43	-1.1
4,577,147	+		Echvi_3830	0.43	-0.5
4,577,147	+		Echvi_3830	0.43	-1.2
4,577,148	-		Echvi_3830	0.44	+0.0
4,577,148	-		Echvi_3830	0.44	+1.3
4,577,265	+		Echvi_3830	0.52	-1.6
4,577,331	+		Echvi_3830	0.57	+0.0
4,577,333	+		Echvi_3830	0.57	+0.1
4,577,333	+		Echvi_3830	0.57	+0.4
4,577,333	+		Echvi_3830	0.57	-1.4
4,577,333	+		Echvi_3830	0.57	-0.7
4,577,333	+		Echvi_3830	0.57	-0.8
4,577,333	+		Echvi_3830	0.57	-0.9
4,577,333	+		Echvi_3830	0.57	-0.4
4,577,333	+		Echvi_3830	0.57	+0.3
4,577,334	-		Echvi_3830	0.57	-0.8
4,577,334	-		Echvi_3830	0.57	-0.1
4,577,334	-		Echvi_3830	0.57	-0.3
4,577,334	-		Echvi_3830	0.57	-2.4
4,577,334	-		Echvi_3830	0.57	-0.7
4,577,384	+		Echvi_3830	0.61	-0.4
4,577,385	-		Echvi_3830	0.61	+1.1
4,577,528	-		Echvi_3830	0.71	-1.4
4,577,528	-		Echvi_3830	0.71	-3.1
4,577,592	-		Echvi_3830	0.76	-1.5
4,577,634	+		Echvi_3830	0.79	-0.7
4,577,634	+		Echvi_3830	0.79	-0.3
4,577,635	-		Echvi_3830	0.79	-0.2
4,577,695	-		Echvi_3830	0.83	+1.4
4,577,695	-		Echvi_3830	0.83	-0.1
4,577,789	+				+1.1
4,577,816	+				+0.3
4,577,817	-				-1.7
4,577,829	+				-0.6
4,577,837	-				-0.4
4,577,871	+				-1.0
4,577,957	+				+0.3
4,577,957	+				-1.2
4,577,957	+				-1.4
4,577,958	-				+0.6
4,577,965	+				+0.6
4,577,965	+				-0.6
4,577,965	+				-0.5
4,577,966	-				+0.8
4,577,966	-				-1.1
4,577,967	+				-1.0
4,577,967	+				-1.3
4,577,968	-				-0.1
4,577,968	-				-2.0
4,577,976	-				-1.7
4,577,976	-				-0.1
4,577,995	+		Echvi_3831	0.13	+0.5
4,578,029	+		Echvi_3831	0.21	+1.6
4,578,030	-		Echvi_3831	0.22	-0.3
4,578,030	-		Echvi_3831	0.22	-0.1
4,578,035	+		Echvi_3831	0.23	-1.3
4,578,035	+		Echvi_3831	0.23	+1.1
4,578,036	-		Echvi_3831	0.23	-0.2
4,578,100	-		Echvi_3831	0.39	-0.9
4,578,106	+		Echvi_3831	0.41	+0.5
4,578,107	-		Echvi_3831	0.41	-0.6
4,578,110	+		Echvi_3831	0.42	-0.2
4,578,110	+		Echvi_3831	0.42	-1.2
4,578,111	-		Echvi_3831	0.42	+0.0
4,578,111	-		Echvi_3831	0.42	-0.2
4,578,111	-		Echvi_3831	0.42	-0.1
4,578,111	-		Echvi_3831	0.42	-0.1
4,578,141	-		Echvi_3831	0.49	+0.9
4,578,141	-		Echvi_3831	0.49	+0.2
4,578,141	-		Echvi_3831	0.49	+1.0
4,578,152	+		Echvi_3831	0.52	-0.5
4,578,153	-		Echvi_3831	0.52	-0.5
4,578,155	+		Echvi_3831	0.53	-0.8
4,578,219	+		Echvi_3831	0.69	-0.5
4,578,219	+		Echvi_3831	0.69	+0.7
4,578,231	+		Echvi_3831	0.72	-0.3
4,578,231	+		Echvi_3831	0.72	+0.1
4,578,295	-		Echvi_3831	0.88	-0.8
4,578,300	+		Echvi_3831	0.89	-0.8
4,578,310	-				-1.1
4,578,321	+				-0.3
4,578,323	+				+0.1
4,578,323	+				-0.1
4,578,339	+				+0.9
4,578,339	+				-0.3
4,578,339	+				-1.2
4,578,339	+				-0.6
4,578,344	+				+1.9
4,578,344	+				+0.4
4,578,344	+				+1.1
4,578,344	+				-0.8
4,578,374	+				-0.9
4,578,374	+				-0.7
4,578,374	+				+0.7
4,578,374	+				-2.0
4,578,443	+				-0.4
4,578,444	+				+0.2
4,578,444	+				-0.5
4,578,445	-				+0.6
4,578,445	-				+0.0
4,578,445	-				+1.6
4,578,445	-				-0.8
4,578,445	-				-0.7
4,578,445	-				-0.6
4,578,445	-				+0.8
4,578,445	-				-2.0
4,578,446	+				+0.6
4,578,495	+				+0.6
4,578,505	+				-0.9
4,578,519	+				-1.9
4,578,519	+				-0.5
4,578,520	-				+0.7
4,578,523	-				+0.7
4,578,523	-				+0.6
4,578,570	+				-1.1
4,578,576	+				-0.1
4,578,576	+				-1.6
4,578,577	-				-2.5
4,578,580	-				+0.0
4,578,591	+				+0.1
4,578,592	-				+0.4
4,578,609	+				-2.3
4,578,698	-				-0.6
4,578,738	+				-0.9
4,578,738	+				-3.5
4,578,782	-		Echvi_3832	0.12	-2.8
4,578,831	+		Echvi_3832	0.15	-3.2
4,578,917	-		Echvi_3832	0.21	-3.4