Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2354

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
2,791,432	-				-1.5
2,791,432	-				-1.5
2,791,480	+				+0.1
2,791,480	+				+0.8
2,791,480	+				-2.8
2,791,480	+				+0.1
2,791,481	-				+0.6
2,791,481	-				-2.7
2,791,483	+				+0.6
2,791,483	+				+0.7
2,791,483	+				-0.9
2,791,483	+				-1.5
2,791,484	-				-0.5
2,791,484	-				-1.1
2,791,484	-				+0.8
2,791,484	-				-1.0
2,791,484	-				-0.9
2,791,484	-				+0.7
2,791,484	-				+0.5
2,791,577	+		Echvi_2353	0.12	+0.2
2,791,577	+		Echvi_2353	0.12	-0.1
2,791,577	+		Echvi_2353	0.12	+0.6
2,791,577	+		Echvi_2353	0.12	+0.4
2,791,577	+		Echvi_2353	0.12	-1.4
2,791,577	+		Echvi_2353	0.12	+0.7
2,791,578	-		Echvi_2353	0.12	-0.7
2,791,578	-		Echvi_2353	0.12	+1.7
2,791,578	-		Echvi_2353	0.12	+0.5
2,791,578	-		Echvi_2353	0.12	-1.4
2,791,599	+		Echvi_2353	0.16	+0.2
2,791,619	-		Echvi_2353	0.19	-0.7
2,791,661	+		Echvi_2353	0.26	-0.6
2,791,661	+		Echvi_2353	0.26	+0.6
2,791,661	+		Echvi_2353	0.26	+1.1
2,791,661	+		Echvi_2353	0.26	-0.5
2,791,662	-		Echvi_2353	0.26	+0.6
2,791,662	-		Echvi_2353	0.26	-0.9
2,791,792	-		Echvi_2353	0.47	-0.8
2,791,795	+		Echvi_2353	0.48	+1.8
2,791,795	+		Echvi_2353	0.48	+0.1
2,791,795	+		Echvi_2353	0.48	-0.0
2,791,795	+		Echvi_2353	0.48	+0.6
2,791,795	+		Echvi_2353	0.48	+0.9
2,791,795	+		Echvi_2353	0.48	+0.5
2,791,795	+		Echvi_2353	0.48	-0.6
2,791,795	+		Echvi_2353	0.48	+0.2
2,791,795	+		Echvi_2353	0.48	-2.8
2,791,795	+		Echvi_2353	0.48	-0.1
2,791,795	+		Echvi_2353	0.48	+0.1
2,791,795	+		Echvi_2353	0.48	-0.8
2,791,795	+		Echvi_2353	0.48	+0.5
2,791,795	+		Echvi_2353	0.48	+0.2
2,791,795	+		Echvi_2353	0.48	+0.3
2,791,796	-		Echvi_2353	0.48	+0.1
2,791,796	-		Echvi_2353	0.48	-0.9
2,791,796	-		Echvi_2353	0.48	+0.7
2,791,796	-		Echvi_2353	0.48	-0.3
2,791,796	-		Echvi_2353	0.48	-1.1
2,791,796	-		Echvi_2353	0.48	+0.1
2,791,796	-		Echvi_2353	0.48	+0.6
2,791,796	-		Echvi_2353	0.48	+0.4
2,791,796	-		Echvi_2353	0.48	+0.3
2,791,796	-				+1.1
2,791,796	-		Echvi_2353	0.48	-0.9
2,791,796	-		Echvi_2353	0.48	-0.1
2,791,796	-		Echvi_2353	0.48	+0.2
2,791,818	+		Echvi_2353	0.51	+0.2
2,791,888	-		Echvi_2353	0.63	+2.1
2,791,941	-		Echvi_2353	0.71	-0.5
2,791,984	+		Echvi_2353	0.78	-0.9
2,792,011	+		Echvi_2353	0.83	-0.4
2,792,011	+		Echvi_2353	0.83	+0.8
2,792,012	-		Echvi_2353	0.83	-0.3
2,792,093	+				-0.3
2,792,093	+				-1.9
2,792,094	-				+0.7
2,792,094	-				-0.6
2,792,094	-				+0.6
2,792,128	-				+0.5
2,792,128	-				-0.0
2,792,134	-				-0.9
2,792,172	+				-0.2
2,792,173	-				+0.1
2,792,173	-				+2.1
2,792,173	-				+1.1
2,792,173	-				-0.5
2,792,173	-				-1.2
2,792,173	-				+1.2
2,792,199	-				-0.3
2,792,199	-				+0.6
2,792,201	+				+0.4
2,792,226	+				+1.1
2,792,229	+				+1.2
2,792,229	+				-0.8
2,792,229	+				-1.4
2,792,229	+				-1.1
2,792,229	+				+0.7
2,792,230	-				+1.2
2,792,231	+				-0.9
2,792,458	+		Echvi_2354	0.14	+0.6
2,792,530	+		Echvi_2354	0.20	+1.0
2,792,543	+		Echvi_2354	0.21	+0.7
2,792,543	+		Echvi_2354	0.21	+0.7
2,792,545	+		Echvi_2354	0.21	+1.1
2,792,545	+		Echvi_2354	0.21	+0.0
2,792,574	-		Echvi_2354	0.23	+1.9
2,792,575	+		Echvi_2354	0.24	+0.6
2,792,575	+		Echvi_2354	0.24	-0.5
2,792,575	+		Echvi_2354	0.24	+0.4
2,792,576	-		Echvi_2354	0.24	+1.4
2,792,610	+		Echvi_2354	0.26	+1.8
2,792,611	-		Echvi_2354	0.26	-0.0
2,792,620	+		Echvi_2354	0.27	-0.4
2,792,688	-		Echvi_2354	0.33	-0.6
2,792,688	-		Echvi_2354	0.33	-0.9
2,792,828	+		Echvi_2354	0.44	+0.1
2,792,829	-		Echvi_2354	0.44	-0.4
2,792,852	+		Echvi_2354	0.46	-1.4
2,792,914	+		Echvi_2354	0.51	+0.6
2,792,914	+		Echvi_2354	0.51	-0.6
2,792,915	-		Echvi_2354	0.51	+0.5
2,792,917	+		Echvi_2354	0.51	+0.3
2,792,917	+		Echvi_2354	0.51	+1.5
2,792,917	+		Echvi_2354	0.51	+0.4
2,792,917	+		Echvi_2354	0.51	-1.6
2,792,918	-		Echvi_2354	0.51	-1.3
2,792,919	+		Echvi_2354	0.51	-0.5
2,792,920	-		Echvi_2354	0.51	-0.5
2,792,922	+		Echvi_2354	0.51	+1.0
2,792,923	-		Echvi_2354	0.51	-0.5
2,792,923	-		Echvi_2354	0.51	+0.3
2,793,061	+		Echvi_2354	0.63	-0.4
2,793,061	+		Echvi_2354	0.63	+1.7
2,793,104	-		Echvi_2354	0.66	-0.2
2,793,170	-		Echvi_2354	0.71	+1.4
2,793,170	-		Echvi_2354	0.71	+1.4
2,793,209	-		Echvi_2354	0.74	-0.3
2,793,209	-		Echvi_2354	0.74	-0.0
2,793,320	-		Echvi_2354	0.83	+0.5
2,793,433	+				+1.0
2,793,448	-				-1.6
2,793,457	-				-0.6
2,793,460	-				-1.3
2,793,496	-				+0.3
2,793,524	+				+1.6
2,793,564	+				-0.1
2,793,564	+				-1.4
2,793,565	-				-0.8
2,793,645	+		Echvi_2355	0.32	+0.4
2,793,646	-		Echvi_2355	0.33	-1.5
2,793,646	-		Echvi_2355	0.33	+0.1
2,793,648	-		Echvi_2355	0.33	+1.0
2,793,654	+		Echvi_2355	0.35	-0.1
2,793,655	-		Echvi_2355	0.35	+1.1
2,793,781	-		Echvi_2355	0.71	-0.8
2,793,781	-		Echvi_2355	0.71	-0.1
2,793,814	-		Echvi_2355	0.80	+1.3
2,793,814	-		Echvi_2355	0.80	-0.6
2,793,837	+		Echvi_2355	0.87	-0.6
2,793,837	+		Echvi_2355	0.87	+0.5
2,793,850	+				+1.2
2,793,904	+				-0.1
2,793,908	+				+0.1
2,793,908	+				+0.9
2,793,909	-				+0.8
2,793,909	-				-0.8
2,793,911	+				+0.1
2,793,912	-				-1.5
2,793,913	+				-1.9
2,793,942	-				+0.6
2,793,964	+				+0.4
2,794,025	+				+0.7
2,794,033	+				-0.4
2,794,033	+				+0.2
2,794,039	-				-2.3
2,794,042	+				+0.6
2,794,043	-				+0.4
2,794,080	+				-0.5
2,794,081	-				+1.5
2,794,081	-				+1.0
2,794,081	-				+1.5
2,794,147	+				-0.5
2,794,148	-				-0.2
2,794,151	+				-1.2
2,794,152	-				-0.5
2,794,168	+				-1.8
2,794,388	-		Echvi_2356	0.26	-1.1
2,794,388	-				+1.1
2,794,418	-		Echvi_2356	0.29	-0.5
2,794,418	-		Echvi_2356	0.29	-0.2
2,794,418	-		Echvi_2356	0.29	+0.8
2,794,526	-		Echvi_2356	0.37	+0.7
2,794,526	-		Echvi_2356	0.37	-2.4