Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1011

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
1,170,874	+				-0.8
1,170,887	+				-0.1
1,170,887	+				-0.1
1,170,887	+				-0.3
1,170,887	+				-0.7
1,170,888	-				-0.8
1,170,888	-				-2.0
1,170,901	+				-0.2
1,170,901	+				+1.5
1,170,981	+				+2.1
1,171,054	-		Echvi_1010	0.20	-1.4
1,171,062	+		Echvi_1010	0.21	-0.5
1,171,145	-		Echvi_1010	0.32	+0.9
1,171,237	-		Echvi_1010	0.45	-0.2
1,171,366	+		Echvi_1010	0.62	+2.6
1,171,366	+		Echvi_1010	0.62	+1.6
1,171,366	+		Echvi_1010	0.62	+0.1
1,171,366	+		Echvi_1010	0.62	+0.2
1,171,366	+		Echvi_1010	0.62	-0.1
1,171,366	+		Echvi_1010	0.62	+0.9
1,171,367	-		Echvi_1010	0.62	+0.4
1,171,367	-		Echvi_1010	0.62	-0.9
1,171,367	-		Echvi_1010	0.62	-0.5
1,171,367	-		Echvi_1010	0.62	+0.5
1,171,367	-		Echvi_1010	0.62	-0.4
1,171,368	+		Echvi_1010	0.62	-0.3
1,171,368	+		Echvi_1010	0.62	+2.8
1,171,369	-		Echvi_1010	0.63	+0.1
1,171,369	-		Echvi_1010	0.63	-0.6
1,171,378	+		Echvi_1010	0.64	-0.2
1,171,378	+		Echvi_1010	0.64	+0.2
1,171,378	+		Echvi_1010	0.64	-1.0
1,171,379	-		Echvi_1010	0.64	-1.2
1,171,379	-		Echvi_1010	0.64	+0.1
1,171,430	-		Echvi_1010	0.71	-1.2
1,171,442	-		Echvi_1010	0.73	-0.6
1,171,443	+		Echvi_1010	0.73	-0.5
1,171,443	+		Echvi_1010	0.73	-1.8
1,171,447	+		Echvi_1010	0.73	+0.7
1,171,508	+		Echvi_1010	0.82	+0.3
1,171,570	+				+2.6
1,171,571	-				+0.3
1,171,593	+				+0.0
1,171,594	-				+0.8
1,171,607	+				-0.4
1,171,607	+				-1.1
1,171,611	+				+0.2
1,171,611	+				+1.9
1,171,612	-				-1.1
1,171,612	-				-0.5
1,171,615	+				+1.1
1,171,615	+				+0.3
1,171,616	-				-0.5
1,171,619	+				-0.8
1,171,619	+				-0.9
1,171,619	+				+0.5
1,171,642	+				-0.1
1,171,757	-				+1.2
1,171,784	+				-0.8
1,171,785	-				+0.3
1,171,785	-				+2.8
1,171,799	+				-2.6
1,171,799	+				-0.2
1,171,799	+				+0.0
1,171,800	-				+2.9
1,171,800	-				-1.1
1,171,800	-				+0.4
1,171,819	+				+2.3
1,171,819	+				-1.4
1,171,819	+				+0.7
1,171,820	-				+0.3
1,171,820	-				+1.0
1,171,824	+				+0.6
1,171,843	-				+1.8
1,171,843	-				-1.0
1,171,860	-				+0.3
1,171,873	+				+0.4
1,171,873	+				-1.1
1,171,874	-				-2.1
1,171,874	-				+0.9
1,171,874	-				-1.1
1,171,874	-				-1.4
1,171,945	+		Echvi_1011	0.13	-2.4
1,171,946	-		Echvi_1011	0.13	+0.3
1,171,955	+		Echvi_1011	0.13	-2.2
1,171,958	-		Echvi_1011	0.13	-1.7
1,171,971	+		Echvi_1011	0.14	+0.8
1,172,095	+		Echvi_1011	0.23	-0.2
1,172,282	-		Echvi_1011	0.35	+1.2
1,172,502	+		Echvi_1011	0.50	+1.0
1,172,502	+		Echvi_1011	0.50	+0.9
1,172,512	+		Echvi_1011	0.50	-1.1
1,172,512	+		Echvi_1011	0.50	+2.5
1,172,512	+		Echvi_1011	0.50	+2.3
1,172,512	+		Echvi_1011	0.50	-2.2
1,172,512	+		Echvi_1011	0.50	+0.3
1,172,513	-		Echvi_1011	0.50	-2.1
1,172,513	-		Echvi_1011	0.50	+0.7
1,172,513	-		Echvi_1011	0.50	+1.6
1,172,513	-		Echvi_1011	0.50	+0.0
1,172,513	-		Echvi_1011	0.50	+0.9
1,172,513	-		Echvi_1011	0.50	-0.4
1,172,513	-		Echvi_1011	0.50	+1.0
1,172,514	+		Echvi_1011	0.50	-0.6
1,172,515	-		Echvi_1011	0.50	+1.1
1,172,524	+		Echvi_1011	0.51	+0.7
1,172,524	+		Echvi_1011	0.51	+0.3
1,172,720	-		Echvi_1011	0.64	+2.0
1,172,860	+		Echvi_1011	0.73	-0.3
1,172,860	+		Echvi_1011	0.73	-0.7
1,172,861	-		Echvi_1011	0.73	+0.5
1,172,911	+		Echvi_1011	0.77	-1.5
1,172,935	+		Echvi_1011	0.78	-0.4
1,172,936	-		Echvi_1011	0.78	-1.8
1,172,936	-		Echvi_1011	0.78	+2.1
1,172,936	-		Echvi_1011	0.78	+0.9
1,172,945	-		Echvi_1011	0.79	-0.0
1,172,951	+		Echvi_1011	0.79	+0.1
1,172,963	-		Echvi_1011	0.80	+0.5
1,172,963	-		Echvi_1011	0.80	-0.3
1,172,970	-		Echvi_1011	0.81	+1.0
1,172,985	-		Echvi_1011	0.82	-0.5
1,173,092	+		Echvi_1011	0.89	+0.3
1,173,092	+		Echvi_1011	0.89	+0.6
1,173,093	-		Echvi_1011	0.89	+0.5
1,173,165	+				+1.1
1,173,165	+				-1.2
1,173,166	-				-0.8
1,173,166	-				+1.1
1,173,166	-				+0.3
1,173,189	-				+0.3
1,173,189	-				+1.5
1,173,201	-				+1.6
1,173,204	+				+1.0
1,173,204	+				+0.1
1,173,205	-				+0.2
1,173,205	-				-0.1
1,173,213	-				-0.3
1,173,246	+				-1.0
1,173,246	+				-1.6
1,173,246	+				+0.3
1,173,247	-				+1.3
1,173,247	-				+0.1
1,173,298	-				-2.0
1,173,298	-				-0.0
1,173,349	-				-1.7
1,173,378	+				-0.5
1,173,378	+				+0.6
1,173,390	+				-0.7
1,173,391	-				+0.1
1,173,391	-				+0.6
1,173,392	+				+0.0
1,173,392	+				-1.6
1,173,392	+				+0.7
1,173,393	-				+1.8
1,173,406	+				-1.7
1,173,407	-				+0.8
1,173,413	+				+0.9
1,173,414	-				-0.5
1,173,472	+				-0.7
1,173,472	+				-0.2
1,173,473	-				-0.5
1,173,503	+				-1.1
1,173,528	+				+1.2
1,173,529	-				-0.7
1,173,551	+				-1.4
1,173,562	+				+1.0
1,173,566	-				-0.8
1,173,573	+				-0.1
1,173,576	+				-0.2
1,173,610	+				+1.1
1,173,613	+				-1.2
1,173,613	+				-0.8
1,173,614	-				+1.2
1,173,636	-				+0.0
1,173,732	+		Echvi_1012	0.13	-1.6
1,173,732	+		Echvi_1012	0.13	+0.5
1,173,732	+		Echvi_1012	0.13	-0.2
1,173,732	+		Echvi_1012	0.13	-1.9
1,173,732	+		Echvi_1012	0.13	-1.7
1,173,732	+		Echvi_1012	0.13	+1.5
1,173,732	+		Echvi_1012	0.13	-3.5
1,173,732	+		Echvi_1012	0.13	-0.7
1,173,732	+		Echvi_1012	0.13	+0.9
1,173,733	-		Echvi_1012	0.14	-0.5
1,173,733	-		Echvi_1012	0.14	-2.4
1,173,733	-		Echvi_1012	0.14	+0.2
1,173,733	-		Echvi_1012	0.14	+1.5
1,173,734	+		Echvi_1012	0.14	-1.2
1,173,734	+		Echvi_1012	0.14	+1.3
1,173,735	-		Echvi_1012	0.14	+1.0
1,173,886	-		Echvi_1012	0.20	-2.1
1,173,886	-		Echvi_1012	0.20	-0.3
1,173,897	+		Echvi_1012	0.20	-1.5
1,173,897	+		Echvi_1012	0.20	+0.4
1,173,916	+		Echvi_1012	0.21	+1.1
1,173,917	-		Echvi_1012	0.21	-0.4
1,174,043	+		Echvi_1012	0.26	-1.2
1,174,044	-		Echvi_1012	0.26	+0.3
1,174,044	-		Echvi_1012	0.26	+1.6
1,174,044	-		Echvi_1012	0.26	-1.7
1,174,044	-		Echvi_1012	0.26	+1.1
1,174,104	-		Echvi_1012	0.28	-0.7
1,174,116	+		Echvi_1012	0.29	+0.2
1,174,117	-		Echvi_1012	0.29	-0.0
1,174,141	+		Echvi_1012	0.30	+0.3
1,174,141	+		Echvi_1012	0.30	+0.0
1,174,142	-		Echvi_1012	0.30	+0.6
1,174,206	+		Echvi_1012	0.32	-1.6
1,174,207	-		Echvi_1012	0.32	+1.4
1,174,207	-		Echvi_1012	0.32	-0.5
1,174,230	+		Echvi_1012	0.33	-1.0