Experiment: m.b. Tetracycline 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20350 and CA264_20355 are separated by 110 nucleotides CA264_20355 and CA264_20360 are separated by 71 nucleotides CA264_20360 and CA264_20365 are separated by 595 nucleotides
CA264_20350: CA264_20350 - hypothetical protein, at 4,686,855 to 4,688,786
_20350
CA264_20355: CA264_20355 - DUF421 domain-containing protein, at 4,688,897 to 4,689,334
_20355
CA264_20360: CA264_20360 - thiol reductase thioredoxin, at 4,689,406 to 4,689,732
_20360
CA264_20365: CA264_20365 - DNA polymerase III subunit alpha, at 4,690,328 to 4,693,951
_20365
Position (kb)
4688
4689
4690 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4687.990 kb on - strand, within CA264_20350 at 4688.013 kb on + strand, within CA264_20350 at 4688.014 kb on - strand, within CA264_20350 at 4688.023 kb on + strand, within CA264_20350 at 4688.024 kb on - strand, within CA264_20350 at 4688.027 kb on + strand, within CA264_20350 at 4688.027 kb on + strand, within CA264_20350 at 4688.027 kb on + strand, within CA264_20350 at 4688.027 kb on + strand, within CA264_20350 at 4688.028 kb on - strand, within CA264_20350 at 4688.028 kb on - strand, within CA264_20350 at 4688.028 kb on - strand, within CA264_20350 at 4688.105 kb on - strand, within CA264_20350 at 4688.167 kb on - strand, within CA264_20350 at 4688.259 kb on + strand, within CA264_20350 at 4688.262 kb on - strand, within CA264_20350 at 4688.294 kb on - strand, within CA264_20350 at 4688.410 kb on - strand, within CA264_20350 at 4688.430 kb on + strand, within CA264_20350 at 4688.432 kb on + strand, within CA264_20350 at 4688.432 kb on + strand, within CA264_20350 at 4688.433 kb on - strand, within CA264_20350 at 4688.433 kb on - strand, within CA264_20350 at 4688.438 kb on - strand, within CA264_20350 at 4688.438 kb on - strand, within CA264_20350 at 4688.499 kb on + strand, within CA264_20350 at 4688.549 kb on + strand, within CA264_20350 at 4688.589 kb on + strand, within CA264_20350 at 4688.590 kb on - strand, within CA264_20350 at 4688.590 kb on - strand, within CA264_20350 at 4688.668 kb on + strand at 4688.669 kb on - strand at 4688.742 kb on + strand at 4688.785 kb on - strand at 4688.794 kb on - strand at 4688.796 kb on - strand at 4688.827 kb on + strand at 4689.008 kb on + strand, within CA264_20355 at 4689.009 kb on - strand, within CA264_20355 at 4689.009 kb on - strand, within CA264_20355 at 4689.009 kb on - strand, within CA264_20355 at 4689.009 kb on - strand, within CA264_20355 at 4689.076 kb on + strand, within CA264_20355 at 4689.117 kb on - strand, within CA264_20355 at 4689.166 kb on - strand, within CA264_20355 at 4689.229 kb on + strand, within CA264_20355 at 4689.259 kb on + strand, within CA264_20355 at 4689.773 kb on + strand at 4689.773 kb on + strand at 4689.776 kb on + strand at 4689.780 kb on + strand at 4689.785 kb on + strand at 4689.873 kb on - strand at 4689.878 kb on + strand at 4689.879 kb on - strand at 4689.879 kb on - strand at 4689.886 kb on + strand at 4689.887 kb on - strand at 4689.887 kb on - strand at 4689.887 kb on - strand at 4689.951 kb on + strand at 4689.952 kb on - strand at 4690.005 kb on + strand at 4690.043 kb on - strand at 4690.109 kb on - strand at 4690.130 kb on - strand at 4690.213 kb on + strand at 4690.242 kb on - strand at 4690.266 kb on + strand at 4690.268 kb on + strand at 4690.330 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.003 mg/ml remove 4,687,990 - CA264_20350 0.59 +0.0 4,688,013 + CA264_20350 0.60 +0.4 4,688,014 - CA264_20350 0.60 +1.0 4,688,023 + CA264_20350 0.60 -0.4 4,688,024 - CA264_20350 0.61 -0.2 4,688,027 + CA264_20350 0.61 -0.5 4,688,027 + CA264_20350 0.61 -0.8 4,688,027 + CA264_20350 0.61 -1.4 4,688,027 + CA264_20350 0.61 -0.2 4,688,028 - CA264_20350 0.61 +1.0 4,688,028 - CA264_20350 0.61 -0.4 4,688,028 - CA264_20350 0.61 +0.2 4,688,105 - CA264_20350 0.65 -0.7 4,688,167 - CA264_20350 0.68 -1.8 4,688,259 + CA264_20350 0.73 +2.1 4,688,262 - CA264_20350 0.73 +0.0 4,688,294 - CA264_20350 0.74 +0.4 4,688,410 - CA264_20350 0.80 -0.0 4,688,430 + CA264_20350 0.82 +0.3 4,688,432 + CA264_20350 0.82 +0.1 4,688,432 + CA264_20350 0.82 +0.8 4,688,433 - CA264_20350 0.82 -0.1 4,688,433 - CA264_20350 0.82 +2.1 4,688,438 - CA264_20350 0.82 +1.9 4,688,438 - CA264_20350 0.82 +0.0 4,688,499 + CA264_20350 0.85 -0.5 4,688,549 + CA264_20350 0.88 +0.8 4,688,589 + CA264_20350 0.90 +1.2 4,688,590 - CA264_20350 0.90 -0.0 4,688,590 - CA264_20350 0.90 -0.3 4,688,668 + +0.4 4,688,669 - +0.8 4,688,742 + -0.2 4,688,785 - -0.0 4,688,794 - +0.1 4,688,796 - -1.9 4,688,827 + -0.0 4,689,008 + CA264_20355 0.25 -0.0 4,689,009 - CA264_20355 0.26 -1.7 4,689,009 - CA264_20355 0.26 +1.0 4,689,009 - CA264_20355 0.26 -0.2 4,689,009 - CA264_20355 0.26 -0.5 4,689,076 + CA264_20355 0.41 +1.4 4,689,117 - CA264_20355 0.50 +1.4 4,689,166 - CA264_20355 0.61 +0.7 4,689,229 + CA264_20355 0.76 +0.2 4,689,259 + CA264_20355 0.83 +0.6 4,689,773 + +0.6 4,689,773 + +0.6 4,689,776 + -0.8 4,689,780 + +0.8 4,689,785 + +0.4 4,689,873 - +0.0 4,689,878 + +0.1 4,689,879 - +0.2 4,689,879 - +0.3 4,689,886 + -1.0 4,689,887 - +0.3 4,689,887 - +1.0 4,689,887 - +0.1 4,689,951 + -2.3 4,689,952 - +0.3 4,690,005 + -0.2 4,690,043 - +0.0 4,690,109 - +1.2 4,690,130 - +0.8 4,690,213 + +0.1 4,690,242 - +0.8 4,690,266 + +0.1 4,690,268 + +0.0 4,690,330 - -0.2
Or see this region's nucleotide sequence