Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07925

Experiment: NAG (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C); with MOPS
1,765,182	+		PFLU_RS07915	0.86	+1.5
1,765,182	+		PFLU_RS07915	0.86	-0.5
1,765,183	-		PFLU_RS07915	0.86	+0.1
1,765,183	-		PFLU_RS07915	0.86	-0.5
1,765,266	+				-0.7
1,765,284	+				-0.2
1,765,284	+				+1.0
1,765,285	-				-0.3
1,765,349	+				-0.5
1,765,349	+				+0.5
1,765,350	-		PFLU_RS07920	0.10	+1.3
1,765,350	-		PFLU_RS07920	0.10	+0.8
1,765,350	-		PFLU_RS07920	0.10	-0.2
1,765,370	+		PFLU_RS07920	0.12	-0.9
1,765,371	-		PFLU_RS07920	0.12	+1.0
1,765,378	+		PFLU_RS07920	0.13	-0.2
1,765,379	-		PFLU_RS07920	0.13	+1.4
1,765,379	-		PFLU_RS07920	0.13	+0.9
1,765,456	+		PFLU_RS07920	0.22	+0.4
1,765,456	+		PFLU_RS07920	0.22	-1.0
1,765,457	-		PFLU_RS07920	0.22	-0.2
1,765,457	-		PFLU_RS07920	0.22	-1.8
1,765,506	+		PFLU_RS07920	0.27	-0.8
1,765,507	-		PFLU_RS07920	0.27	+1.0
1,765,507	-		PFLU_RS07920	0.27	+1.3
1,765,537	+		PFLU_RS07920	0.31	-0.8
1,765,537	+		PFLU_RS07920	0.31	+0.8
1,765,537	+		PFLU_RS07920	0.31	-2.3
1,765,538	-		PFLU_RS07920	0.31	+0.0
1,765,588	+		PFLU_RS07920	0.36	+0.3
1,765,588	+		PFLU_RS07920	0.36	+0.7
1,765,589	-		PFLU_RS07920	0.36	+2.4
1,765,589	-		PFLU_RS07920	0.36	+0.6
1,765,653	+		PFLU_RS07920	0.43	+0.9
1,765,653	+		PFLU_RS07920	0.43	-0.4
1,765,654	-		PFLU_RS07920	0.44	-1.5
1,765,654	-		PFLU_RS07920	0.44	+0.2
1,765,654	-		PFLU_RS07920	0.44	-1.4
1,765,695	+		PFLU_RS07920	0.48	+0.9
1,765,695	+		PFLU_RS07920	0.48	+1.9
1,765,696	-		PFLU_RS07920	0.48	-1.6
1,765,696	-		PFLU_RS07920	0.48	+0.7
1,765,696	-		PFLU_RS07920	0.48	-0.9
1,765,696	-		PFLU_RS07920	0.48	+0.5
1,765,696	-		PFLU_RS07920	0.48	-1.2
1,765,727	+		PFLU_RS07920	0.52	+0.5
1,765,727	+		PFLU_RS07920	0.52	+1.0
1,765,727	+		PFLU_RS07920	0.52	+1.4
1,765,727	+		PFLU_RS07920	0.52	-1.4
1,765,727	+		PFLU_RS07920	0.52	+0.1
1,765,727	+		PFLU_RS07920	0.52	+0.2
1,765,727	+		PFLU_RS07920	0.52	+1.1
1,765,728	-		PFLU_RS07920	0.52	-0.5
1,765,728	-		PFLU_RS07920	0.52	+0.5
1,765,728	-		PFLU_RS07920	0.52	-0.1
1,765,731	+		PFLU_RS07920	0.52	-1.1
1,765,731	+		PFLU_RS07920	0.52	+0.9
1,765,731	+		PFLU_RS07920	0.52	-3.5
1,765,731	+		PFLU_RS07920	0.52	-0.2
1,765,731	+		PFLU_RS07920	0.52	+1.7
1,765,731	+		PFLU_RS07920	0.52	+0.3
1,765,731	+		PFLU_RS07920	0.52	-1.0
1,765,732	-		PFLU_RS07920	0.52	+1.2
1,765,732	-		PFLU_RS07920	0.52	-1.4
1,765,732	-		PFLU_RS07920	0.52	-2.5
1,765,736	+		PFLU_RS07920	0.53	-0.9
1,765,736	+		PFLU_RS07920	0.53	-0.1
1,765,736	+		PFLU_RS07920	0.53	+1.7
1,765,737	-		PFLU_RS07920	0.53	-0.1
1,765,737	-		PFLU_RS07920	0.53	-0.2
1,765,779	+		PFLU_RS07920	0.57	+1.2
1,765,839	+		PFLU_RS07920	0.64	-1.2
1,765,839	+		PFLU_RS07920	0.64	-0.8
1,765,839	+		PFLU_RS07920	0.64	+0.7
1,765,839	+		PFLU_RS07920	0.64	-1.1
1,765,839	+		PFLU_RS07920	0.64	+1.0
1,765,839	+		PFLU_RS07920	0.64	-0.1
1,765,839	+		PFLU_RS07920	0.64	-0.5
1,765,839	+		PFLU_RS07920	0.64	+0.7
1,765,839	+		PFLU_RS07920	0.64	+0.2
1,765,839	+		PFLU_RS07920	0.64	-0.2
1,765,839	+		PFLU_RS07920	0.64	+0.4
1,765,839	+		PFLU_RS07920	0.64	+0.7
1,765,839	+		PFLU_RS07920	0.64	-2.2
1,765,839	+		PFLU_RS07920	0.64	+0.7
1,765,839	+		PFLU_RS07920	0.64	-0.1
1,765,839	+		PFLU_RS07920	0.64	+1.3
1,765,839	+		PFLU_RS07920	0.64	-1.5
1,765,839	+		PFLU_RS07920	0.64	+0.1
1,765,840	-		PFLU_RS07920	0.64	+0.7
1,765,840	-		PFLU_RS07920	0.64	+0.4
1,765,840	-		PFLU_RS07920	0.64	+0.4
1,765,840	-		PFLU_RS07920	0.64	-2.2
1,765,840	-		PFLU_RS07920	0.64	-0.1
1,765,840	-		PFLU_RS07920	0.64	+1.6
1,765,840	-		PFLU_RS07920	0.64	-0.4
1,765,840	-		PFLU_RS07920	0.64	-0.5
1,765,840	-		PFLU_RS07920	0.64	-0.6
1,765,840	-		PFLU_RS07920	0.64	-2.0
1,765,840	-		PFLU_RS07920	0.64	+1.4
1,765,840	-		PFLU_RS07920	0.64	-0.8
1,765,840	-		PFLU_RS07920	0.64	+0.2
1,765,840	-		PFLU_RS07920	0.64	+0.4
1,765,840	-		PFLU_RS07920	0.64	+1.0
1,765,840	-		PFLU_RS07920	0.64	-1.2
1,765,840	-		PFLU_RS07920	0.64	+0.4
1,765,866	+		PFLU_RS07920	0.67	+0.1
1,765,866	+		PFLU_RS07920	0.67	-1.1
1,765,867	-		PFLU_RS07920	0.67	-0.7
1,765,867	-		PFLU_RS07920	0.67	-0.7
1,765,900	+		PFLU_RS07920	0.71	-0.3
1,765,900	+		PFLU_RS07920	0.71	+0.2
1,765,901	-		PFLU_RS07920	0.71	+0.5
1,765,901	-		PFLU_RS07920	0.71	-1.3
1,765,901	-		PFLU_RS07920	0.71	-1.9
1,765,901	-		PFLU_RS07920	0.71	-2.1
1,765,901	-		PFLU_RS07920	0.71	+1.7
1,765,901	-		PFLU_RS07920	0.71	-1.1
1,765,923	+		PFLU_RS07920	0.73	+0.5
1,765,923	+		PFLU_RS07920	0.73	+1.0
1,765,923	+		PFLU_RS07920	0.73	-1.1
1,765,923	+		PFLU_RS07920	0.73	+0.3
1,765,923	+		PFLU_RS07920	0.73	-0.7
1,765,924	-		PFLU_RS07920	0.73	+1.1
1,765,924	-		PFLU_RS07920	0.73	-0.0
1,765,924	-		PFLU_RS07920	0.73	-0.2
1,765,924	-		PFLU_RS07920	0.73	-1.1
1,765,924	-		PFLU_RS07920	0.73	+1.7
1,765,924	-		PFLU_RS07920	0.73	-1.1
1,765,924	-		PFLU_RS07920	0.73	+1.1
1,765,924	-		PFLU_RS07920	0.73	-0.8
1,765,924	-		PFLU_RS07920	0.73	+1.2
1,765,924	-		PFLU_RS07920	0.73	+2.1
1,765,924	-		PFLU_RS07920	0.73	-0.8
1,765,953	+		PFLU_RS07920	0.77	-0.3
1,765,953	+		PFLU_RS07920	0.77	-0.4
1,765,973	+		PFLU_RS07920	0.79	-0.5
1,765,973	+		PFLU_RS07920	0.79	+0.3
1,765,973	+		PFLU_RS07920	0.79	-2.2
1,765,973	+		PFLU_RS07920	0.79	-1.0
1,765,973	+		PFLU_RS07920	0.79	+0.9
1,765,973	+		PFLU_RS07920	0.79	+0.3
1,765,974	-		PFLU_RS07920	0.79	-0.6
1,765,974	-		PFLU_RS07920	0.79	-2.8
1,765,974	-		PFLU_RS07920	0.79	+0.9
1,765,974	-		PFLU_RS07920	0.79	-0.8
1,765,974	-		PFLU_RS07920	0.79	-2.5
1,765,974	-		PFLU_RS07920	0.79	-0.3
1,765,974	-		PFLU_RS07920	0.79	+0.3
1,765,974	-		PFLU_RS07920	0.79	-2.2
1,765,989	+		PFLU_RS07920	0.81	-0.3
1,765,989	+		PFLU_RS07920	0.81	-0.2
1,765,990	-		PFLU_RS07920	0.81	-1.0
1,765,990	-		PFLU_RS07920	0.81	+0.1
1,766,025	+		PFLU_RS07920	0.85	+0.8
1,766,041	+		PFLU_RS07920	0.86	-2.5
1,766,041	+		PFLU_RS07920	0.86	+1.0
1,766,041	+		PFLU_RS07920	0.86	-1.8
1,766,042	-		PFLU_RS07920	0.86	-1.7
1,766,139	-				-0.0
1,766,144	+				+1.8
1,766,144	+				+0.2
1,766,144	+				-0.3
1,766,144	+				+1.0
1,766,145	-				+0.2
1,766,145	-				+1.0
1,766,145	-				-1.0
1,766,145	-				-1.8
1,766,145	-				-1.1
1,766,145	-				+2.7
1,766,215	-				-0.7
1,766,425	+		PFLU_RS07925	0.10	+1.3
1,766,425	+		PFLU_RS07925	0.10	+1.4
1,766,426	-		PFLU_RS07925	0.10	-0.3
1,766,618	+		PFLU_RS07925	0.18	-0.9
1,766,618	+		PFLU_RS07925	0.18	+1.3
1,766,618	+		PFLU_RS07925	0.18	+0.8
1,766,631	+		PFLU_RS07925	0.18	+0.6
1,766,692	+		PFLU_RS07925	0.20	+0.4
1,766,692	+		PFLU_RS07925	0.20	-0.9
1,766,692	+		PFLU_RS07925	0.20	-1.3
1,766,692	+		PFLU_RS07925	0.20	-0.6
1,766,693	-		PFLU_RS07925	0.20	+0.7
1,766,693	-		PFLU_RS07925	0.20	+0.5
1,766,693	-		PFLU_RS07925	0.20	-0.5
1,766,693	-		PFLU_RS07925	0.20	+0.1
1,766,738	+		PFLU_RS07925	0.22	+0.1
1,766,738	+		PFLU_RS07925	0.22	+0.3
1,766,739	-		PFLU_RS07925	0.22	-0.0
1,766,739	-		PFLU_RS07925	0.22	+0.4
1,766,832	-		PFLU_RS07925	0.26	+0.0
1,766,832	-		PFLU_RS07925	0.26	+0.2
1,766,866	+		PFLU_RS07925	0.27	-1.5
1,766,866	+		PFLU_RS07925	0.27	-1.1
1,766,866	+		PFLU_RS07925	0.27	+0.7
1,766,866	+		PFLU_RS07925	0.27	-1.5
1,766,867	-		PFLU_RS07925	0.27	-0.6
1,766,900	+		PFLU_RS07925	0.28	+1.9
1,766,900	+		PFLU_RS07925	0.28	-0.6
1,766,901	-		PFLU_RS07925	0.28	+1.1
1,767,089	+		PFLU_RS07925	0.36	+1.3
1,767,089	+		PFLU_RS07925	0.36	-0.5
1,767,090	-		PFLU_RS07925	0.36	-0.9
1,767,090	-		PFLU_RS07925	0.36	+0.9
1,767,090	-		PFLU_RS07925	0.36	+0.4
1,767,183	-		PFLU_RS07925	0.39	-0.3
1,767,183	-		PFLU_RS07925	0.39	-0.4
1,767,254	+		PFLU_RS07925	0.42	+0.2
1,767,255	-		PFLU_RS07925	0.42	+0.1
1,767,255	-		PFLU_RS07925	0.42	+1.4
1,767,308	+		PFLU_RS07925	0.44	-0.5
1,767,308	+		PFLU_RS07925	0.44	-0.7
1,767,308	+		PFLU_RS07925	0.44	+0.0
1,767,309	-		PFLU_RS07925	0.44	+0.3
1,767,309	-		PFLU_RS07925	0.44	-0.0
1,767,309	-		PFLU_RS07925	0.44	+0.2
1,767,309	-		PFLU_RS07925	0.44	+1.9
1,767,311	+		PFLU_RS07925	0.44	+1.1
1,767,326	+		PFLU_RS07925	0.45	+0.9
1,767,327	-		PFLU_RS07925	0.45	+0.4
1,767,327	-		PFLU_RS07925	0.45	+0.5
1,767,327	-		PFLU_RS07925	0.45	+0.5
1,767,352	-		PFLU_RS07925	0.46	+1.0
1,767,352	-		PFLU_RS07925	0.46	+0.6
1,767,352	-		PFLU_RS07925	0.46	-1.4
1,767,515	+		PFLU_RS07925	0.52	+1.4
1,767,515	+		PFLU_RS07925	0.52	+0.6
1,767,515	+		PFLU_RS07925	0.52	+0.7
1,767,515	+		PFLU_RS07925	0.52	-0.7
1,767,515	+		PFLU_RS07925	0.52	+0.4
1,767,515	+		PFLU_RS07925	0.52	-0.3
1,767,515	+		PFLU_RS07925	0.52	-1.3
1,767,515	+		PFLU_RS07925	0.52	-0.2
1,767,515	+		PFLU_RS07925	0.52	-0.6
1,767,516	-		PFLU_RS07925	0.52	+2.7
1,767,516	-		PFLU_RS07925	0.52	-0.8
1,767,516	-		PFLU_RS07925	0.52	+1.2
1,767,589	-		PFLU_RS07925	0.55	+2.0
1,767,653	+		PFLU_RS07925	0.58	-0.6
1,767,680	+		PFLU_RS07925	0.59	-1.6
1,767,680	+		PFLU_RS07925	0.59	-0.5
1,767,680	+		PFLU_RS07925	0.59	+0.4
1,767,680	+		PFLU_RS07925	0.59	-1.4
1,767,680	+		PFLU_RS07925	0.59	-1.5
1,767,680	+		PFLU_RS07925	0.59	+0.5
1,767,680	+		PFLU_RS07925	0.59	-1.3
1,767,680	+		PFLU_RS07925	0.59	+1.8
1,767,680	+		PFLU_RS07925	0.59	-0.9
1,767,680	+		PFLU_RS07925	0.59	-0.3
1,767,680	+		PFLU_RS07925	0.59	-2.6
1,767,680	+		PFLU_RS07925	0.59	+0.9
1,767,680	+		PFLU_RS07925	0.59	+2.2
1,767,680	+		PFLU_RS07925	0.59	-0.3
1,767,681	-		PFLU_RS07925	0.59	-0.2
1,767,681	-		PFLU_RS07925	0.59	-1.1
1,767,681	-		PFLU_RS07925	0.59	-0.5
1,767,681	-		PFLU_RS07925	0.59	+1.0
1,767,681	-		PFLU_RS07925	0.59	-0.7
1,767,681	-		PFLU_RS07925	0.59	-0.0
1,767,681	-		PFLU_RS07925	0.59	-1.9
1,767,707	+		PFLU_RS07925	0.60	+0.8
1,767,708	-		PFLU_RS07925	0.60	+0.3
1,767,774	-		PFLU_RS07925	0.62	+0.3
1,767,827	+		PFLU_RS07925	0.64	-0.5
1,767,828	-		PFLU_RS07925	0.64	-0.0
1,767,828	-		PFLU_RS07925	0.64	-0.3
1,767,828	-		PFLU_RS07925	0.64	+0.5
1,767,871	-		PFLU_RS07925	0.66	-1.0
1,768,035	-		PFLU_RS07925	0.72	-0.3
1,768,196	+		PFLU_RS07925	0.79	+0.1
1,768,196	+		PFLU_RS07925	0.79	-1.3
1,768,196	+		PFLU_RS07925	0.79	+1.2
1,768,196	+		PFLU_RS07925	0.79	-0.7
1,768,197	-		PFLU_RS07925	0.79	+0.6
1,768,197	-		PFLU_RS07925	0.79	+1.0
1,768,197	-		PFLU_RS07925	0.79	-1.2
1,768,197	-		PFLU_RS07925	0.79	+0.3
1,768,197	-		PFLU_RS07925	0.79	-0.1
1,768,197	-		PFLU_RS07925	0.79	+3.3
1,768,197	-		PFLU_RS07925	0.79	-0.2
1,768,314	-		PFLU_RS07925	0.83	-1.5
1,768,319	+		PFLU_RS07925	0.84	+0.7
1,768,319	+		PFLU_RS07925	0.84	+0.7
1,768,319	+		PFLU_RS07925	0.84	+0.3
1,768,319	+		PFLU_RS07925	0.84	+1.9
1,768,319	+		PFLU_RS07925	0.84	-0.1
1,768,320	-		PFLU_RS07925	0.84	-1.7
1,768,320	-		PFLU_RS07925	0.84	-0.4
1,768,785	+				-0.6
1,768,824	+				+0.7
1,768,836	+				+0.5
1,768,836	+				-0.2
1,768,837	-				-1.9
1,768,837	-				-0.6
1,768,904	+		PFLU_RS07930	0.17	-1.5
1,768,904	+		PFLU_RS07930	0.17	-1.8
1,768,904	+		PFLU_RS07930	0.17	-2.2
1,768,904	+		PFLU_RS07930	0.17	-0.7
1,768,904	+		PFLU_RS07930	0.17	-0.6
1,768,904	+		PFLU_RS07930	0.17	+0.3
1,768,904	+		PFLU_RS07930	0.17	+1.2
1,768,904	+		PFLU_RS07930	0.17	-0.8
1,768,905	-		PFLU_RS07930	0.17	-0.1
1,768,905	-		PFLU_RS07930	0.17	-0.6
1,768,905	-		PFLU_RS07930	0.17	-0.9
1,768,905	-		PFLU_RS07930	0.17	-2.9
1,768,958	+		PFLU_RS07930	0.25	-0.1
1,768,958	+		PFLU_RS07930	0.25	+1.6
1,768,958	+		PFLU_RS07930	0.25	+0.6
1,768,958	+		PFLU_RS07930	0.25	-2.3
1,768,958	+		PFLU_RS07930	0.25	+0.3
1,768,959	-		PFLU_RS07930	0.25	+0.0
1,768,959	-		PFLU_RS07930	0.25	+0.1
1,768,959	-		PFLU_RS07930	0.25	-1.6
1,768,959	-		PFLU_RS07930	0.25	-2.1
1,768,959	-		PFLU_RS07930	0.25	-0.7
1,768,959	-		PFLU_RS07930	0.25	-3.0
1,768,979	-		PFLU_RS07930	0.28	-0.9
1,769,064	+		PFLU_RS07930	0.40	+0.0
1,769,064	+		PFLU_RS07930	0.40	+1.0
1,769,065	-		PFLU_RS07930	0.40	-1.5
1,769,065	-		PFLU_RS07930	0.40	-0.8
1,769,065	-		PFLU_RS07930	0.40	-1.2
1,769,326	-		PFLU_RS07930	0.78	+0.8
1,769,326	-		PFLU_RS07930	0.78	+0.1
1,769,385	+		PFLU_RS07930	0.86	+0.6
1,769,385	+		PFLU_RS07930	0.86	+0.1
1,769,385	+		PFLU_RS07930	0.86	-0.6
1,769,385	+		PFLU_RS07930	0.86	-0.5
1,769,385	+		PFLU_RS07930	0.86	-0.9
1,769,385	+		PFLU_RS07930	0.86	+0.5
1,769,385	+		PFLU_RS07930	0.86	+0.8
1,769,386	-		PFLU_RS07930	0.86	-2.9
1,769,386	-		PFLU_RS07930	0.86	-0.0
1,769,386	-		PFLU_RS07930	0.86	+0.5
1,769,386	-		PFLU_RS07930	0.86	-0.1
1,769,386	-		PFLU_RS07930	0.86	+1.3
1,769,386	-		PFLU_RS07930	0.86	+0.4
1,769,386	-		PFLU_RS07930	0.86	+1.0
1,769,386	-		PFLU_RS07930	0.86	-1.1
1,769,386	-		PFLU_RS07930	0.86	+1.4
1,769,386	-		PFLU_RS07930	0.86	-0.7
1,769,434	+				+0.2
1,769,435	-				+2.2
1,769,550	+				+0.6
1,769,550	+				+1.2
1,769,550	+				+1.1
1,769,550	+				+0.1
1,769,550	+				+1.1
1,769,550	+				-0.2
1,769,550	+				+0.1
1,769,550	+				-0.8
1,769,551	-				-1.9
1,769,551	-				-0.6
1,769,551	-				-0.3
1,769,551	-				+1.5
1,769,551	-				+0.8
1,769,551	-				-0.1
1,769,551	-				+0.4
1,769,551	-				+1.0
1,769,554	+				-2.2
1,769,554	+				-0.4
1,769,555	-				+0.5
1,769,555	-				-0.6
1,769,555	-				+2.0
1,769,555	-				+0.5
1,769,555	-				-0.3
1,769,555	-				+0.7
1,769,555	-				+0.2
1,769,555	-				+0.4
1,769,555	-				+0.2
1,769,556	+				+0.0
1,769,556	+				-0.7
1,769,556	+				-0.3
1,769,556	+				+0.9
1,769,556	+				-0.1
1,769,556	+				+1.2
1,769,556	+				-0.6
1,769,556	+				-0.5
1,769,557	-				+0.9
1,769,557	-				+0.7
1,769,557	-				+0.3
1,769,557	-				+1.0
1,769,557	-				-0.3
1,769,557	-				-0.5
1,769,557	-				+0.1
1,769,557	-				-2.3
1,769,557	-				-2.1
1,769,560	+				-2.1
1,769,561	-				+1.8
1,769,561	-				-1.2
1,769,664	+		PFLU_RS07935	0.20	+0.8
1,769,664	+		PFLU_RS07935	0.20	+0.4
1,769,664	+		PFLU_RS07935	0.20	-0.6
1,769,664	+		PFLU_RS07935	0.20	-1.2
1,769,664	+		PFLU_RS07935	0.20	+0.9
1,769,664	+		PFLU_RS07935	0.20	+1.1
1,769,665	-		PFLU_RS07935	0.20	+0.0