Experiment: NAG (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS03015 and PFLU_RS03020 are separated by 81 nucleotides PFLU_RS03020 and PFLU_RS03025 overlap by 4 nucleotides PFLU_RS03025 and PFLU_RS03030 are separated by 185 nucleotides
PFLU_RS03015: PFLU_RS03015 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH, at 695,158 to 696,765
_RS03015
PFLU_RS03020: PFLU_RS03020 - DNA-binding transcriptional regulator Fis, at 696,847 to 697,167
_RS03020
PFLU_RS03025: PFLU_RS03025 - tRNA dihydrouridine synthase DusB, at 697,164 to 698,177
_RS03025
PFLU_RS03030: PFLU_RS03030 - DUF3426 domain-containing protein, at 698,363 to 699,595
_RS03030
Position (kb) 697
698
699 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 696.185 kb on + strand, within PFLU_RS03015 at 696.185 kb on + strand, within PFLU_RS03015 at 696.185 kb on + strand, within PFLU_RS03015 at 696.186 kb on - strand, within PFLU_RS03015 at 696.186 kb on - strand, within PFLU_RS03015 at 696.186 kb on - strand, within PFLU_RS03015 at 696.816 kb on - strand at 696.848 kb on + strand at 697.207 kb on + strand at 697.208 kb on - strand at 697.208 kb on - strand at 697.253 kb on + strand at 697.313 kb on - strand, within PFLU_RS03025 at 697.342 kb on - strand, within PFLU_RS03025 at 697.342 kb on - strand, within PFLU_RS03025 at 697.360 kb on + strand, within PFLU_RS03025 at 697.361 kb on - strand, within PFLU_RS03025 at 697.361 kb on - strand, within PFLU_RS03025 at 697.361 kb on - strand, within PFLU_RS03025 at 697.389 kb on + strand, within PFLU_RS03025 at 697.390 kb on - strand, within PFLU_RS03025 at 697.398 kb on - strand, within PFLU_RS03025 at 697.432 kb on - strand, within PFLU_RS03025 at 697.432 kb on - strand, within PFLU_RS03025 at 697.622 kb on - strand, within PFLU_RS03025 at 697.639 kb on + strand, within PFLU_RS03025 at 697.680 kb on - strand, within PFLU_RS03025 at 698.062 kb on - strand, within PFLU_RS03025 at 698.062 kb on - strand, within PFLU_RS03025 at 698.062 kb on - strand, within PFLU_RS03025 at 698.062 kb on - strand, within PFLU_RS03025 at 698.153 kb on - strand at 698.153 kb on - strand at 698.153 kb on - strand at 698.178 kb on - strand at 698.178 kb on - strand at 698.178 kb on - strand at 698.208 kb on - strand at 698.286 kb on - strand at 698.322 kb on + strand at 698.322 kb on + strand at 698.323 kb on - strand at 698.329 kb on + strand at 698.330 kb on - strand at 698.391 kb on + strand at 698.391 kb on + strand at 698.391 kb on + strand at 698.391 kb on + strand at 698.392 kb on - strand at 698.404 kb on + strand at 698.405 kb on - strand at 698.434 kb on + strand at 698.435 kb on - strand at 698.435 kb on - strand at 698.490 kb on + strand, within PFLU_RS03030 at 698.491 kb on - strand, within PFLU_RS03030 at 698.491 kb on - strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.592 kb on + strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.593 kb on - strand, within PFLU_RS03030 at 698.642 kb on + strand, within PFLU_RS03030 at 698.642 kb on + strand, within PFLU_RS03030 at 698.643 kb on - strand, within PFLU_RS03030 at 698.643 kb on - strand, within PFLU_RS03030 at 698.643 kb on - strand, within PFLU_RS03030 at 698.653 kb on + strand, within PFLU_RS03030 at 698.695 kb on + strand, within PFLU_RS03030 at 698.695 kb on + strand, within PFLU_RS03030 at 698.696 kb on - strand, within PFLU_RS03030 at 698.696 kb on - strand, within PFLU_RS03030 at 698.779 kb on - strand, within PFLU_RS03030 at 698.779 kb on - strand, within PFLU_RS03030 at 698.779 kb on - strand, within PFLU_RS03030 at 698.779 kb on - strand, within PFLU_RS03030 at 698.865 kb on + strand, within PFLU_RS03030
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C); with MOPS remove 696,185 + PFLU_RS03015 0.64 +0.2 696,185 + PFLU_RS03015 0.64 +0.6 696,185 + PFLU_RS03015 0.64 +0.2 696,186 - PFLU_RS03015 0.64 +0.6 696,186 - PFLU_RS03015 0.64 +1.2 696,186 - PFLU_RS03015 0.64 +2.2 696,816 - -0.2 696,848 + -0.4 697,207 + +2.2 697,208 - +2.2 697,208 - +1.0 697,253 + +2.2 697,313 - PFLU_RS03025 0.15 -1.0 697,342 - PFLU_RS03025 0.18 +1.4 697,342 - PFLU_RS03025 0.18 -2.1 697,360 + PFLU_RS03025 0.19 +0.9 697,361 - PFLU_RS03025 0.19 +1.0 697,361 - PFLU_RS03025 0.19 +1.9 697,361 - PFLU_RS03025 0.19 +0.7 697,389 + PFLU_RS03025 0.22 +2.2 697,390 - PFLU_RS03025 0.22 +1.2 697,398 - PFLU_RS03025 0.23 -0.2 697,432 - PFLU_RS03025 0.26 +1.6 697,432 - PFLU_RS03025 0.26 -1.5 697,622 - PFLU_RS03025 0.45 -0.8 697,639 + PFLU_RS03025 0.47 +2.2 697,680 - PFLU_RS03025 0.51 +1.3 698,062 - PFLU_RS03025 0.89 +0.5 698,062 - PFLU_RS03025 0.89 +0.0 698,062 - PFLU_RS03025 0.89 -0.8 698,062 - PFLU_RS03025 0.89 +0.2 698,153 - +0.2 698,153 - -2.3 698,153 - -1.4 698,178 - -1.2 698,178 - +0.9 698,178 - -0.4 698,208 - +0.2 698,286 - +0.6 698,322 + +0.1 698,322 + +0.8 698,323 - +0.3 698,329 + -1.0 698,330 - +0.9 698,391 + +2.9 698,391 + -0.6 698,391 + +2.0 698,391 + +1.2 698,392 - -0.4 698,404 + +0.4 698,405 - +1.2 698,434 + +1.3 698,435 - +0.6 698,435 - +1.8 698,490 + PFLU_RS03030 0.10 +2.2 698,491 - PFLU_RS03030 0.10 -0.4 698,491 - PFLU_RS03030 0.10 +0.1 698,592 + PFLU_RS03030 0.19 +2.0 698,592 + PFLU_RS03030 0.19 +1.8 698,592 + PFLU_RS03030 0.19 +0.9 698,592 + PFLU_RS03030 0.19 +1.6 698,592 + PFLU_RS03030 0.19 +0.9 698,592 + PFLU_RS03030 0.19 +0.2 698,592 + PFLU_RS03030 0.19 +1.8 698,592 + PFLU_RS03030 0.19 +1.1 698,592 + PFLU_RS03030 0.19 +1.4 698,592 + PFLU_RS03030 0.19 +2.6 698,592 + PFLU_RS03030 0.19 +0.3 698,592 + PFLU_RS03030 0.19 +0.1 698,592 + PFLU_RS03030 0.19 -0.6 698,592 + PFLU_RS03030 0.19 +0.6 698,593 - PFLU_RS03030 0.19 +1.4 698,593 - PFLU_RS03030 0.19 +1.9 698,593 - PFLU_RS03030 0.19 -0.1 698,593 - PFLU_RS03030 0.19 +1.4 698,593 - PFLU_RS03030 0.19 +1.8 698,593 - PFLU_RS03030 0.19 +0.9 698,593 - PFLU_RS03030 0.19 +0.6 698,593 - PFLU_RS03030 0.19 +1.2 698,593 - PFLU_RS03030 0.19 +0.1 698,593 - PFLU_RS03030 0.19 -0.0 698,593 - PFLU_RS03030 0.19 +0.1 698,593 - PFLU_RS03030 0.19 +1.2 698,593 - PFLU_RS03030 0.19 +1.1 698,593 - PFLU_RS03030 0.19 +0.2 698,593 - PFLU_RS03030 0.19 -0.0 698,593 - PFLU_RS03030 0.19 +1.1 698,593 - PFLU_RS03030 0.19 +1.1 698,642 + PFLU_RS03030 0.23 -0.7 698,642 + PFLU_RS03030 0.23 +1.2 698,643 - PFLU_RS03030 0.23 -0.6 698,643 - PFLU_RS03030 0.23 +2.0 698,643 - PFLU_RS03030 0.23 -0.4 698,653 + PFLU_RS03030 0.24 -0.5 698,695 + PFLU_RS03030 0.27 -1.1 698,695 + PFLU_RS03030 0.27 +1.4 698,696 - PFLU_RS03030 0.27 -0.9 698,696 - PFLU_RS03030 0.27 +1.7 698,779 - PFLU_RS03030 0.34 +0.6 698,779 - PFLU_RS03030 0.34 -1.1 698,779 - PFLU_RS03030 0.34 +1.9 698,779 - PFLU_RS03030 0.34 -0.1 698,865 + PFLU_RS03030 0.41 +1.2
Or see this region's nucleotide sequence