Experiment: NAG (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02360 and PFLU_RS02365 are separated by 59 nucleotides PFLU_RS02365 and PFLU_RS02370 overlap by 4 nucleotides PFLU_RS02370 and PFLU_RS02375 are separated by 54 nucleotides
PFLU_RS02360: PFLU_RS02360 - PIG-L family deacetylase, at 539,724 to 541,124
_RS02360
PFLU_RS02365: PFLU_RS02365 - glycosyltransferase, at 541,184 to 542,332
_RS02365
PFLU_RS02370: PFLU_RS02370 - glycosyltransferase, at 542,329 to 543,210
_RS02370
PFLU_RS02375: PFLU_RS02375 - polymerase, at 543,265 to 545,127
_RS02375
Position (kb) 541
542
543 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 540.312 kb on + strand, within PFLU_RS02360 at 540.313 kb on - strand, within PFLU_RS02360 at 540.313 kb on - strand, within PFLU_RS02360 at 540.376 kb on - strand, within PFLU_RS02360 at 540.376 kb on - strand, within PFLU_RS02360 at 540.499 kb on - strand, within PFLU_RS02360 at 540.737 kb on + strand, within PFLU_RS02360 at 540.737 kb on + strand, within PFLU_RS02360 at 540.737 kb on + strand, within PFLU_RS02360 at 540.738 kb on - strand, within PFLU_RS02360 at 540.738 kb on - strand, within PFLU_RS02360 at 540.738 kb on - strand, within PFLU_RS02360 at 540.738 kb on - strand, within PFLU_RS02360 at 540.738 kb on - strand, within PFLU_RS02360 at 540.738 kb on - strand, within PFLU_RS02360 at 540.738 kb on - strand, within PFLU_RS02360 at 540.808 kb on - strand, within PFLU_RS02360 at 540.827 kb on + strand, within PFLU_RS02360 at 540.827 kb on + strand, within PFLU_RS02360 at 540.827 kb on + strand, within PFLU_RS02360 at 540.828 kb on - strand, within PFLU_RS02360 at 541.007 kb on - strand at 541.007 kb on - strand at 541.007 kb on - strand at 541.027 kb on + strand at 541.028 kb on - strand at 541.028 kb on - strand at 541.183 kb on + strand at 541.184 kb on - strand at 541.223 kb on + strand at 541.223 kb on + strand at 541.223 kb on + strand at 541.224 kb on - strand at 541.368 kb on - strand, within PFLU_RS02365 at 541.368 kb on - strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.427 kb on + strand, within PFLU_RS02365 at 541.428 kb on - strand, within PFLU_RS02365 at 541.428 kb on - strand, within PFLU_RS02365 at 541.428 kb on - strand, within PFLU_RS02365 at 541.428 kb on - strand, within PFLU_RS02365 at 541.428 kb on - strand, within PFLU_RS02365 at 541.428 kb on - strand, within PFLU_RS02365 at 541.428 kb on - strand, within PFLU_RS02365 at 541.433 kb on + strand, within PFLU_RS02365 at 541.433 kb on + strand, within PFLU_RS02365 at 541.434 kb on - strand, within PFLU_RS02365 at 541.434 kb on - strand, within PFLU_RS02365 at 541.646 kb on + strand, within PFLU_RS02365 at 541.868 kb on + strand, within PFLU_RS02365 at 541.868 kb on + strand, within PFLU_RS02365 at 541.868 kb on + strand, within PFLU_RS02365 at 541.869 kb on - strand, within PFLU_RS02365 at 541.994 kb on + strand, within PFLU_RS02365 at 541.994 kb on + strand, within PFLU_RS02365 at 541.994 kb on + strand, within PFLU_RS02365 at 541.994 kb on + strand, within PFLU_RS02365 at 541.995 kb on - strand, within PFLU_RS02365 at 541.995 kb on - strand, within PFLU_RS02365 at 541.995 kb on - strand, within PFLU_RS02365 at 541.995 kb on - strand, within PFLU_RS02365 at 541.995 kb on - strand, within PFLU_RS02365 at 541.995 kb on - strand, within PFLU_RS02365 at 542.011 kb on + strand, within PFLU_RS02365 at 542.012 kb on - strand, within PFLU_RS02365 at 542.012 kb on - strand, within PFLU_RS02365 at 542.189 kb on + strand, within PFLU_RS02365 at 542.189 kb on + strand, within PFLU_RS02365 at 542.189 kb on + strand, within PFLU_RS02365 at 542.189 kb on + strand, within PFLU_RS02365 at 542.189 kb on + strand, within PFLU_RS02365 at 542.189 kb on + strand, within PFLU_RS02365 at 542.190 kb on - strand, within PFLU_RS02365 at 542.190 kb on - strand, within PFLU_RS02365 at 542.190 kb on - strand, within PFLU_RS02365 at 542.190 kb on - strand, within PFLU_RS02365 at 542.190 kb on - strand, within PFLU_RS02365 at 542.190 kb on - strand, within PFLU_RS02365 at 542.190 kb on - strand, within PFLU_RS02365 at 542.190 kb on - strand, within PFLU_RS02365 at 542.190 kb on - strand, within PFLU_RS02365 at 542.286 kb on - strand at 542.286 kb on - strand at 542.319 kb on + strand at 542.319 kb on + strand at 542.319 kb on + strand at 542.319 kb on + strand at 542.319 kb on + strand at 542.319 kb on + strand at 542.319 kb on + strand at 542.319 kb on + strand at 542.319 kb on + strand at 542.319 kb on + strand at 542.320 kb on - strand at 542.320 kb on - strand at 542.320 kb on - strand at 542.320 kb on - strand at 542.320 kb on - strand at 542.320 kb on - strand at 542.320 kb on - strand at 542.323 kb on + strand at 542.324 kb on - strand at 542.324 kb on - strand at 542.371 kb on + strand at 542.371 kb on + strand at 542.371 kb on + strand at 542.371 kb on + strand at 542.372 kb on - strand at 542.386 kb on + strand at 542.386 kb on + strand at 542.387 kb on - strand at 542.387 kb on - strand at 542.388 kb on + strand at 542.389 kb on - strand at 542.650 kb on + strand, within PFLU_RS02370 at 542.651 kb on - strand, within PFLU_RS02370 at 542.651 kb on - strand, within PFLU_RS02370 at 542.651 kb on - strand, within PFLU_RS02370 at 542.651 kb on - strand, within PFLU_RS02370 at 542.651 kb on - strand, within PFLU_RS02370 at 542.651 kb on - strand, within PFLU_RS02370 at 542.917 kb on + strand, within PFLU_RS02370 at 542.977 kb on + strand, within PFLU_RS02370 at 542.977 kb on + strand, within PFLU_RS02370 at 542.977 kb on + strand, within PFLU_RS02370 at 542.978 kb on - strand, within PFLU_RS02370 at 542.978 kb on - strand, within PFLU_RS02370 at 542.978 kb on - strand, within PFLU_RS02370 at 542.978 kb on - strand, within PFLU_RS02370 at 542.992 kb on + strand, within PFLU_RS02370 at 542.992 kb on + strand, within PFLU_RS02370 at 542.992 kb on + strand, within PFLU_RS02370 at 542.992 kb on + strand, within PFLU_RS02370 at 542.992 kb on + strand, within PFLU_RS02370 at 542.992 kb on + strand, within PFLU_RS02370 at 542.993 kb on - strand, within PFLU_RS02370 at 542.993 kb on - strand, within PFLU_RS02370 at 542.993 kb on - strand, within PFLU_RS02370 at 542.993 kb on - strand, within PFLU_RS02370 at 542.993 kb on - strand, within PFLU_RS02370 at 543.019 kb on + strand, within PFLU_RS02370 at 543.020 kb on - strand, within PFLU_RS02370 at 543.020 kb on - strand, within PFLU_RS02370 at 543.046 kb on + strand, within PFLU_RS02370 at 543.047 kb on - strand, within PFLU_RS02370 at 543.047 kb on - strand, within PFLU_RS02370 at 543.061 kb on + strand, within PFLU_RS02370 at 543.062 kb on - strand, within PFLU_RS02370 at 543.185 kb on + strand at 543.185 kb on + strand at 543.186 kb on - strand at 543.186 kb on - strand at 543.187 kb on + strand at 543.188 kb on - strand at 543.188 kb on - strand at 543.188 kb on - strand at 543.188 kb on - strand at 543.213 kb on + strand at 543.238 kb on + strand at 543.250 kb on + strand at 543.250 kb on + strand at 543.251 kb on - strand at 543.251 kb on - strand at 543.263 kb on + strand at 543.264 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C); with MOPS remove 540,312 + PFLU_RS02360 0.42 +0.7 540,313 - PFLU_RS02360 0.42 -1.1 540,313 - PFLU_RS02360 0.42 -0.1 540,376 - PFLU_RS02360 0.47 -1.9 540,376 - PFLU_RS02360 0.47 -2.1 540,499 - PFLU_RS02360 0.55 +1.1 540,737 + PFLU_RS02360 0.72 +0.7 540,737 + PFLU_RS02360 0.72 +1.0 540,737 + PFLU_RS02360 0.72 -1.1 540,738 - PFLU_RS02360 0.72 -0.2 540,738 - PFLU_RS02360 0.72 -1.2 540,738 - PFLU_RS02360 0.72 +1.9 540,738 - PFLU_RS02360 0.72 -1.5 540,738 - PFLU_RS02360 0.72 -1.6 540,738 - PFLU_RS02360 0.72 -0.5 540,738 - PFLU_RS02360 0.72 -1.4 540,808 - PFLU_RS02360 0.77 +0.8 540,827 + PFLU_RS02360 0.79 +0.7 540,827 + PFLU_RS02360 0.79 +0.6 540,827 + PFLU_RS02360 0.79 +0.3 540,828 - PFLU_RS02360 0.79 -1.7 541,007 - -0.7 541,007 - +1.3 541,007 - -0.7 541,027 + -0.9 541,028 - +0.6 541,028 - -1.4 541,183 + -2.6 541,184 - -3.2 541,223 + -3.8 541,223 + -2.1 541,223 + -2.2 541,224 - -3.4 541,368 - PFLU_RS02365 0.16 -2.1 541,368 - PFLU_RS02365 0.16 -1.4 541,427 + PFLU_RS02365 0.21 -4.1 541,427 + PFLU_RS02365 0.21 -2.3 541,427 + PFLU_RS02365 0.21 -3.7 541,427 + PFLU_RS02365 0.21 -2.5 541,427 + PFLU_RS02365 0.21 -3.2 541,427 + PFLU_RS02365 0.21 -2.5 541,427 + PFLU_RS02365 0.21 -2.5 541,427 + PFLU_RS02365 0.21 -0.3 541,427 + PFLU_RS02365 0.21 -4.0 541,427 + PFLU_RS02365 0.21 -1.3 541,427 + PFLU_RS02365 0.21 -2.2 541,427 + PFLU_RS02365 0.21 -2.9 541,427 + PFLU_RS02365 0.21 -1.6 541,427 + PFLU_RS02365 0.21 -3.0 541,427 + PFLU_RS02365 0.21 -4.0 541,428 - PFLU_RS02365 0.21 -1.7 541,428 - PFLU_RS02365 0.21 -3.2 541,428 - PFLU_RS02365 0.21 -3.2 541,428 - PFLU_RS02365 0.21 -1.9 541,428 - PFLU_RS02365 0.21 -2.5 541,428 - PFLU_RS02365 0.21 -1.3 541,428 - PFLU_RS02365 0.21 -3.6 541,433 + PFLU_RS02365 0.22 -3.6 541,433 + PFLU_RS02365 0.22 -0.3 541,434 - PFLU_RS02365 0.22 -4.1 541,434 - PFLU_RS02365 0.22 -0.5 541,646 + PFLU_RS02365 0.40 -4.1 541,868 + PFLU_RS02365 0.60 -0.1 541,868 + PFLU_RS02365 0.60 -2.3 541,868 + PFLU_RS02365 0.60 -2.1 541,869 - PFLU_RS02365 0.60 -0.7 541,994 + PFLU_RS02365 0.70 -3.7 541,994 + PFLU_RS02365 0.70 +2.3 541,994 + PFLU_RS02365 0.70 -1.6 541,994 + PFLU_RS02365 0.70 -3.4 541,995 - PFLU_RS02365 0.71 -3.0 541,995 - PFLU_RS02365 0.71 -1.4 541,995 - PFLU_RS02365 0.71 -2.5 541,995 - PFLU_RS02365 0.71 -2.1 541,995 - PFLU_RS02365 0.71 -3.3 541,995 - PFLU_RS02365 0.71 -2.5 542,011 + PFLU_RS02365 0.72 -3.9 542,012 - PFLU_RS02365 0.72 -3.1 542,012 - PFLU_RS02365 0.72 -0.3 542,189 + PFLU_RS02365 0.87 -3.4 542,189 + PFLU_RS02365 0.87 -1.9 542,189 + PFLU_RS02365 0.87 -2.8 542,189 + PFLU_RS02365 0.87 -1.3 542,189 + PFLU_RS02365 0.87 -2.3 542,189 + PFLU_RS02365 0.87 -2.6 542,190 - PFLU_RS02365 0.88 -2.2 542,190 - PFLU_RS02365 0.88 -3.4 542,190 - PFLU_RS02365 0.88 -0.6 542,190 - PFLU_RS02365 0.88 -3.7 542,190 - PFLU_RS02365 0.88 -3.4 542,190 - PFLU_RS02365 0.88 -2.9 542,190 - PFLU_RS02365 0.88 -2.1 542,190 - PFLU_RS02365 0.88 +0.7 542,190 - PFLU_RS02365 0.88 -2.4 542,286 - -2.1 542,286 - -3.2 542,319 + -0.7 542,319 + -2.5 542,319 + -1.8 542,319 + -0.4 542,319 + +1.3 542,319 + +0.7 542,319 + -0.6 542,319 + -2.9 542,319 + -0.2 542,319 + -1.2 542,320 - -2.9 542,320 - -4.5 542,320 - -0.8 542,320 - -2.8 542,320 - -0.7 542,320 - -1.3 542,320 - -0.3 542,323 + -1.5 542,324 - -1.8 542,324 - -4.6 542,371 + -4.0 542,371 + -2.1 542,371 + -0.1 542,371 + -0.5 542,372 - +0.3 542,386 + -1.8 542,386 + -2.3 542,387 - -1.8 542,387 - -3.1 542,388 + -2.5 542,389 - -4.1 542,650 + PFLU_RS02370 0.36 -2.6 542,651 - PFLU_RS02370 0.37 -1.6 542,651 - PFLU_RS02370 0.37 -1.7 542,651 - PFLU_RS02370 0.37 -1.9 542,651 - PFLU_RS02370 0.37 -1.3 542,651 - PFLU_RS02370 0.37 -4.1 542,651 - PFLU_RS02370 0.37 -3.2 542,917 + PFLU_RS02370 0.67 -1.6 542,977 + PFLU_RS02370 0.73 -4.5 542,977 + PFLU_RS02370 0.73 -0.1 542,977 + PFLU_RS02370 0.73 -2.4 542,978 - PFLU_RS02370 0.74 -2.7 542,978 - PFLU_RS02370 0.74 -1.0 542,978 - PFLU_RS02370 0.74 -1.8 542,978 - PFLU_RS02370 0.74 -2.8 542,992 + PFLU_RS02370 0.75 -3.0 542,992 + PFLU_RS02370 0.75 -3.2 542,992 + PFLU_RS02370 0.75 -3.2 542,992 + PFLU_RS02370 0.75 -2.8 542,992 + PFLU_RS02370 0.75 -4.1 542,992 + PFLU_RS02370 0.75 -3.8 542,993 - PFLU_RS02370 0.75 -0.3 542,993 - PFLU_RS02370 0.75 -3.5 542,993 - PFLU_RS02370 0.75 -3.6 542,993 - PFLU_RS02370 0.75 -2.3 542,993 - PFLU_RS02370 0.75 -3.9 543,019 + PFLU_RS02370 0.78 -2.8 543,020 - PFLU_RS02370 0.78 -1.0 543,020 - PFLU_RS02370 0.78 -1.7 543,046 + PFLU_RS02370 0.81 -2.4 543,047 - PFLU_RS02370 0.81 -2.9 543,047 - PFLU_RS02370 0.81 -1.5 543,061 + PFLU_RS02370 0.83 -0.8 543,062 - PFLU_RS02370 0.83 -2.4 543,185 + -2.2 543,185 + -0.1 543,186 - -1.8 543,186 - -0.9 543,187 + -0.6 543,188 - -2.4 543,188 - -0.1 543,188 - -1.8 543,188 - -0.7 543,213 + +0.8 543,238 + -1.2 543,250 + +1.0 543,250 + +0.8 543,251 - +0.4 543,251 - +1.0 543,263 + +0.1 543,264 - +0.2
Or see this region's nucleotide sequence