Experiment: NAG (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS01490 and PFLU_RS01495 are separated by 16 nucleotides PFLU_RS01495 and PFLU_RS01500 overlap by 1 nucleotides PFLU_RS01500 and PFLU_RS01505 are separated by 17 nucleotides
PFLU_RS01490: PFLU_RS01490 - cellulose biosynthesis protein BcsC, at 333,944 to 337,783
_RS01490
PFLU_RS01495: PFLU_RS01495 - SGNH/GDSL hydrolase family protein, at 337,800 to 338,465
_RS01495
PFLU_RS01500: PFLU_RS01500 - cell division protein FtsQ, at 338,465 to 339,130
_RS01500
PFLU_RS01505: PFLU_RS01505 - MBOAT family protein, at 339,148 to 340,563
_RS01505
Position (kb) 338
339
340 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 337.471 kb on - strand at 337.496 kb on - strand at 337.566 kb on - strand at 337.566 kb on - strand at 337.640 kb on + strand at 337.640 kb on + strand at 337.640 kb on + strand at 337.640 kb on + strand at 337.641 kb on - strand at 337.704 kb on - strand at 337.704 kb on - strand at 337.712 kb on + strand at 337.739 kb on - strand at 337.786 kb on - strand at 337.826 kb on - strand at 337.837 kb on + strand at 337.853 kb on + strand at 337.853 kb on + strand at 337.853 kb on + strand at 337.853 kb on + strand at 337.854 kb on - strand at 337.854 kb on - strand at 337.854 kb on - strand at 337.854 kb on - strand at 338.019 kb on + strand, within PFLU_RS01495 at 338.019 kb on + strand, within PFLU_RS01495 at 338.020 kb on - strand, within PFLU_RS01495 at 338.020 kb on - strand, within PFLU_RS01495 at 338.118 kb on + strand, within PFLU_RS01495 at 338.118 kb on + strand, within PFLU_RS01495 at 338.118 kb on + strand, within PFLU_RS01495 at 338.118 kb on + strand, within PFLU_RS01495 at 338.119 kb on - strand, within PFLU_RS01495 at 338.119 kb on - strand, within PFLU_RS01495 at 338.119 kb on - strand, within PFLU_RS01495 at 338.244 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.313 kb on + strand, within PFLU_RS01495 at 338.314 kb on - strand, within PFLU_RS01495 at 338.314 kb on - strand, within PFLU_RS01495 at 338.314 kb on - strand, within PFLU_RS01495 at 338.314 kb on - strand, within PFLU_RS01495 at 338.314 kb on - strand, within PFLU_RS01495 at 338.314 kb on - strand, within PFLU_RS01495 at 338.314 kb on - strand, within PFLU_RS01495 at 338.314 kb on - strand, within PFLU_RS01495 at 338.415 kb on - strand at 338.446 kb on - strand at 338.463 kb on + strand at 338.464 kb on - strand at 338.464 kb on - strand at 338.516 kb on + strand at 338.516 kb on + strand at 338.707 kb on - strand, within PFLU_RS01500 at 339.059 kb on + strand, within PFLU_RS01500 at 339.066 kb on + strand at 339.066 kb on + strand at 339.067 kb on - strand at 339.205 kb on + strand at 339.205 kb on + strand at 339.205 kb on + strand at 339.205 kb on + strand at 339.206 kb on - strand at 339.206 kb on - strand at 339.206 kb on - strand at 339.265 kb on + strand at 339.265 kb on + strand at 339.266 kb on - strand at 339.424 kb on + strand, within PFLU_RS01505 at 339.424 kb on + strand, within PFLU_RS01505 at 339.424 kb on + strand, within PFLU_RS01505 at 339.424 kb on + strand, within PFLU_RS01505 at 339.424 kb on + strand, within PFLU_RS01505 at 339.425 kb on - strand, within PFLU_RS01505 at 339.425 kb on - strand, within PFLU_RS01505 at 339.430 kb on + strand, within PFLU_RS01505 at 339.430 kb on + strand, within PFLU_RS01505 at 339.431 kb on - strand, within PFLU_RS01505 at 339.431 kb on - strand, within PFLU_RS01505 at 339.431 kb on - strand, within PFLU_RS01505 at 339.431 kb on - strand, within PFLU_RS01505 at 339.476 kb on - strand, within PFLU_RS01505 at 339.576 kb on + strand, within PFLU_RS01505 at 339.576 kb on + strand, within PFLU_RS01505 at 339.576 kb on + strand, within PFLU_RS01505 at 339.577 kb on - strand, within PFLU_RS01505 at 339.577 kb on - strand, within PFLU_RS01505 at 339.603 kb on + strand, within PFLU_RS01505 at 339.603 kb on + strand, within PFLU_RS01505 at 339.603 kb on + strand, within PFLU_RS01505 at 339.607 kb on + strand, within PFLU_RS01505 at 339.607 kb on + strand, within PFLU_RS01505 at 339.607 kb on + strand, within PFLU_RS01505 at 339.607 kb on + strand, within PFLU_RS01505 at 339.607 kb on + strand, within PFLU_RS01505 at 339.607 kb on + strand, within PFLU_RS01505 at 339.607 kb on + strand, within PFLU_RS01505 at 339.607 kb on + strand, within PFLU_RS01505 at 339.607 kb on + strand, within PFLU_RS01505 at 339.607 kb on + strand, within PFLU_RS01505 at 339.608 kb on - strand, within PFLU_RS01505 at 339.608 kb on - strand, within PFLU_RS01505 at 339.608 kb on - strand, within PFLU_RS01505 at 339.608 kb on - strand, within PFLU_RS01505 at 339.608 kb on - strand, within PFLU_RS01505 at 339.608 kb on - strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.616 kb on + strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.617 kb on - strand, within PFLU_RS01505 at 339.618 kb on + strand, within PFLU_RS01505 at 339.618 kb on + strand, within PFLU_RS01505 at 339.618 kb on + strand, within PFLU_RS01505 at 339.618 kb on + strand, within PFLU_RS01505 at 339.619 kb on - strand, within PFLU_RS01505 at 339.619 kb on - strand, within PFLU_RS01505 at 339.619 kb on - strand, within PFLU_RS01505 at 339.619 kb on - strand, within PFLU_RS01505 at 339.883 kb on + strand, within PFLU_RS01505 at 340.021 kb on + strand, within PFLU_RS01505 at 340.021 kb on + strand, within PFLU_RS01505 at 340.022 kb on - strand, within PFLU_RS01505 at 340.022 kb on - strand, within PFLU_RS01505 at 340.027 kb on + strand, within PFLU_RS01505 at 340.027 kb on + strand, within PFLU_RS01505 at 340.027 kb on + strand, within PFLU_RS01505 at 340.027 kb on + strand, within PFLU_RS01505 at 340.027 kb on + strand, within PFLU_RS01505 at 340.027 kb on + strand, within PFLU_RS01505 at 340.027 kb on + strand, within PFLU_RS01505 at 340.028 kb on + strand, within PFLU_RS01505 at 340.028 kb on - strand, within PFLU_RS01505 at 340.028 kb on - strand, within PFLU_RS01505 at 340.028 kb on - strand, within PFLU_RS01505 at 340.028 kb on - strand, within PFLU_RS01505 at 340.028 kb on - strand, within PFLU_RS01505 at 340.028 kb on - strand, within PFLU_RS01505 at 340.069 kb on + strand, within PFLU_RS01505 at 340.069 kb on + strand, within PFLU_RS01505 at 340.069 kb on + strand, within PFLU_RS01505
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C); with MOPS remove 337,471 - -0.3 337,496 - +0.8 337,566 - +0.9 337,566 - -3.2 337,640 + -0.8 337,640 + +1.0 337,640 + -0.1 337,640 + -0.2 337,641 - -1.1 337,704 - +0.7 337,704 - +1.4 337,712 + -0.0 337,739 - +0.4 337,786 - -0.7 337,826 - -0.0 337,837 + -0.4 337,853 + +1.2 337,853 + -0.8 337,853 + +0.2 337,853 + -2.4 337,854 - +0.6 337,854 - +0.2 337,854 - +1.4 337,854 - -0.6 338,019 + PFLU_RS01495 0.33 +0.4 338,019 + PFLU_RS01495 0.33 -2.2 338,020 - PFLU_RS01495 0.33 +2.5 338,020 - PFLU_RS01495 0.33 -1.5 338,118 + PFLU_RS01495 0.48 -0.1 338,118 + PFLU_RS01495 0.48 +0.1 338,118 + PFLU_RS01495 0.48 +0.3 338,118 + PFLU_RS01495 0.48 -0.3 338,119 - PFLU_RS01495 0.48 +2.1 338,119 - PFLU_RS01495 0.48 +0.7 338,119 - PFLU_RS01495 0.48 -0.1 338,244 + PFLU_RS01495 0.67 +0.3 338,313 + PFLU_RS01495 0.77 +1.5 338,313 + PFLU_RS01495 0.77 -2.1 338,313 + PFLU_RS01495 0.77 +0.9 338,313 + PFLU_RS01495 0.77 -0.0 338,313 + PFLU_RS01495 0.77 -1.6 338,313 + PFLU_RS01495 0.77 +1.6 338,313 + PFLU_RS01495 0.77 -0.3 338,313 + PFLU_RS01495 0.77 -1.1 338,313 + PFLU_RS01495 0.77 -0.7 338,313 + PFLU_RS01495 0.77 +0.8 338,313 + PFLU_RS01495 0.77 -1.3 338,313 + PFLU_RS01495 0.77 +0.6 338,313 + PFLU_RS01495 0.77 +0.3 338,314 - PFLU_RS01495 0.77 -1.6 338,314 - PFLU_RS01495 0.77 +0.2 338,314 - PFLU_RS01495 0.77 +0.6 338,314 - PFLU_RS01495 0.77 -0.3 338,314 - PFLU_RS01495 0.77 +2.4 338,314 - PFLU_RS01495 0.77 -0.4 338,314 - PFLU_RS01495 0.77 +0.5 338,314 - PFLU_RS01495 0.77 -1.9 338,415 - -0.6 338,446 - +1.3 338,463 + -0.9 338,464 - +0.2 338,464 - -0.0 338,516 + +0.4 338,516 + -0.7 338,707 - PFLU_RS01500 0.36 +1.8 339,059 + PFLU_RS01500 0.89 +1.8 339,066 + -0.6 339,066 + +0.8 339,067 - -1.5 339,205 + +1.7 339,205 + -0.8 339,205 + -2.4 339,205 + +2.1 339,206 - -1.5 339,206 - -0.5 339,206 - -2.6 339,265 + +0.2 339,265 + -0.9 339,266 - +0.3 339,424 + PFLU_RS01505 0.19 +0.2 339,424 + PFLU_RS01505 0.19 +0.2 339,424 + PFLU_RS01505 0.19 -0.0 339,424 + PFLU_RS01505 0.19 -1.5 339,424 + PFLU_RS01505 0.19 +1.3 339,425 - PFLU_RS01505 0.20 +0.5 339,425 - PFLU_RS01505 0.20 -0.8 339,430 + PFLU_RS01505 0.20 +0.3 339,430 + PFLU_RS01505 0.20 -1.8 339,431 - PFLU_RS01505 0.20 +0.6 339,431 - PFLU_RS01505 0.20 +0.7 339,431 - PFLU_RS01505 0.20 +1.3 339,431 - PFLU_RS01505 0.20 +1.8 339,476 - PFLU_RS01505 0.23 -1.1 339,576 + PFLU_RS01505 0.30 +0.8 339,576 + PFLU_RS01505 0.30 +1.3 339,576 + PFLU_RS01505 0.30 +1.9 339,577 - PFLU_RS01505 0.30 +2.3 339,577 - PFLU_RS01505 0.30 -0.1 339,603 + PFLU_RS01505 0.32 +1.3 339,603 + PFLU_RS01505 0.32 +0.7 339,603 + PFLU_RS01505 0.32 +0.2 339,607 + PFLU_RS01505 0.32 +0.8 339,607 + PFLU_RS01505 0.32 -0.4 339,607 + PFLU_RS01505 0.32 +0.5 339,607 + PFLU_RS01505 0.32 -1.1 339,607 + PFLU_RS01505 0.32 +0.5 339,607 + PFLU_RS01505 0.32 -0.8 339,607 + PFLU_RS01505 0.32 +0.9 339,607 + PFLU_RS01505 0.32 +0.4 339,607 + PFLU_RS01505 0.32 +0.9 339,607 + PFLU_RS01505 0.32 +4.1 339,608 - PFLU_RS01505 0.32 -1.0 339,608 - PFLU_RS01505 0.32 -0.0 339,608 - PFLU_RS01505 0.32 +0.1 339,608 - PFLU_RS01505 0.32 +0.2 339,608 - PFLU_RS01505 0.32 +1.7 339,608 - PFLU_RS01505 0.32 -0.2 339,616 + PFLU_RS01505 0.33 +0.7 339,616 + PFLU_RS01505 0.33 -1.1 339,616 + PFLU_RS01505 0.33 +0.1 339,616 + PFLU_RS01505 0.33 +0.6 339,616 + PFLU_RS01505 0.33 +0.5 339,616 + PFLU_RS01505 0.33 +0.3 339,616 + PFLU_RS01505 0.33 +0.2 339,616 + PFLU_RS01505 0.33 +0.3 339,616 + PFLU_RS01505 0.33 -0.5 339,616 + PFLU_RS01505 0.33 +1.1 339,616 + PFLU_RS01505 0.33 -0.1 339,616 + PFLU_RS01505 0.33 -0.7 339,616 + PFLU_RS01505 0.33 +2.1 339,616 + PFLU_RS01505 0.33 +0.4 339,616 + PFLU_RS01505 0.33 +1.5 339,616 + PFLU_RS01505 0.33 -0.4 339,616 + PFLU_RS01505 0.33 +0.4 339,616 + PFLU_RS01505 0.33 +0.3 339,617 - PFLU_RS01505 0.33 -0.2 339,617 - PFLU_RS01505 0.33 +3.1 339,617 - PFLU_RS01505 0.33 -0.4 339,617 - PFLU_RS01505 0.33 +0.4 339,617 - PFLU_RS01505 0.33 +1.7 339,617 - PFLU_RS01505 0.33 +0.8 339,617 - PFLU_RS01505 0.33 +0.2 339,617 - PFLU_RS01505 0.33 +0.3 339,617 - PFLU_RS01505 0.33 -2.5 339,617 - PFLU_RS01505 0.33 -0.9 339,617 - PFLU_RS01505 0.33 +0.3 339,617 - PFLU_RS01505 0.33 +1.1 339,617 - PFLU_RS01505 0.33 -0.3 339,617 - PFLU_RS01505 0.33 -1.5 339,617 - PFLU_RS01505 0.33 -0.7 339,617 - PFLU_RS01505 0.33 +1.1 339,618 + PFLU_RS01505 0.33 +0.4 339,618 + PFLU_RS01505 0.33 +1.7 339,618 + PFLU_RS01505 0.33 +0.5 339,618 + PFLU_RS01505 0.33 +1.2 339,619 - PFLU_RS01505 0.33 +0.2 339,619 - PFLU_RS01505 0.33 +1.2 339,619 - PFLU_RS01505 0.33 +0.4 339,619 - PFLU_RS01505 0.33 +0.3 339,883 + PFLU_RS01505 0.52 +0.7 340,021 + PFLU_RS01505 0.62 -2.4 340,021 + PFLU_RS01505 0.62 +0.7 340,022 - PFLU_RS01505 0.62 +0.3 340,022 - PFLU_RS01505 0.62 +0.3 340,027 + PFLU_RS01505 0.62 -0.0 340,027 + PFLU_RS01505 0.62 -0.2 340,027 + PFLU_RS01505 0.62 -0.7 340,027 + PFLU_RS01505 0.62 -2.3 340,027 + PFLU_RS01505 0.62 +1.4 340,027 + PFLU_RS01505 0.62 +0.5 340,027 + PFLU_RS01505 0.62 -0.5 340,028 + PFLU_RS01505 0.62 -0.1 340,028 - PFLU_RS01505 0.62 +0.6 340,028 - PFLU_RS01505 0.62 +0.5 340,028 - PFLU_RS01505 0.62 +0.5 340,028 - PFLU_RS01505 0.62 +1.2 340,028 - PFLU_RS01505 0.62 -0.8 340,028 - PFLU_RS01505 0.62 -0.8 340,069 + PFLU_RS01505 0.65 -0.2 340,069 + PFLU_RS01505 0.65 -0.5 340,069 + PFLU_RS01505 0.65 -2.0
Or see this region's nucleotide sequence