Experiment: m.b. Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17320 and CA264_17325 overlap by 23 nucleotides CA264_17325 and CA264_17330 are separated by 136 nucleotides
CA264_17320: CA264_17320 - hypothetical protein, at 4,033,806 to 4,036,313
_17320
CA264_17325: CA264_17325 - isoleucine--tRNA ligase, at 4,036,291 to 4,039,644
_17325
CA264_17330: CA264_17330 - lipoprotein signal peptidase, at 4,039,781 to 4,040,404
_17330
Position (kb)
4036
4037
4038
4039
4040 Strain fitness (log2 ratio)
-1
0
1
2 at 4035.365 kb on + strand, within CA264_17320 at 4035.394 kb on + strand, within CA264_17320 at 4035.395 kb on - strand, within CA264_17320 at 4035.476 kb on - strand, within CA264_17320 at 4035.490 kb on + strand, within CA264_17320 at 4035.491 kb on - strand, within CA264_17320 at 4035.491 kb on - strand, within CA264_17320 at 4035.530 kb on + strand, within CA264_17320 at 4035.590 kb on + strand, within CA264_17320 at 4035.701 kb on + strand, within CA264_17320 at 4035.727 kb on + strand, within CA264_17320 at 4035.752 kb on + strand, within CA264_17320 at 4035.753 kb on - strand, within CA264_17320 at 4035.767 kb on - strand, within CA264_17320 at 4035.797 kb on - strand, within CA264_17320 at 4035.807 kb on - strand, within CA264_17320 at 4035.854 kb on + strand, within CA264_17320 at 4035.854 kb on + strand, within CA264_17320 at 4035.863 kb on - strand, within CA264_17320 at 4035.874 kb on + strand, within CA264_17320 at 4035.874 kb on + strand, within CA264_17320 at 4035.874 kb on + strand, within CA264_17320 at 4035.875 kb on - strand, within CA264_17320 at 4035.921 kb on + strand, within CA264_17320 at 4035.923 kb on + strand, within CA264_17320 at 4035.923 kb on + strand, within CA264_17320 at 4035.924 kb on - strand, within CA264_17320 at 4035.924 kb on - strand, within CA264_17320 at 4036.012 kb on - strand, within CA264_17320 at 4036.081 kb on + strand at 4036.082 kb on - strand at 4036.136 kb on + strand at 4036.136 kb on + strand at 4036.137 kb on - strand at 4036.137 kb on - strand at 4036.167 kb on + strand at 4036.167 kb on + strand at 4036.167 kb on + strand at 4036.171 kb on + strand at 4036.171 kb on + strand at 4036.171 kb on + strand at 4036.172 kb on - strand at 4036.172 kb on - strand at 4036.172 kb on - strand at 4036.172 kb on - strand at 4036.264 kb on + strand at 4039.646 kb on + strand at 4039.678 kb on + strand at 4039.692 kb on + strand at 4039.693 kb on - strand at 4039.694 kb on + strand at 4039.717 kb on + strand at 4039.720 kb on + strand at 4039.721 kb on - strand at 4039.742 kb on - strand at 4039.742 kb on - strand at 4039.749 kb on - strand at 4039.769 kb on + strand at 4040.410 kb on + strand at 4040.410 kb on + strand at 4040.410 kb on + strand at 4040.427 kb on - strand at 4040.490 kb on + strand at 4040.523 kb on + strand at 4040.532 kb on - strand at 4040.560 kb on + strand at 4040.560 kb on + strand at 4040.573 kb on - strand at 4040.573 kb on - strand at 4040.575 kb on - strand at 4040.614 kb on + strand at 4040.614 kb on + strand at 4040.614 kb on + strand at 4040.615 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.001 mg/ml remove 4,035,365 + CA264_17320 0.62 +0.8 4,035,394 + CA264_17320 0.63 +1.0 4,035,395 - CA264_17320 0.63 +0.9 4,035,476 - CA264_17320 0.67 +1.1 4,035,490 + CA264_17320 0.67 +0.2 4,035,491 - CA264_17320 0.67 -0.4 4,035,491 - CA264_17320 0.67 +0.6 4,035,530 + CA264_17320 0.69 +0.5 4,035,590 + CA264_17320 0.71 +0.4 4,035,701 + CA264_17320 0.76 +0.9 4,035,727 + CA264_17320 0.77 +0.3 4,035,752 + CA264_17320 0.78 +0.6 4,035,753 - CA264_17320 0.78 -1.0 4,035,767 - CA264_17320 0.78 +0.9 4,035,797 - CA264_17320 0.79 +0.4 4,035,807 - CA264_17320 0.80 +0.9 4,035,854 + CA264_17320 0.82 +0.5 4,035,854 + CA264_17320 0.82 +0.7 4,035,863 - CA264_17320 0.82 +2.1 4,035,874 + CA264_17320 0.82 +0.4 4,035,874 + CA264_17320 0.82 +1.1 4,035,874 + CA264_17320 0.82 +0.7 4,035,875 - CA264_17320 0.82 +0.1 4,035,921 + CA264_17320 0.84 -0.0 4,035,923 + CA264_17320 0.84 +1.0 4,035,923 + CA264_17320 0.84 +0.1 4,035,924 - CA264_17320 0.84 +0.6 4,035,924 - CA264_17320 0.84 +0.5 4,036,012 - CA264_17320 0.88 +0.9 4,036,081 + +1.0 4,036,082 - -0.3 4,036,136 + +1.0 4,036,136 + +0.8 4,036,137 - +0.5 4,036,137 - +2.4 4,036,167 + +1.5 4,036,167 + +0.9 4,036,167 + +0.5 4,036,171 + +1.1 4,036,171 + +0.4 4,036,171 + +0.9 4,036,172 - +0.7 4,036,172 - +0.6 4,036,172 - +2.7 4,036,172 - +0.5 4,036,264 + +1.6 4,039,646 + +1.0 4,039,678 + +0.7 4,039,692 + +1.2 4,039,693 - -0.5 4,039,694 + +1.0 4,039,717 + +1.4 4,039,720 + -0.3 4,039,721 - +1.2 4,039,742 - +0.0 4,039,742 - +2.1 4,039,749 - +0.9 4,039,769 + +0.9 4,040,410 + -0.8 4,040,410 + +0.5 4,040,410 + -0.5 4,040,427 - +0.1 4,040,490 + -0.5 4,040,523 + -0.4 4,040,532 - +0.1 4,040,560 + -1.7 4,040,560 + -1.1 4,040,573 - -0.4 4,040,573 - -0.5 4,040,575 - -0.2 4,040,614 + -0.1 4,040,614 + +0.1 4,040,614 + -0.5 4,040,615 - +0.5
Or see this region's nucleotide sequence