Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS30565

Experiment: NAG (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C); with MOPS
2,095,137	+				-1.8
2,095,138	-				-1.2
2,095,138	-				+0.7
2,095,138	-				-2.0
2,095,138	-				+0.9
2,095,138	-				-0.0
2,095,138	-				+0.3
2,095,147	+				+0.4
2,095,147	+				-0.8
2,095,147	+				-1.2
2,095,147	+				-0.4
2,095,148	-				-1.5
2,095,148	-				-1.8
2,095,293	-				+0.2
2,095,319	-				-0.1
2,095,418	-		PFLU_RS09470	0.38	+0.7
2,095,418	-		PFLU_RS09470	0.38	-2.5
2,095,433	+		PFLU_RS09470	0.43	+0.5
2,095,433	+		PFLU_RS09470	0.43	+1.5
2,095,434	-		PFLU_RS09470	0.43	-1.3
2,095,434	-		PFLU_RS09470	0.43	-0.5
2,095,434	-		PFLU_RS09470	0.43	+1.7
2,095,434	-		PFLU_RS09470	0.43	-1.0
2,095,448	+		PFLU_RS09470	0.48	-1.1
2,095,480	+		PFLU_RS09470	0.57	-0.8
2,095,480	+		PFLU_RS09470	0.57	-2.6
2,095,480	+		PFLU_RS09470	0.57	-0.1
2,095,480	+		PFLU_RS09470	0.57	+1.8
2,095,480	+		PFLU_RS09470	0.57	-0.7
2,095,481	-		PFLU_RS09470	0.58	+0.3
2,095,481	-		PFLU_RS09470	0.58	+0.2
2,095,481	-		PFLU_RS09470	0.58	-0.7
2,095,481	-		PFLU_RS09470	0.58	-0.1
2,095,538	-		PFLU_RS09470	0.75	+1.4
2,095,605	+				+0.4
2,095,605	+				-2.5
2,095,605	+				+0.5
2,095,606	-				+0.3
2,095,623	+				+0.7
2,095,623	+				-1.5
2,095,623	+				+0.3
2,095,623	+				-0.7
2,095,623	+				-1.0
2,095,623	+				+1.2
2,095,623	+				-0.3
2,095,623	+				+0.6
2,095,623	+				-0.4
2,095,623	+				-0.8
2,095,624	-				+0.7
2,095,624	-				-1.1
2,095,624	-				+0.4
2,095,624	-				+1.7
2,095,624	-				+0.6
2,095,624	-				+1.3
2,095,624	-				+0.1
2,095,624	-				+1.1
2,095,624	-				+1.0
2,095,624	-				+0.6
2,095,624	-				-0.3
2,095,748	-				+2.0
2,095,795	+				+0.2
2,095,831	+				+1.5
2,095,832	-				-2.3
2,095,851	-				+1.2
2,095,851	-				-0.4
2,095,891	+				-1.1
2,095,891	+				-0.3
2,095,891	+				-1.4
2,095,892	-				+1.9
2,095,892	-				-0.3
2,095,892	-				-0.7
2,095,896	-				+0.3
2,095,896	-				+0.4
2,095,910	+				+1.6
2,095,911	-				-1.0
2,095,926	+				+0.7
2,095,926	+				+0.6
2,096,022	+				+0.8
2,096,023	-				-0.1
2,096,025	+				-0.9
2,096,025	+				-0.7
2,096,025	+				-0.8
2,096,026	-				-1.7
2,096,026	-				-1.5
2,096,026	-				-0.6
2,096,030	+				+1.5
2,096,031	-				+1.5
2,096,125	+		PFLU_RS30565	0.13	+1.0
2,096,125	+		PFLU_RS30565	0.13	-0.5
2,096,125	+		PFLU_RS30565	0.13	-0.2
2,096,125	+		PFLU_RS30565	0.13	+0.5
2,096,125	+		PFLU_RS30565	0.13	-1.3
2,096,126	-		PFLU_RS30565	0.13	-0.8
2,096,136	+		PFLU_RS30565	0.16	-2.5
2,096,136	+		PFLU_RS30565	0.16	-1.4
2,096,137	-		PFLU_RS30565	0.16	+0.6
2,096,137	-		PFLU_RS30565	0.16	+0.2
2,096,137	-		PFLU_RS30565	0.16	-2.0
2,096,137	-		PFLU_RS30565	0.16	-1.4
2,096,207	+		PFLU_RS30565	0.36	-0.4
2,096,207	+		PFLU_RS30565	0.36	+0.4
2,096,207	+		PFLU_RS30565	0.36	-1.3
2,096,207	+		PFLU_RS30565	0.36	+0.5
2,096,207	+		PFLU_RS30565	0.36	+0.3
2,096,208	-		PFLU_RS30565	0.36	+0.7
2,096,208	-		PFLU_RS30565	0.36	+2.9
2,096,208	-		PFLU_RS30565	0.36	-0.5
2,096,208	-		PFLU_RS30565	0.36	+0.2
2,096,211	+		PFLU_RS30565	0.37	+1.1
2,096,211	+		PFLU_RS30565	0.37	-0.5
2,096,212	-		PFLU_RS30565	0.37	+1.3
2,096,212	-		PFLU_RS30565	0.37	+0.6
2,096,212	-		PFLU_RS30565	0.37	+0.6
2,096,212	-		PFLU_RS30565	0.37	+1.9
2,096,212	-		PFLU_RS30565	0.37	-0.9
2,096,280	+		PFLU_RS30565	0.55	+0.6
2,096,280	+		PFLU_RS30565	0.55	-1.4
2,096,281	-		PFLU_RS30565	0.56	-1.3
2,096,290	-		PFLU_RS30565	0.58	-1.9
2,096,327	+		PFLU_RS30565	0.68	+0.6
2,096,330	+		PFLU_RS30565	0.69	+0.7
2,096,330	+		PFLU_RS30565	0.69	-0.8
2,096,367	+		PFLU_RS30565	0.79	+0.1
2,096,394	+		PFLU_RS30565	0.87	-2.2
2,096,394	+		PFLU_RS30565	0.87	-1.9
2,096,394	+		PFLU_RS30565	0.87	+1.2
2,096,395	-		PFLU_RS30565	0.87	-0.8
2,096,421	+				+1.0
2,096,422	-				+0.6
2,096,422	-				+0.2
2,096,440	+				-1.5
2,096,440	+				-1.1
2,096,441	-				-0.2
2,096,441	-				-0.8
2,096,452	+				+1.5
2,096,574	+				-0.0
2,096,574	+				-0.5
2,096,574	+				-1.4
2,096,574	+				-1.2
2,096,574	+				-0.8
2,096,574	+				-2.4
2,096,575	-				-0.6
2,096,575	-				+1.8
2,096,579	+				-0.1
2,096,579	+				+0.1
2,096,579	+				+0.2
2,096,579	+				+0.0
2,096,579	+				-1.8
2,096,580	-				-0.6
2,096,580	-				+0.8
2,096,580	-				-1.2
2,096,580	-				+0.7
2,096,581	+				-2.7
2,096,604	+				+2.0
2,096,647	+		PFLU_RS09475	0.13	+0.1
2,096,737	+		PFLU_RS09475	0.18	+0.9
2,096,737	+		PFLU_RS09475	0.18	-0.3
2,096,737	+		PFLU_RS09475	0.18	+0.0
2,096,738	-		PFLU_RS09475	0.18	-1.3
2,096,738	-		PFLU_RS09475	0.18	-0.4
2,096,738	-		PFLU_RS09475	0.18	+0.1
2,096,738	-		PFLU_RS09475	0.18	-1.4
2,096,738	-		PFLU_RS09475	0.18	-0.0
2,096,738	-		PFLU_RS09475	0.18	-0.3
2,096,738	-		PFLU_RS09475	0.18	+0.3
2,096,802	+		PFLU_RS09475	0.23	+2.0
2,096,802	+		PFLU_RS09475	0.23	+1.0
2,096,802	+		PFLU_RS09475	0.23	-0.3
2,096,802	+		PFLU_RS09475	0.23	-0.1
2,096,802	+		PFLU_RS09475	0.23	-1.8
2,096,803	-		PFLU_RS09475	0.23	-0.1
2,096,803	-		PFLU_RS09475	0.23	+0.3
2,096,848	+		PFLU_RS09475	0.25	+1.1
2,096,848	+		PFLU_RS09475	0.25	-0.6
2,096,849	-		PFLU_RS09475	0.26	-1.3
2,096,849	-		PFLU_RS09475	0.26	-0.1
2,096,852	+		PFLU_RS09475	0.26	+0.7
2,096,852	+		PFLU_RS09475	0.26	-2.4
2,096,852	+		PFLU_RS09475	0.26	+0.3
2,096,852	+		PFLU_RS09475	0.26	-0.6
2,096,852	+		PFLU_RS09475	0.26	-1.6
2,096,853	-		PFLU_RS09475	0.26	+0.3
2,096,853	-		PFLU_RS09475	0.26	-3.5
2,096,853	-		PFLU_RS09475	0.26	-2.1
2,096,999	+		PFLU_RS09475	0.35	-2.0
2,096,999	+		PFLU_RS09475	0.35	-0.5
2,096,999	+		PFLU_RS09475	0.35	-0.0
2,096,999	+		PFLU_RS09475	0.35	+0.4
2,096,999	+		PFLU_RS09475	0.35	-0.2
2,097,000	-		PFLU_RS09475	0.35	-0.6
2,097,000	-		PFLU_RS09475	0.35	-0.1
2,097,000	-		PFLU_RS09475	0.35	-0.5
2,097,000	-		PFLU_RS09475	0.35	-0.4
2,097,041	-		PFLU_RS09475	0.38	-1.8
2,097,041	-		PFLU_RS09475	0.38	-0.3
2,097,041	-		PFLU_RS09475	0.38	-2.0
2,097,049	+		PFLU_RS09475	0.38	+0.1
2,097,068	+		PFLU_RS09475	0.40	-0.3
2,097,068	+		PFLU_RS09475	0.40	+1.1
2,097,068	+		PFLU_RS09475	0.40	+0.6
2,097,068	+		PFLU_RS09475	0.40	+0.3
2,097,068	+		PFLU_RS09475	0.40	+0.6
2,097,068	+		PFLU_RS09475	0.40	-2.5
2,097,068	+		PFLU_RS09475	0.40	+0.8
2,097,069	-		PFLU_RS09475	0.40	+0.6
2,097,069	-		PFLU_RS09475	0.40	+0.7
2,097,069	-		PFLU_RS09475	0.40	-0.6
2,097,069	-		PFLU_RS09475	0.40	-0.1
2,097,340	+		PFLU_RS09475	0.57	-2.5
2,097,341	-		PFLU_RS09475	0.57	+0.2
2,097,341	-		PFLU_RS09475	0.57	-0.3
2,097,343	+		PFLU_RS09475	0.57	+0.9
2,097,364	+		PFLU_RS09475	0.59	-2.0
2,097,364	+		PFLU_RS09475	0.59	+0.8
2,097,364	+		PFLU_RS09475	0.59	-1.1
2,097,365	-		PFLU_RS09475	0.59	-3.2
2,097,365	-		PFLU_RS09475	0.59	-0.0
2,097,365	-		PFLU_RS09475	0.59	+0.8
2,097,365	-		PFLU_RS09475	0.59	-0.2
2,097,425	+		PFLU_RS09475	0.63	-0.8