Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26705

Experiment: NAG (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C); with MOPS
5,964,787	-		PFLU_RS26695	0.70	-0.1
5,964,806	+		PFLU_RS26695	0.74	+0.3
5,964,806	+		PFLU_RS26695	0.74	-1.2
5,964,807	-		PFLU_RS26695	0.74	-1.0
5,964,807	-		PFLU_RS26695	0.74	-3.2
5,964,807	-		PFLU_RS26695	0.74	-1.5
5,964,807	-		PFLU_RS26695	0.74	-0.7
5,964,807	-		PFLU_RS26695	0.74	-0.3
5,964,882	+		PFLU_RS26695	0.86	+0.4
5,964,934	+				-0.5
5,964,961	+				+0.6
5,964,962	-				+0.6
5,964,962	-				-1.3
5,964,962	-				+0.1
5,964,962	-				+0.0
5,965,173	+		PFLU_RS26700	0.26	-0.0
5,965,173	+		PFLU_RS26700	0.26	-2.1
5,965,173	+		PFLU_RS26700	0.26	+0.4
5,965,173	+		PFLU_RS26700	0.26	+1.1
5,965,174	-		PFLU_RS26700	0.27	-1.1
5,965,174	-		PFLU_RS26700	0.27	-2.5
5,965,174	-		PFLU_RS26700	0.27	+1.3
5,965,174	-		PFLU_RS26700	0.27	-0.5
5,965,174	-		PFLU_RS26700	0.27	-0.3
5,965,291	+		PFLU_RS26700	0.43	+1.6
5,965,292	-		PFLU_RS26700	0.43	+1.2
5,965,336	+		PFLU_RS26700	0.49	-0.1
5,965,337	-		PFLU_RS26700	0.49	-1.6
5,965,387	+		PFLU_RS26700	0.56	+0.9
5,965,388	-		PFLU_RS26700	0.56	-1.8
5,965,390	+		PFLU_RS26700	0.57	-1.8
5,965,390	+		PFLU_RS26700	0.57	-0.5
5,965,391	-		PFLU_RS26700	0.57	+1.4
5,965,434	+		PFLU_RS26700	0.63	-1.3
5,965,512	+		PFLU_RS26700	0.74	+0.1
5,965,512	+		PFLU_RS26700	0.74	-2.2
5,965,512	+		PFLU_RS26700	0.74	+0.5
5,965,512	+		PFLU_RS26700	0.74	+0.8
5,965,513	-		PFLU_RS26700	0.74	-1.4
5,965,513	-		PFLU_RS26700	0.74	-1.1
5,965,513	-		PFLU_RS26700	0.74	+0.4
5,965,610	+		PFLU_RS26700	0.87	-1.1
5,965,620	+		PFLU_RS26700	0.89	-0.5
5,965,823	+		PFLU_RS26705	0.36	-1.5
5,965,823	+		PFLU_RS26705	0.36	+0.4
5,965,823	+		PFLU_RS26705	0.36	+0.3
5,965,823	+		PFLU_RS26705	0.36	-1.5
5,965,823	+		PFLU_RS26705	0.36	-1.2
5,965,823	+		PFLU_RS26705	0.36	-0.2
5,965,824	-		PFLU_RS26705	0.36	-2.6
5,965,824	-		PFLU_RS26705	0.36	-1.7
5,965,824	-		PFLU_RS26705	0.36	+0.5
5,965,824	-		PFLU_RS26705	0.36	+0.0
5,965,824	-		PFLU_RS26705	0.36	-0.6
5,965,824	-		PFLU_RS26705	0.36	-0.8
5,965,824	-		PFLU_RS26705	0.36	+0.5
5,965,824	-		PFLU_RS26705	0.36	+0.9
5,965,824	-		PFLU_RS26705	0.36	-0.3
5,965,824	-		PFLU_RS26705	0.36	+0.3
5,965,868	+		PFLU_RS26705	0.49	-0.6
5,966,041	+				-3.2
5,966,041	+				-0.2
5,966,041	+				-0.1
5,966,041	+				+0.8
5,966,042	-				+0.6
5,966,042	-				+1.0
5,966,042	-				-1.6
5,966,042	-				+0.7
5,966,042	-				+1.1
5,966,042	-				-1.1
5,966,080	+				+0.7
5,966,080	+				+0.3
5,966,080	+				+0.3
5,966,080	+				+0.6
5,966,080	+				+0.3
5,966,080	+				+0.4
5,966,081	-				+0.1
5,966,081	-				-1.1
5,966,081	-				+0.8
5,966,081	-				-0.2
5,966,081	-				-2.1
5,966,081	-				-0.4
5,966,081	-				+0.2
5,966,082	+				+2.1
5,966,082	+				-1.1
5,966,082	+				-2.1
5,966,082	+				+1.0
5,966,082	+				-0.9
5,966,082	+				+0.3
5,966,082	+				-0.3
5,966,082	+				-0.0
5,966,082	+				-0.6
5,966,082	+				-0.9
5,966,082	+				+1.2
5,966,082	+				-1.0
5,966,082	+				-0.0
5,966,082	+				-0.8
5,966,082	+				+0.4
5,966,082	+				+1.7
5,966,082	+				-0.7
5,966,082	+				+0.5
5,966,082	+				+0.1
5,966,082	+				+0.5
5,966,083	-				+2.3
5,966,083	-				-0.4
5,966,083	-				-2.4
5,966,083	-				-0.0
5,966,083	-				-0.0
5,966,083	-				+0.4
5,966,083	-				+0.5
5,966,083	-				-1.0
5,966,083	-				-1.9
5,966,083	-				+1.0
5,966,083	-				-1.1
5,966,083	-				+1.3
5,966,083	-				+0.7
5,966,083	-				+3.7
5,966,083	-				-2.7
5,966,083	-				+1.8
5,966,083	-				+0.3
5,966,083	-				-0.5
5,966,083	-				+0.1
5,966,083	-				+0.1
5,966,083	-				+0.9
5,966,083	-				-2.1
5,966,083	-				+0.4
5,966,083	-				+0.8
5,966,083	-				+0.2
5,966,083	-				-1.4
5,966,098	-				-1.1
5,966,157	+				+0.5
5,966,157	+				+0.5
5,966,157	+				+0.5
5,966,157	+				+0.2
5,966,157	+				+0.3
5,966,157	+				+0.2
5,966,157	+				-0.1
5,966,157	+				+1.1
5,966,157	+				+1.7
5,966,157	+				-1.2
5,966,158	-				+1.0
5,966,158	-				-1.0
5,966,158	-				+0.7
5,966,158	-				+2.8
5,966,158	-				-0.2
5,966,158	-				-0.9
5,966,158	-				-0.5
5,966,158	-				-0.1
5,966,158	-				+0.9
5,966,158	-				+1.4
5,966,158	-				+0.8
5,966,158	-				+0.4
5,966,158	-				-0.5
5,966,158	-				-1.9
5,966,158	-				-0.2
5,966,173	-				-1.4
5,966,180	-				+0.3
5,966,180	-				-3.1
5,966,232	+				+0.5
5,966,232	+				+0.9
5,966,232	+				-0.9
5,966,232	+				-0.3
5,966,232	+				-2.0
5,966,232	+				-0.1
5,966,232	+				-2.3
5,966,232	+				+1.3
5,966,232	+				-1.2
5,966,232	+				-0.2
5,966,232	+				+0.6
5,966,233	-				+0.5
5,966,233	-				-0.4
5,966,233	-				+1.4
5,966,233	-				+0.5
5,966,233	-				+0.9
5,966,233	-				-2.0
5,966,236	+				+1.0
5,966,236	+				-1.3
5,966,236	+				-2.0
5,966,236	+				-0.1
5,966,236	+				+0.7
5,966,236	+				-1.3
5,966,236	+				+0.6
5,966,237	-				-1.2
5,966,237	-				+0.1
5,966,237	-				+0.7
5,966,237	-				+0.2
5,966,237	-				-0.1
5,966,259	+				-0.7
5,966,259	+				+0.1
5,966,259	+				+1.3
5,966,259	+				+0.9
5,966,259	+				+0.5
5,966,259	+				+1.2
5,966,259	+				+0.9
5,966,259	+				-2.6
5,966,259	+				+2.1
5,966,259	+				-1.8
5,966,259	+				+0.2
5,966,260	-				-1.0
5,966,260	-				-1.4
5,966,260	-				+0.2
5,966,260	-				-0.5
5,966,260	-				+0.4
5,966,260	-				-0.3
5,966,260	-				+2.4
5,966,490	+		PFLU_RS26710	0.58	-0.9
5,966,490	+		PFLU_RS26710	0.58	-0.0
5,966,490	+		PFLU_RS26710	0.58	-2.0
5,966,490	+		PFLU_RS26710	0.58	-0.7
5,966,490	+		PFLU_RS26710	0.58	+1.0
5,966,490	+		PFLU_RS26710	0.58	+1.4
5,966,490	+		PFLU_RS26710	0.58	+0.6
5,966,490	+		PFLU_RS26710	0.58	+1.6
5,966,491	-		PFLU_RS26710	0.58	-0.9
5,966,491	-		PFLU_RS26710	0.58	-0.9
5,966,491	-		PFLU_RS26710	0.58	+0.6
5,966,491	-		PFLU_RS26710	0.58	+1.2
5,966,646	+				+0.6
5,966,646	+				-1.5
5,966,646	+				-0.2
5,966,646	+				+2.2
5,966,646	+				+2.0
5,966,646	+				-0.1
5,966,646	+				+1.1
5,966,646	+				+0.4
5,966,646	+				-1.2
5,966,647	-				-0.5
5,966,647	-				+0.3
5,966,647	-				-1.5
5,966,647	-				+0.5
5,966,647	-				-0.5
5,966,647	-				+1.0
5,966,647	-				+0.6
5,966,647	-				+0.9
5,966,647	-				-0.7
5,966,647	-				+0.9
5,966,647	-				+0.4
5,966,647	-				+1.8
5,966,679	+				+0.4
5,966,679	+				+0.3
5,966,679	+				+0.4
5,966,679	+				-0.4
5,966,679	+				+0.9
5,966,680	-				-0.4
5,966,680	-				-1.1
5,966,680	-				-0.3
5,966,702	+				+0.7
5,966,703	-				+1.0
5,966,703	-				-1.7
5,966,703	-				+0.7
5,966,720	+				-1.5
5,966,720	+				+0.3
5,966,720	+				+0.6
5,966,720	+				+1.1
5,966,720	+				+0.4
5,966,720	+				+1.9
5,966,720	+				-0.1
5,966,720	-				-0.5
5,966,721	-				+0.1
5,966,721	-				-0.8
5,966,721	-				+0.2
5,966,721	-				+0.1
5,966,721	-				+0.3
5,966,721	-				-0.5
5,966,721	-				+0.7
5,966,721	-				+0.9
5,966,721	-				-0.9
5,966,721	-				-0.4
5,966,721	-				-0.4
5,966,724	+				+0.7
5,966,724	+				+0.4
5,966,724	+				-0.1
5,966,725	-				-0.2
5,966,730	+				-1.4
5,966,731	-				+0.2
5,966,731	-				-1.1
5,966,731	-				-1.3
5,966,734	+				-1.0
5,966,734	+				+0.7
5,966,734	+				+0.4
5,966,734	+				+1.3
5,966,734	+				-0.2
5,966,734	+				+0.1
5,966,734	+				+1.3
5,966,734	+				+1.3
5,966,734	+				-0.2
5,966,734	+				+0.4
5,966,734	+				-0.1
5,966,734	+				+0.4
5,966,734	+				+1.0
5,966,734	+				-0.7
5,966,734	+				+0.1
5,966,734	+				+0.3
5,966,734	+				+0.7
5,966,734	+				+0.3
5,966,734	+				-1.1
5,966,734	+				+1.3
5,966,734	+				+0.7
5,966,734	+				-1.1
5,966,734	+				+0.3
5,966,734	+				+1.3
5,966,734	+				-1.8
5,966,734	+				-0.5
5,966,734	+				+0.0
5,966,734	+				+0.3
5,966,734	+				-0.5
5,966,734	+				-1.5
5,966,734	+				+0.3
5,966,734	+				+1.6
5,966,734	+				+1.1
5,966,734	+				-2.1
5,966,734	+				+0.1
5,966,734	+				+0.5
5,966,734	+				-0.3
5,966,734	+				-0.7
5,966,734	+				-0.4
5,966,735	-				-0.1
5,966,735	-				-0.0
5,966,735	-				-0.8
5,966,735	-				+0.4
5,966,735	-				+2.2
5,966,735	-				-0.7
5,966,735	-				+0.4
5,966,735	-				+2.1
5,966,735	-				+0.2
5,966,735	-				-1.8
5,966,735	-				+0.5
5,966,735	-				+0.0
5,966,735	-				-0.2
5,966,735	-				+0.2
5,966,735	-				-1.4
5,966,735	-				-0.3
5,966,735	-				-0.5
5,966,735	-				+0.5
5,966,735	-				-0.6
5,966,735	-				-0.3
5,966,735	-				-0.2
5,966,735	-				-0.7
5,966,735	-				+1.6
5,966,735	-				+1.1
5,966,735	-				-0.6
5,966,735	-				-0.2
5,966,735	-				-1.1
5,966,735	-				-1.3
5,966,735	-				+0.1
5,966,735	-				+0.8
5,966,735	-				+0.1
5,966,735	-				+1.9
5,966,735	-				+0.2
5,966,735	-				+0.9
5,966,738	+				-1.8
5,966,738	+				+0.2
5,966,738	+				+0.5
5,966,738	+				-0.4
5,966,738	+				+0.1
5,966,738	+				-0.3
5,966,738	+				-0.6
5,966,738	+				-0.8
5,966,738	+				+0.5
5,966,738	+				+1.0
5,966,738	+				+0.5
5,966,739	-				-2.3
5,966,739	-				+1.2
5,966,739	-				-0.9
5,966,739	-				-1.2
5,966,771	+				-0.7
5,966,772	-				-2.6
5,966,888	+				-2.0
5,966,940	-				-1.6
5,966,957	+				-0.7
5,966,958	-		PFLU_RS26715	0.10	-2.7
5,967,026	+		PFLU_RS26715	0.14	-1.4
5,967,026	+		PFLU_RS26715	0.14	+0.9
5,967,026	+		PFLU_RS26715	0.14	-1.3
5,967,026	+		PFLU_RS26715	0.14	-1.8
5,967,026	+		PFLU_RS26715	0.14	-2.3
5,967,026	+		PFLU_RS26715	0.14	+0.3
5,967,027	-		PFLU_RS26715	0.14	+0.1
5,967,027	-		PFLU_RS26715	0.14	-2.1
5,967,027	-		PFLU_RS26715	0.14	+1.0