Experiment: D-Glucosamine Hydrochloride (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00485 and PS417_00490 are separated by 1 nucleotides PS417_00490 and PS417_00495 overlap by 4 nucleotides PS417_00495 and PS417_00500 are separated by 54 nucleotides
PS417_00485: PS417_00485 - ABC transporter permease, at 96,047 to 96,985
_00485
PS417_00490: PS417_00490 - iron ABC transporter ATP-binding protein, at 96,987 to 97,790
_00490
PS417_00495: PS417_00495 - ABC transporter permease, at 97,787 to 98,935
_00495
PS417_00500: PS417_00500 - membrane protein, at 98,990 to 100,021
_00500
Position (kb) 97
98
99 Strain fitness (log2 ratio) -2
-1
0
1
2 at 96.867 kb on + strand, within PS417_00485 at 96.990 kb on + strand at 96.991 kb on - strand at 96.991 kb on - strand at 96.991 kb on - strand at 96.999 kb on + strand at 97.150 kb on + strand, within PS417_00490 at 97.151 kb on - strand, within PS417_00490 at 97.354 kb on + strand, within PS417_00490 at 97.355 kb on - strand, within PS417_00490 at 97.623 kb on - strand, within PS417_00490 at 97.684 kb on + strand, within PS417_00490 at 97.685 kb on - strand, within PS417_00490 at 97.685 kb on - strand, within PS417_00490 at 97.685 kb on - strand, within PS417_00490 at 97.685 kb on - strand, within PS417_00490 at 97.779 kb on + strand at 97.780 kb on - strand at 98.045 kb on + strand, within PS417_00495 at 98.142 kb on - strand, within PS417_00495 at 98.397 kb on - strand, within PS417_00495 at 98.766 kb on - strand, within PS417_00495 at 98.799 kb on + strand, within PS417_00495 at 98.800 kb on - strand, within PS417_00495 at 98.800 kb on - strand, within PS417_00495 at 98.867 kb on - strand at 98.936 kb on - strand at 98.969 kb on + strand at 98.969 kb on + strand at 98.973 kb on + strand at 98.973 kb on + strand at 98.974 kb on - strand at 98.974 kb on - strand at 98.974 kb on - strand at 98.976 kb on + strand at 98.977 kb on - strand at 98.991 kb on + strand at 98.992 kb on - strand at 98.992 kb on - strand at 99.158 kb on - strand, within PS417_00500 at 99.208 kb on - strand, within PS417_00500 at 99.208 kb on - strand, within PS417_00500 at 99.517 kb on - strand, within PS417_00500 at 99.517 kb on - strand, within PS417_00500 at 99.517 kb on - strand, within PS417_00500 at 99.631 kb on - strand, within PS417_00500 at 99.634 kb on - strand, within PS417_00500
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C) remove 96,867 + PS417_00485 0.87 -0.6 96,990 + -0.3 96,991 - -0.1 96,991 - +0.2 96,991 - -0.1 96,999 + -0.8 97,150 + PS417_00490 0.20 +0.8 97,151 - PS417_00490 0.20 -0.9 97,354 + PS417_00490 0.46 -0.4 97,355 - PS417_00490 0.46 -0.3 97,623 - PS417_00490 0.79 -0.8 97,684 + PS417_00490 0.87 -0.0 97,685 - PS417_00490 0.87 +0.5 97,685 - PS417_00490 0.87 +0.7 97,685 - PS417_00490 0.87 +0.8 97,685 - PS417_00490 0.87 -0.5 97,779 + -0.9 97,780 - -0.8 98,045 + PS417_00495 0.22 -0.2 98,142 - PS417_00495 0.31 -1.0 98,397 - PS417_00495 0.53 -0.3 98,766 - PS417_00495 0.85 -1.2 98,799 + PS417_00495 0.88 -0.0 98,800 - PS417_00495 0.88 +0.1 98,800 - PS417_00495 0.88 -0.7 98,867 - +0.3 98,936 - -0.3 98,969 + -0.6 98,969 + -0.2 98,973 + -0.2 98,973 + +2.2 98,974 - -0.1 98,974 - +0.8 98,974 - -0.3 98,976 + -1.8 98,977 - +1.2 98,991 + +0.4 98,992 - +0.3 98,992 - +0.1 99,158 - PS417_00500 0.16 -0.1 99,208 - PS417_00500 0.21 +0.0 99,208 - PS417_00500 0.21 +0.0 99,517 - PS417_00500 0.51 -0.2 99,517 - PS417_00500 0.51 +0.1 99,517 - PS417_00500 0.51 -0.1 99,631 - PS417_00500 0.62 -0.1 99,634 - PS417_00500 0.62 -0.5
Or see this region's nucleotide sequence