Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2929

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,505,915	-		Echvi_2928	0.20	+1.0
3,505,929	+		Echvi_2928	0.23	-3.3
3,505,929	+		Echvi_2928	0.23	-2.9
3,505,929	+		Echvi_2928	0.23	-2.4
3,505,930	-		Echvi_2928	0.23	+0.6
3,505,930	-		Echvi_2928	0.23	+0.9
3,505,930	-		Echvi_2928	0.23	+2.5
3,505,930	-		Echvi_2928	0.23	+0.4
3,505,930	-		Echvi_2928	0.23	+1.0
3,505,931	+		Echvi_2928	0.24	-3.0
3,505,931	+		Echvi_2928	0.24	-1.1
3,505,932	-		Echvi_2928	0.24	+0.7
3,505,932	-		Echvi_2928	0.24	+0.6
3,505,932	-		Echvi_2928	0.24	+1.7
3,505,973	-		Echvi_2928	0.33	+1.3
3,505,973	-		Echvi_2928	0.33	+1.2
3,505,982	-		Echvi_2928	0.35	+0.5
3,506,078	-		Echvi_2928	0.56	+0.8
3,506,085	-		Echvi_2928	0.58	-0.1
3,506,085	-		Echvi_2928	0.58	+0.5
3,506,109	-		Echvi_2928	0.63	+1.1
3,506,120	-		Echvi_2928	0.66	+1.4
3,506,165	+		Echvi_2928	0.76	-1.5
3,506,194	-		Echvi_2928	0.82	+0.7
3,506,209	+		Echvi_2928	0.85	-0.3
3,506,288	-				-0.6
3,506,370	+				-0.1
3,506,380	-				-0.0
3,506,392	+				-1.8
3,506,471	-				+0.9
3,506,542	+		Echvi_2929	0.11	-1.1
3,506,542	+		Echvi_2929	0.11	-1.6
3,506,578	-		Echvi_2929	0.13	+0.4
3,506,602	+		Echvi_2929	0.14	-0.4
3,506,676	-		Echvi_2929	0.18	+0.7
3,506,727	-		Echvi_2929	0.21	+1.5
3,506,769	-		Echvi_2929	0.23	+1.4
3,506,813	+		Echvi_2929	0.26	+0.2
3,506,814	-		Echvi_2929	0.26	+1.7
3,506,849	-		Echvi_2929	0.28	+1.2
3,506,880	+		Echvi_2929	0.29	-1.1
3,506,880	+		Echvi_2929	0.29	-0.3
3,506,880	+		Echvi_2929	0.29	+0.5
3,506,880	+		Echvi_2929	0.29	-0.3
3,506,881	-		Echvi_2929	0.29	+0.8
3,506,883	-		Echvi_2929	0.29	-1.1
3,506,892	+		Echvi_2929	0.30	-1.0
3,506,893	-		Echvi_2929	0.30	+1.0
3,506,900	+		Echvi_2929	0.30	+0.8
3,506,900	+		Echvi_2929	0.30	-0.7
3,506,900	+		Echvi_2929	0.30	+0.9
3,506,901	-		Echvi_2929	0.30	+1.3
3,506,959	-		Echvi_2929	0.34	+0.7
3,506,997	+		Echvi_2929	0.36	-1.0
3,506,997	+		Echvi_2929	0.36	-0.0
3,506,998	-		Echvi_2929	0.36	-0.3
3,506,999	+		Echvi_2929	0.36	+0.3
3,506,999	+		Echvi_2929	0.36	-1.2
3,507,000	-		Echvi_2929	0.36	-0.5
3,507,000	-		Echvi_2929	0.36	+0.5
3,507,048	+		Echvi_2929	0.38	-0.6
3,507,048	+		Echvi_2929	0.38	-0.2
3,507,059	+		Echvi_2929	0.39	-1.2
3,507,060	-		Echvi_2929	0.39	+1.2
3,507,122	+		Echvi_2929	0.42	-0.9
3,507,123	-		Echvi_2929	0.42	+0.3
3,507,123	-		Echvi_2929	0.42	+0.4
3,507,128	-		Echvi_2929	0.43	+0.8
3,507,147	+		Echvi_2929	0.44	+0.9
3,507,147	+		Echvi_2929	0.44	+0.5
3,507,149	+		Echvi_2929	0.44	+1.1
3,507,149	+		Echvi_2929	0.44	-0.1
3,507,149	+		Echvi_2929	0.44	+0.5
3,507,150	-		Echvi_2929	0.44	+1.5
3,507,238	-		Echvi_2929	0.49	+0.6
3,507,299	+		Echvi_2929	0.52	+0.9
3,507,315	+		Echvi_2929	0.53	+1.7
3,507,316	-		Echvi_2929	0.53	+0.9
3,507,317	+		Echvi_2929	0.53	-0.4
3,507,318	-		Echvi_2929	0.53	+0.7
3,507,339	+		Echvi_2929	0.54	-0.8
3,507,368	-		Echvi_2929	0.56	+1.3
3,507,380	-		Echvi_2929	0.56	+1.0
3,507,435	-		Echvi_2929	0.59	+1.2
3,507,467	+		Echvi_2929	0.61	-0.8
3,507,467	+		Echvi_2929	0.61	+0.7
3,507,467	+		Echvi_2929	0.61	-0.5
3,507,467	+		Echvi_2929	0.61	+0.1
3,507,468	-		Echvi_2929	0.61	+1.5
3,507,468	-		Echvi_2929	0.61	+1.0
3,507,508	+		Echvi_2929	0.63	+0.0
3,507,509	-		Echvi_2929	0.63	+2.6
3,507,509	-		Echvi_2929	0.63	+1.9
3,507,541	+		Echvi_2929	0.65	-0.6
3,507,542	-		Echvi_2929	0.65	+0.1
3,507,615	+		Echvi_2929	0.69	+0.4
3,507,615	+		Echvi_2929	0.69	+0.7
3,507,616	-		Echvi_2929	0.69	-0.1
3,507,624	+		Echvi_2929	0.70	-0.1
3,507,625	-		Echvi_2929	0.70	+2.0
3,507,664	+		Echvi_2929	0.72	-0.4
3,507,664	+		Echvi_2929	0.72	-1.0
3,507,767	+		Echvi_2929	0.77	+0.7
3,507,863	+		Echvi_2929	0.83	-0.7
3,507,863	+		Echvi_2929	0.83	+0.1
3,507,864	-		Echvi_2929	0.83	-0.1
3,507,864	-		Echvi_2929	0.83	+0.5
3,507,864	-		Echvi_2929	0.83	+0.9
3,507,864	-		Echvi_2929	0.83	+0.4
3,507,864	-		Echvi_2929	0.83	+0.9
3,507,864	-		Echvi_2929	0.83	+0.6
3,507,868	-		Echvi_2929	0.83	+1.7
3,507,892	+		Echvi_2929	0.84	+0.9
3,507,902	+		Echvi_2929	0.85	-0.4
3,507,902	+		Echvi_2929	0.85	+1.2
3,507,902	+		Echvi_2929	0.85	-0.8
3,507,902	+		Echvi_2929	0.85	-0.5
3,507,902	+		Echvi_2929	0.85	-0.7
3,507,903	-		Echvi_2929	0.85	-0.3
3,507,903	-		Echvi_2929	0.85	+1.1
3,507,903	-		Echvi_2929	0.85	+1.8
3,507,904	+		Echvi_2929	0.85	-0.9
3,507,904	+		Echvi_2929	0.85	+0.1
3,507,904	+		Echvi_2929	0.85	+0.5
3,507,904	+		Echvi_2929	0.85	+0.5
3,507,905	-		Echvi_2929	0.85	+0.2
3,507,905	-		Echvi_2929	0.85	+0.9
3,507,935	+		Echvi_2929	0.87	-1.9
3,507,950	+		Echvi_2929	0.87	-0.4
3,507,983	+		Echvi_2929	0.89	-0.4
3,508,001	+				-1.1
3,508,048	-				+0.2
3,508,091	+				+0.7
3,508,092	-				+0.4
3,508,125	-				+0.2
3,508,127	+				-2.1
3,508,150	+				-0.7
3,508,150	+				+0.4
3,508,151	-				+1.4
3,508,202	-				+0.8
3,508,298	+		Echvi_2930	0.17	-0.8
3,508,336	-		Echvi_2930	0.23	+0.2
3,508,549	+		Echvi_2930	0.58	-0.7
3,508,680	+		Echvi_2930	0.79	-0.3
3,508,815	+				-0.2
3,508,886	-				+0.2
3,508,888	+				-0.9
3,508,896	-				+1.3
3,508,897	+				+0.0
3,508,897	+				-0.1
3,508,923	+				-0.0
3,508,924	-				+0.6
3,508,931	+				+0.7
3,508,940	-				+0.3
3,508,968	+				+0.3
3,508,970	+				-0.5
3,508,970	+				+1.9
3,508,970	+				+1.1
3,508,971	-				-0.9
3,508,971	-				+0.3
3,508,971	-				-0.3
3,508,971	-				+0.3
3,508,971	-				+0.2
3,509,044	-		Echvi_2931	0.10	-1.0
3,509,068	+		Echvi_2931	0.13	+0.1
3,509,069	-		Echvi_2931	0.13	-1.0
3,509,069	-		Echvi_2931	0.13	-0.6
3,509,112	+		Echvi_2931	0.18	-1.5
3,509,112	+		Echvi_2931	0.18	+0.4
3,509,112	+		Echvi_2931	0.18	+0.5
3,509,113	-		Echvi_2931	0.18	+0.1
3,509,113	-		Echvi_2931	0.18	+1.3
3,509,133	+		Echvi_2931	0.21	+0.7
3,509,133	+		Echvi_2931	0.21	-0.1
3,509,167	+		Echvi_2931	0.24	-0.4
3,509,168	-		Echvi_2931	0.25	-0.0
3,509,168	-		Echvi_2931	0.25	+0.7