Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1024

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,185,774	-				+0.4
1,185,774	-				+0.1
1,185,774	-				-0.1
1,185,781	-				+0.3
1,185,786	-				+0.1
1,185,786	-				+1.3
1,185,786	-				+1.7
1,185,786	-				+0.1
1,185,790	-				+0.0
1,185,807	+				-0.9
1,185,807	+				-1.4
1,185,808	-				-0.8
1,185,808	-				-1.6
1,185,808	-				+1.1
1,185,842	+				-0.1
1,185,861	+				+1.0
1,185,866	-				+1.3
1,185,933	-				-0.7
1,185,957	+				-0.3
1,186,024	+				-0.3
1,186,032	+				+0.8
1,186,064	+				-0.6
1,186,065	-				+0.4
1,186,065	-				+0.8
1,186,066	+				+0.4
1,186,066	+				+0.2
1,186,066	+				-0.5
1,186,066	+				-0.6
1,186,066	+				-0.6
1,186,066	+				+0.1
1,186,067	-				-1.3
1,186,067	-				+0.4
1,186,067	-				-0.1
1,186,067	-				+0.6
1,186,077	-				+0.7
1,186,083	+				+0.3
1,186,084	-				+1.0
1,186,088	+				+0.8
1,186,088	+				-0.6
1,186,088	+				+0.0
1,186,088	+				+1.4
1,186,088	+				-0.8
1,186,088	+				-0.0
1,186,088	+				-0.0
1,186,088	+				-0.1
1,186,088	+				-0.1
1,186,089	-				+1.0
1,186,089	-				-0.0
1,186,089	-				+0.3
1,186,089	-				-0.9
1,186,089	-				+1.2
1,186,089	-				+1.3
1,186,089	-				-0.8
1,186,089	-				+0.3
1,186,089	-				+0.3
1,186,089	-				-0.8
1,186,090	+				-0.3
1,186,090	+				-0.6
1,186,090	+				-1.2
1,186,090	+				-0.4
1,186,090	+				-1.3
1,186,091	-				-0.0
1,186,091	-				+0.4
1,186,091	-				+0.5
1,186,097	+				-1.2
1,186,097	+				+0.4
1,186,117	+				-0.0
1,186,118	-				-0.2
1,186,118	-				-0.1
1,186,122	+				-0.5
1,186,123	-				+0.2
1,186,123	-				-1.4
1,186,129	+				-1.3
1,186,129	+				-0.6
1,186,129	+				+1.1
1,186,129	+				+1.5
1,186,130	-				+0.7
1,186,130	-				+1.0
1,186,164	+				+0.7
1,186,164	+				-0.8
1,186,164	+				-0.4
1,186,165	-				-0.3
1,186,175	+				+2.3
1,186,175	+				+1.6
1,186,175	+				-0.1
1,186,176	-				-0.3
1,186,176	-				+1.0
1,186,191	+				-0.8
1,186,238	+				+0.2
1,186,248	+				-0.4
1,186,248	+				+1.1
1,186,249	-				-0.4
1,186,249	-				+1.6
1,186,322	+				-0.1
1,186,323	-				+0.8
1,186,323	-				+0.0
1,186,327	-				+0.6
1,186,327	-				+1.4
1,186,327	-				-0.3
1,186,350	+				-1.1
1,186,350	+				+0.8
1,186,417	-				-1.2
1,186,417	-				+2.0
1,186,452	+				+0.4
1,186,452	+				-0.7
1,186,453	-				-0.6
1,186,470	+				-0.0
1,186,470	+				+0.4
1,186,479	+				-0.4
1,186,479	+				-0.2
1,186,480	-				+0.4
1,186,480	-				-0.2
1,186,520	+		Echvi_1023	0.16	-0.5
1,186,520	+		Echvi_1023	0.16	-0.3
1,186,521	-		Echvi_1023	0.17	-1.5
1,186,578	+		Echvi_1023	0.78	-1.0
1,186,596	-				+0.2
1,186,607	-				+0.2
1,186,610	+				-0.6
1,186,620	+				-0.4
1,186,620	+				-0.7
1,186,620	+				+0.5
1,186,620	+				+0.1
1,186,620	+				-0.3
1,186,621	-				+0.3
1,186,621	-				+1.0
1,186,621	-				-2.0
1,186,630	+				-0.5
1,186,638	+				+1.1
1,186,638	+				-0.3
1,186,685	+				+0.7
1,186,686	-				-0.1
1,186,698	-				+1.6
1,186,707	-				-0.9
1,186,857	+		Echvi_1024	0.14	+0.7
1,186,857	+		Echvi_1024	0.14	+0.7
1,186,862	+		Echvi_1024	0.15	+0.3
1,186,863	-		Echvi_1024	0.15	+0.9
1,186,897	-		Echvi_1024	0.20	+0.3
1,186,933	-		Echvi_1024	0.26	-0.6
1,186,933	-				+1.0
1,186,959	+		Echvi_1024	0.29	-0.5
1,186,960	-		Echvi_1024	0.30	+0.1
1,186,965	+		Echvi_1024	0.30	+0.4
1,186,967	+		Echvi_1024	0.31	-0.6
1,186,967	+		Echvi_1024	0.31	-0.6
1,186,967	+		Echvi_1024	0.31	+1.0
1,186,967	+		Echvi_1024	0.31	+0.7
1,186,967	+		Echvi_1024	0.31	+0.7
1,186,971	+		Echvi_1024	0.31	-0.1
1,186,972	-		Echvi_1024	0.31	-0.0
1,186,972	-		Echvi_1024	0.31	+0.2
1,187,007	+		Echvi_1024	0.37	+0.1
1,187,036	+		Echvi_1024	0.41	+0.8
1,187,036	+		Echvi_1024	0.41	+0.8
1,187,036	+		Echvi_1024	0.41	+1.2
1,187,057	+		Echvi_1024	0.44	+0.1
1,187,069	+		Echvi_1024	0.46	-1.2
1,187,106	+		Echvi_1024	0.51	-0.0
1,187,121	+		Echvi_1024	0.53	-1.1
1,187,122	-		Echvi_1024	0.54	+0.5
1,187,177	+		Echvi_1024	0.62	-0.4
1,187,226	+		Echvi_1024	0.69	+0.7
1,187,357	+		Echvi_1024	0.88	-0.0
1,187,446	+				+1.0
1,187,447	-				+2.0
1,187,516	+				-1.5
1,187,533	+				+0.4
1,187,533	+				+1.0
1,187,612	+		Echvi_1025	0.12	+0.3
1,187,612	+		Echvi_1025	0.12	+0.1
1,187,612	+		Echvi_1025	0.12	-1.3
1,187,613	-		Echvi_1025	0.12	+0.1
1,187,613	-		Echvi_1025	0.12	+0.6
1,187,613	-		Echvi_1025	0.12	-0.3
1,187,619	+		Echvi_1025	0.14	-0.8
1,187,619	+		Echvi_1025	0.14	-0.4
1,187,619	+		Echvi_1025	0.14	+0.2
1,187,619	+		Echvi_1025	0.14	-0.1
1,187,620	-		Echvi_1025	0.14	-0.3
1,187,620	-		Echvi_1025	0.14	-2.0
1,187,620	-		Echvi_1025	0.14	-0.6
1,187,663	+		Echvi_1025	0.22	-0.4
1,187,663	+		Echvi_1025	0.22	-0.6
1,187,663	+		Echvi_1025	0.22	-0.1
1,187,664	-		Echvi_1025	0.22	-0.3
1,187,697	+		Echvi_1025	0.28	+0.3
1,187,697	+		Echvi_1025	0.28	+0.8
1,187,801	+		Echvi_1025	0.47	+0.3
1,187,804	+		Echvi_1025	0.47	+1.5
1,187,814	+		Echvi_1025	0.49	+0.2
1,187,815	-		Echvi_1025	0.49	+1.0
1,187,888	-		Echvi_1025	0.63	+1.4
1,187,888	-		Echvi_1025	0.63	-0.1
1,187,989	+		Echvi_1025	0.81	-1.5
1,187,990	-		Echvi_1025	0.82	+1.2
1,187,992	-		Echvi_1025	0.82	-1.7
1,187,992	-		Echvi_1025	0.82	+0.4
1,187,992	-		Echvi_1025	0.82	-0.6
1,187,992	-		Echvi_1025	0.82	+0.0
1,188,031	+		Echvi_1025	0.89	-1.3
1,188,032	-		Echvi_1025	0.89	-1.5
1,188,034	-		Echvi_1025	0.90	-0.2
1,188,065	-				+0.4
1,188,090	+				+0.7
1,188,095	+				-2.8
1,188,095	+				+0.5
1,188,096	-				+0.6
1,188,145	-				-0.3
1,188,160	-				+0.1
1,188,170	+				+0.2
1,188,177	+				-0.4
1,188,178	-				+0.2
1,188,187	+				+0.4
1,188,187	+				+0.2
1,188,218	+				+0.0
1,188,218	+				-0.1
1,188,278	+				+1.0
1,188,373	+				-1.1
1,188,373	+				-0.3
1,188,374	-		Echvi_1026	0.10	-0.2
1,188,432	+		Echvi_1026	0.18	-0.6