Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03795 and ECD_03796 are separated by 148 nucleotides ECD_03796 and ECD_03797 are separated by 105 nucleotides
ECD_03795: ECD_03795 - 2-keto-3-deoxy-D-gluconate transporter, at 4,009,612 to 4,010,595
_03795
ECD_03796: ECD_03796 - 6-N-hydroxylaminopurine resistance protein, at 4,010,744 to 4,011,418
_03796
ECD_03797: ECD_03797 - sensory histidine kinase in two-component regulatory system with CpxR, at 4,011,524 to 4,012,897
_03797
Position (kb)
4010
4011
4012 Strain fitness (log2 ratio)
-1
0
1 at 4009.820 kb on + strand, within ECD_03795 at 4009.827 kb on + strand, within ECD_03795 at 4009.896 kb on + strand, within ECD_03795 at 4009.969 kb on - strand, within ECD_03795 at 4010.079 kb on + strand, within ECD_03795 at 4010.079 kb on + strand, within ECD_03795 at 4010.135 kb on + strand, within ECD_03795 at 4010.139 kb on - strand, within ECD_03795 at 4010.247 kb on + strand, within ECD_03795 at 4010.310 kb on - strand, within ECD_03795 at 4010.313 kb on + strand, within ECD_03795 at 4010.313 kb on + strand, within ECD_03795 at 4010.533 kb on - strand at 4010.544 kb on + strand at 4010.544 kb on + strand at 4010.545 kb on - strand at 4010.545 kb on - strand at 4010.629 kb on + strand at 4010.667 kb on + strand at 4010.668 kb on - strand at 4010.672 kb on - strand at 4010.697 kb on - strand at 4010.701 kb on + strand at 4010.763 kb on + strand at 4010.763 kb on + strand at 4010.764 kb on - strand at 4010.764 kb on - strand at 4010.764 kb on - strand at 4010.764 kb on - strand at 4010.764 kb on - strand at 4010.765 kb on + strand at 4010.765 kb on + strand at 4010.765 kb on + strand at 4010.765 kb on + strand at 4010.766 kb on - strand at 4010.816 kb on - strand, within ECD_03796 at 4010.937 kb on - strand, within ECD_03796 at 4010.937 kb on - strand, within ECD_03796 at 4010.937 kb on - strand, within ECD_03796 at 4011.032 kb on - strand, within ECD_03796 at 4011.032 kb on - strand, within ECD_03796 at 4011.038 kb on + strand, within ECD_03796 at 4011.038 kb on + strand, within ECD_03796 at 4011.038 kb on + strand, within ECD_03796 at 4011.039 kb on - strand, within ECD_03796 at 4011.039 kb on - strand, within ECD_03796 at 4011.039 kb on - strand, within ECD_03796 at 4011.072 kb on + strand, within ECD_03796 at 4011.072 kb on + strand, within ECD_03796 at 4011.073 kb on - strand, within ECD_03796 at 4011.073 kb on - strand, within ECD_03796 at 4011.116 kb on + strand, within ECD_03796 at 4011.116 kb on + strand, within ECD_03796 at 4011.164 kb on - strand, within ECD_03796 at 4011.179 kb on + strand, within ECD_03796 at 4011.179 kb on + strand, within ECD_03796 at 4011.179 kb on + strand, within ECD_03796 at 4011.179 kb on + strand, within ECD_03796 at 4011.179 kb on + strand, within ECD_03796 at 4011.179 kb on + strand, within ECD_03796 at 4011.180 kb on - strand, within ECD_03796 at 4011.180 kb on - strand, within ECD_03796 at 4011.180 kb on - strand, within ECD_03796 at 4011.180 kb on - strand, within ECD_03796 at 4011.180 kb on - strand, within ECD_03796 at 4011.181 kb on + strand, within ECD_03796 at 4011.182 kb on - strand, within ECD_03796 at 4011.283 kb on + strand, within ECD_03796 at 4011.283 kb on + strand, within ECD_03796 at 4011.283 kb on + strand, within ECD_03796 at 4011.284 kb on - strand, within ECD_03796 at 4011.440 kb on - strand at 4011.510 kb on + strand at 4011.511 kb on - strand at 4011.526 kb on - strand at 4011.535 kb on + strand at 4011.536 kb on - strand at 4011.537 kb on + strand at 4011.687 kb on + strand, within ECD_03797 at 4011.752 kb on - strand, within ECD_03797 at 4011.761 kb on - strand, within ECD_03797 at 4011.800 kb on - strand, within ECD_03797 at 4012.010 kb on - strand, within ECD_03797 at 4012.010 kb on - strand, within ECD_03797 at 4012.325 kb on - strand, within ECD_03797
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 4,009,820 + ECD_03795 0.21 +0.2 4,009,827 + ECD_03795 0.22 +0.0 4,009,896 + ECD_03795 0.29 +0.1 4,009,969 - ECD_03795 0.36 +0.6 4,010,079 + ECD_03795 0.47 +0.1 4,010,079 + ECD_03795 0.47 +0.0 4,010,135 + ECD_03795 0.53 +0.3 4,010,139 - ECD_03795 0.54 +0.2 4,010,247 + ECD_03795 0.65 +0.4 4,010,310 - ECD_03795 0.71 +0.5 4,010,313 + ECD_03795 0.71 -0.2 4,010,313 + ECD_03795 0.71 +0.3 4,010,533 - -0.0 4,010,544 + +0.0 4,010,544 + +0.5 4,010,545 - -0.3 4,010,545 - -0.0 4,010,629 + -0.1 4,010,667 + -0.2 4,010,668 - +0.8 4,010,672 - +0.4 4,010,697 - -0.3 4,010,701 + +0.2 4,010,763 + +0.3 4,010,763 + +0.3 4,010,764 - +0.0 4,010,764 - +0.1 4,010,764 - +1.1 4,010,764 - +0.0 4,010,764 - +0.0 4,010,765 + -0.2 4,010,765 + -0.4 4,010,765 + -0.6 4,010,765 + +0.2 4,010,766 - -0.1 4,010,816 - ECD_03796 0.11 -0.2 4,010,937 - ECD_03796 0.29 +0.3 4,010,937 - ECD_03796 0.29 -0.4 4,010,937 - ECD_03796 0.29 -0.3 4,011,032 - ECD_03796 0.43 +0.6 4,011,032 - ECD_03796 0.43 +0.2 4,011,038 + ECD_03796 0.44 -0.0 4,011,038 + ECD_03796 0.44 -0.6 4,011,038 + ECD_03796 0.44 +0.0 4,011,039 - ECD_03796 0.44 -0.9 4,011,039 - ECD_03796 0.44 -0.2 4,011,039 - ECD_03796 0.44 +0.4 4,011,072 + ECD_03796 0.49 +0.5 4,011,072 + ECD_03796 0.49 +0.1 4,011,073 - ECD_03796 0.49 +0.7 4,011,073 - ECD_03796 0.49 +0.4 4,011,116 + ECD_03796 0.55 +0.1 4,011,116 + ECD_03796 0.55 +0.3 4,011,164 - ECD_03796 0.62 +0.3 4,011,179 + ECD_03796 0.64 +0.4 4,011,179 + ECD_03796 0.64 +0.1 4,011,179 + ECD_03796 0.64 +0.2 4,011,179 + ECD_03796 0.64 +0.9 4,011,179 + ECD_03796 0.64 +0.3 4,011,179 + ECD_03796 0.64 +0.4 4,011,180 - ECD_03796 0.65 +0.0 4,011,180 - ECD_03796 0.65 -0.2 4,011,180 - ECD_03796 0.65 +0.6 4,011,180 - ECD_03796 0.65 +0.3 4,011,180 - ECD_03796 0.65 -0.2 4,011,181 + ECD_03796 0.65 -0.6 4,011,182 - ECD_03796 0.65 +0.4 4,011,283 + ECD_03796 0.80 +1.5 4,011,283 + ECD_03796 0.80 +1.3 4,011,283 + ECD_03796 0.80 +0.2 4,011,284 - ECD_03796 0.80 +0.3 4,011,440 - +0.2 4,011,510 + +0.3 4,011,511 - +0.6 4,011,526 - +0.4 4,011,535 + +0.3 4,011,536 - -0.1 4,011,537 + +0.5 4,011,687 + ECD_03797 0.12 -0.1 4,011,752 - ECD_03797 0.17 +0.9 4,011,761 - ECD_03797 0.17 +0.2 4,011,800 - ECD_03797 0.20 +0.6 4,012,010 - ECD_03797 0.35 +0.4 4,012,010 - ECD_03797 0.35 -0.0 4,012,325 - ECD_03797 0.58 +0.3
Or see this region's nucleotide sequence