Strain Fitness in Escherichia coli BL21 around ECD_02700

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02699 and ECD_02700 are separated by 10 nucleotidesECD_02700 and ECD_02701 overlap by 4 nucleotidesECD_02701 and ECD_02702 are separated by 39 nucleotides ECD_02699: ECD_02699 - xanthine dehydrogenase, molybdenum binding subunit, at 2,831,207 to 2,833,465 _02699 ECD_02700: ECD_02700 - xanthine dehydrogenase, FAD-binding subunit, at 2,833,476 to 2,834,354 _02700 ECD_02701: ECD_02701 - xanthine dehydrogenase, Fe-S binding subunit, at 2,834,351 to 2,834,830 _02701 ECD_02702: ECD_02702 - putative sigma-54-interacting transcriptional activator, at 2,834,870 to 2,836,648 _02702 Position (kb) 2833 2834 2835Strain fitness (log2 ratio) -3 -2 -1 0 1at 2832.524 kb on - strand, within ECD_02699at 2832.524 kb on - strand, within ECD_02699at 2832.527 kb on + strand, within ECD_02699at 2832.528 kb on - strand, within ECD_02699at 2832.528 kb on - strand, within ECD_02699at 2832.528 kb on - strand, within ECD_02699at 2832.528 kb on - strand, within ECD_02699at 2832.536 kb on - strand, within ECD_02699at 2832.555 kb on + strand, within ECD_02699at 2832.556 kb on - strand, within ECD_02699at 2832.561 kb on + strand, within ECD_02699at 2832.561 kb on + strand, within ECD_02699at 2832.562 kb on - strand, within ECD_02699at 2832.727 kb on + strand, within ECD_02699at 2832.767 kb on + strand, within ECD_02699at 2832.767 kb on + strand, within ECD_02699at 2832.768 kb on - strand, within ECD_02699at 2832.768 kb on - strand, within ECD_02699at 2832.768 kb on - strand, within ECD_02699at 2832.768 kb on - strand, within ECD_02699at 2832.768 kb on - strand, within ECD_02699at 2832.768 kb on - strand, within ECD_02699at 2832.768 kb on - strand, within ECD_02699at 2832.804 kb on + strand, within ECD_02699at 2832.804 kb on + strand, within ECD_02699at 2832.805 kb on - strand, within ECD_02699at 2832.805 kb on - strand, within ECD_02699at 2832.807 kb on + strand, within ECD_02699at 2832.807 kb on + strand, within ECD_02699at 2832.807 kb on + strand, within ECD_02699at 2832.808 kb on - strand, within ECD_02699at 2832.808 kb on - strand, within ECD_02699at 2832.808 kb on - strand, within ECD_02699at 2832.808 kb on - strand, within ECD_02699at 2832.843 kb on + strand, within ECD_02699at 2832.843 kb on + strand, within ECD_02699at 2832.843 kb on + strand, within ECD_02699at 2832.843 kb on + strand, within ECD_02699at 2832.843 kb on + strand, within ECD_02699at 2832.844 kb on - strand, within ECD_02699at 2832.844 kb on - strand, within ECD_02699at 2832.844 kb on - strand, within ECD_02699at 2832.844 kb on - strand, within ECD_02699at 2832.873 kb on + strand, within ECD_02699at 2832.874 kb on - strand, within ECD_02699at 2832.874 kb on - strand, within ECD_02699at 2832.925 kb on - strand, within ECD_02699at 2832.925 kb on - strand, within ECD_02699at 2833.007 kb on - strand, within ECD_02699at 2833.028 kb on - strand, within ECD_02699at 2833.108 kb on + strand, within ECD_02699at 2833.108 kb on + strand, within ECD_02699at 2833.108 kb on + strand, within ECD_02699at 2833.109 kb on - strand, within ECD_02699at 2833.114 kb on + strand, within ECD_02699at 2833.140 kb on + strand, within ECD_02699at 2833.141 kb on - strand, within ECD_02699at 2833.202 kb on - strand, within ECD_02699at 2833.238 kb on + strand, within ECD_02699at 2833.239 kb on - strand, within ECD_02699at 2833.321 kb on + strandat 2833.321 kb on + strandat 2833.321 kb on + strandat 2833.321 kb on + strandat 2833.321 kb on + strandat 2833.321 kb on + strandat 2833.322 kb on - strandat 2833.322 kb on - strandat 2833.322 kb on - strandat 2833.322 kb on - strandat 2833.322 kb on - strandat 2833.322 kb on - strandat 2833.322 kb on - strandat 2833.322 kb on - strandat 2833.322 kb on - strandat 2833.322 kb on - strandat 2833.344 kb on + strandat 2833.345 kb on - strandat 2833.405 kb on + strandat 2833.405 kb on + strandat 2833.405 kb on + strandat 2833.405 kb on + strandat 2833.405 kb on + strandat 2833.405 kb on + strandat 2833.405 kb on + strandat 2833.406 kb on - strandat 2833.406 kb on - strandat 2833.406 kb on - strandat 2833.406 kb on - strandat 2833.433 kb on + strandat 2833.433 kb on + strandat 2833.433 kb on + strandat 2833.433 kb on + strandat 2833.434 kb on - strandat 2833.434 kb on - strandat 2833.434 kb on - strandat 2833.434 kb on - strandat 2833.434 kb on - strandat 2833.434 kb on - strandat 2833.434 kb on - strandat 2833.469 kb on + strandat 2833.494 kb on + strandat 2833.494 kb on + strandat 2833.494 kb on + strandat 2833.494 kb on + strandat 2833.494 kb on + strandat 2833.495 kb on - strandat 2833.495 kb on - strandat 2833.579 kb on + strand, within ECD_02700at 2833.580 kb on - strand, within ECD_02700at 2833.619 kb on + strand, within ECD_02700at 2833.620 kb on - strand, within ECD_02700at 2833.628 kb on + strand, within ECD_02700at 2833.628 kb on + strand, within ECD_02700at 2833.634 kb on + strand, within ECD_02700at 2833.634 kb on + strand, within ECD_02700at 2833.634 kb on + strand, within ECD_02700at 2833.658 kb on + strand, within ECD_02700at 2833.658 kb on + strand, within ECD_02700at 2833.706 kb on + strand, within ECD_02700at 2833.714 kb on + strand, within ECD_02700at 2833.714 kb on + strand, within ECD_02700at 2833.717 kb on + strand, within ECD_02700at 2833.718 kb on - strand, within ECD_02700at 2833.727 kb on + strand, within ECD_02700at 2833.728 kb on - strand, within ECD_02700at 2833.728 kb on - strand, within ECD_02700at 2833.729 kb on + strand, within ECD_02700at 2833.730 kb on - strand, within ECD_02700at 2833.753 kb on + strand, within ECD_02700at 2833.753 kb on + strand, within ECD_02700at 2833.754 kb on - strand, within ECD_02700at 2833.754 kb on - strand, within ECD_02700at 2833.803 kb on - strand, within ECD_02700at 2833.806 kb on + strand, within ECD_02700at 2833.807 kb on - strand, within ECD_02700at 2833.807 kb on - strand, within ECD_02700at 2833.818 kb on - strand, within ECD_02700at 2833.862 kb on - strand, within ECD_02700at 2833.862 kb on - strand, within ECD_02700at 2833.867 kb on - strand, within ECD_02700at 2833.920 kb on - strand, within ECD_02700at 2834.028 kb on - strand, within ECD_02700at 2834.028 kb on - strand, within ECD_02700at 2834.031 kb on + strand, within ECD_02700at 2834.031 kb on + strand, within ECD_02700at 2834.054 kb on + strand, within ECD_02700at 2834.055 kb on - strand, within ECD_02700at 2834.114 kb on - strand, within ECD_02700at 2834.114 kb on - strand, within ECD_02700at 2834.191 kb on + strand, within ECD_02700at 2834.192 kb on - strand, within ECD_02700at 2834.192 kb on - strand, within ECD_02700at 2834.213 kb on + strand, within ECD_02700at 2834.214 kb on - strand, within ECD_02700at 2834.214 kb on - strand, within ECD_02700at 2834.371 kb on + strandat 2834.463 kb on + strand, within ECD_02701at 2834.463 kb on + strand, within ECD_02701at 2834.463 kb on + strand, within ECD_02701at 2834.464 kb on - strand, within ECD_02701at 2834.464 kb on - strand, within ECD_02701at 2834.464 kb on - strand, within ECD_02701at 2834.506 kb on + strand, within ECD_02701at 2834.533 kb on - strand, within ECD_02701at 2834.533 kb on - strand, within ECD_02701at 2834.544 kb on + strand, within ECD_02701at 2834.544 kb on + strand, within ECD_02701at 2834.544 kb on + strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.546 kb on + strand, within ECD_02701at 2834.546 kb on + strand, within ECD_02701at 2834.546 kb on + strand, within ECD_02701at 2834.546 kb on + strand, within ECD_02701at 2834.546 kb on + strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.683 kb on + strand, within ECD_02701at 2834.797 kb on - strandat 2834.797 kb on - strandat 2834.800 kb on + strandat 2834.801 kb on - strandat 2834.828 kb on + strandat 2834.872 kb on - strandat 2834.945 kb on + strandat 2834.960 kb on - strandat 2834.960 kb on - strandat 2834.960 kb on - strandat 2835.059 kb on + strand, within ECD_02702at 2835.059 kb on + strand, within ECD_02702at 2835.059 kb on + strand, within ECD_02702at 2835.059 kb on + strand, within ECD_02702at 2835.059 kb on + strand, within ECD_02702at 2835.059 kb on + strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.108 kb on - strand, within ECD_02702at 2835.108 kb on - strand, within ECD_02702at 2835.122 kb on - strand, within ECD_02702at 2835.153 kb on + strand, within ECD_02702at 2835.280 kb on - strand, within ECD_02702at 2835.291 kb on - strand, within ECD_02702at 2835.291 kb on - strand, within ECD_02702at 2835.291 kb on - strand, within ECD_02702at 2835.299 kb on - strand, within ECD_02702at 2835.346 kb on + strand, within ECD_02702at 2835.346 kb on + strand, within ECD_02702at 2835.346 kb on + strand, within ECD_02702at 2835.347 kb on - strand, within ECD_02702at 2835.347 kb on - strand, within ECD_02702at 2835.347 kb on - strand, within ECD_02702

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,832,524 - ECD_02699 0.58 -0.1
2,832,524 - ECD_02699 0.58 -0.3
2,832,527 + ECD_02699 0.58 +0.5
2,832,528 - ECD_02699 0.58 +0.2
2,832,528 - ECD_02699 0.58 +0.5
2,832,528 - ECD_02699 0.58 -0.7
2,832,528 - ECD_02699 0.58 -0.2
2,832,536 - ECD_02699 0.59 +0.2
2,832,555 + ECD_02699 0.60 -0.1
2,832,556 - ECD_02699 0.60 +1.3
2,832,561 + ECD_02699 0.60 +0.4
2,832,561 + ECD_02699 0.60 -0.4
2,832,562 - ECD_02699 0.60 +1.0
2,832,727 + ECD_02699 0.67 +0.2
2,832,767 + ECD_02699 0.69 -0.0
2,832,767 + ECD_02699 0.69 +0.4
2,832,768 - ECD_02699 0.69 +1.0
2,832,768 - ECD_02699 0.69 +1.0
2,832,768 - ECD_02699 0.69 -0.2
2,832,768 - ECD_02699 0.69 +0.7
2,832,768 - ECD_02699 0.69 +0.0
2,832,768 - ECD_02699 0.69 -0.0
2,832,768 - ECD_02699 0.69 -0.1
2,832,804 + ECD_02699 0.71 +0.3
2,832,804 + ECD_02699 0.71 -0.5
2,832,805 - ECD_02699 0.71 -0.6
2,832,805 - ECD_02699 0.71 +0.9
2,832,807 + ECD_02699 0.71 -0.4
2,832,807 + ECD_02699 0.71 -0.0
2,832,807 + ECD_02699 0.71 -0.1
2,832,808 - ECD_02699 0.71 +0.4
2,832,808 - ECD_02699 0.71 -0.2
2,832,808 - ECD_02699 0.71 -0.1
2,832,808 - ECD_02699 0.71 -0.4
2,832,843 + ECD_02699 0.72 +0.7
2,832,843 + ECD_02699 0.72 -0.2
2,832,843 + ECD_02699 0.72 -0.2
2,832,843 + ECD_02699 0.72 -0.3
2,832,843 + ECD_02699 0.72 +0.4
2,832,844 - ECD_02699 0.72 +0.3
2,832,844 - ECD_02699 0.72 -0.2
2,832,844 - ECD_02699 0.72 -1.0
2,832,844 - ECD_02699 0.72 -1.0
2,832,873 + ECD_02699 0.74 -0.5
2,832,874 - ECD_02699 0.74 -1.1
2,832,874 - ECD_02699 0.74 -1.0
2,832,925 - ECD_02699 0.76 -0.6
2,832,925 - ECD_02699 0.76 -0.1
2,833,007 - ECD_02699 0.80 +0.2
2,833,028 - ECD_02699 0.81 +0.4
2,833,108 + ECD_02699 0.84 -0.2
2,833,108 + ECD_02699 0.84 +0.5
2,833,108 + ECD_02699 0.84 -0.8
2,833,109 - ECD_02699 0.84 +0.3
2,833,114 + ECD_02699 0.84 -0.1
2,833,140 + ECD_02699 0.86 +0.3
2,833,141 - ECD_02699 0.86 +0.7
2,833,202 - ECD_02699 0.88 +0.2
2,833,238 + ECD_02699 0.90 -0.4
2,833,239 - ECD_02699 0.90 -0.4
2,833,321 + -0.3
2,833,321 + +0.5
2,833,321 + +1.7
2,833,321 + +0.5
2,833,321 + +0.4
2,833,321 + -0.3
2,833,322 - +0.1
2,833,322 - +0.2
2,833,322 - +0.4
2,833,322 - +0.3
2,833,322 - -0.1
2,833,322 - +0.1
2,833,322 - -0.4
2,833,322 - +0.3
2,833,322 - +0.5
2,833,322 - +0.5
2,833,344 + -0.3
2,833,345 - -0.7
2,833,405 + +0.4
2,833,405 + +0.4
2,833,405 + +0.3
2,833,405 + -1.0
2,833,405 + -0.1
2,833,405 + +0.1
2,833,405 + -0.9
2,833,406 - +0.3
2,833,406 - -0.4
2,833,406 - +0.3
2,833,406 - -0.2
2,833,433 + +0.2
2,833,433 + -0.3
2,833,433 + +0.5
2,833,433 + +0.2
2,833,434 - +0.3
2,833,434 - +0.5
2,833,434 - -0.9
2,833,434 - +0.4
2,833,434 - -0.1
2,833,434 - -0.8
2,833,434 - -0.7
2,833,469 + -0.2
2,833,494 + -0.5
2,833,494 + +0.6
2,833,494 + +0.1
2,833,494 + +0.1
2,833,494 + +0.7
2,833,495 - -0.3
2,833,495 - +1.0
2,833,579 + ECD_02700 0.12 +0.7
2,833,580 - ECD_02700 0.12 +0.2
2,833,619 + ECD_02700 0.16 -0.4
2,833,620 - ECD_02700 0.16 +0.7
2,833,628 + ECD_02700 0.17 +0.7
2,833,628 + ECD_02700 0.17 +0.1
2,833,634 + ECD_02700 0.18 +0.5
2,833,634 + ECD_02700 0.18 -0.2
2,833,634 + ECD_02700 0.18 +0.0
2,833,658 + ECD_02700 0.21 +0.7
2,833,658 + ECD_02700 0.21 -0.1
2,833,706 + ECD_02700 0.26 -0.2
2,833,714 + ECD_02700 0.27 +0.1
2,833,714 + ECD_02700 0.27 +0.8
2,833,717 + ECD_02700 0.27 -0.3
2,833,718 - ECD_02700 0.28 +0.1
2,833,727 + ECD_02700 0.29 +1.0
2,833,728 - ECD_02700 0.29 +0.3
2,833,728 - ECD_02700 0.29 +0.2
2,833,729 + ECD_02700 0.29 +0.4
2,833,730 - ECD_02700 0.29 +0.6
2,833,753 + ECD_02700 0.32 +1.2
2,833,753 + ECD_02700 0.32 -0.5
2,833,754 - ECD_02700 0.32 +0.2
2,833,754 - ECD_02700 0.32 +0.2
2,833,803 - ECD_02700 0.37 -0.1
2,833,806 + ECD_02700 0.38 +0.3
2,833,807 - ECD_02700 0.38 -0.6
2,833,807 - ECD_02700 0.38 +0.2
2,833,818 - ECD_02700 0.39 -1.1
2,833,862 - ECD_02700 0.44 +0.4
2,833,862 - ECD_02700 0.44 +0.3
2,833,867 - ECD_02700 0.44 +0.2
2,833,920 - ECD_02700 0.51 +0.4
2,834,028 - ECD_02700 0.63 -0.3
2,834,028 - ECD_02700 0.63 +0.2
2,834,031 + ECD_02700 0.63 +0.3
2,834,031 + ECD_02700 0.63 +0.8
2,834,054 + ECD_02700 0.66 +0.8
2,834,055 - ECD_02700 0.66 +0.3
2,834,114 - ECD_02700 0.73 +0.6
2,834,114 - ECD_02700 0.73 +0.1
2,834,191 + ECD_02700 0.81 +0.8
2,834,192 - ECD_02700 0.81 -0.0
2,834,192 - ECD_02700 0.81 -0.7
2,834,213 + ECD_02700 0.84 +1.0
2,834,214 - ECD_02700 0.84 -0.4
2,834,214 - ECD_02700 0.84 -0.6
2,834,371 + +1.3
2,834,463 + ECD_02701 0.23 -0.2
2,834,463 + ECD_02701 0.23 +1.2
2,834,463 + ECD_02701 0.23 +0.7
2,834,464 - ECD_02701 0.24 -0.4
2,834,464 - ECD_02701 0.24 +0.3
2,834,464 - ECD_02701 0.24 +1.3
2,834,506 + ECD_02701 0.32 +0.3
2,834,533 - ECD_02701 0.38 -0.1
2,834,533 - ECD_02701 0.38 +0.4
2,834,544 + ECD_02701 0.40 +0.2
2,834,544 + ECD_02701 0.40 -0.3
2,834,544 + ECD_02701 0.40 +0.4
2,834,545 - ECD_02701 0.40 +0.2
2,834,545 - ECD_02701 0.40 +0.4
2,834,545 - ECD_02701 0.40 -0.3
2,834,545 - ECD_02701 0.40 +0.2
2,834,545 - ECD_02701 0.40 -0.1
2,834,545 - ECD_02701 0.40 +0.3
2,834,546 + ECD_02701 0.41 -0.2
2,834,546 + ECD_02701 0.41 +0.5
2,834,546 + ECD_02701 0.41 +0.1
2,834,546 + ECD_02701 0.41 -1.8
2,834,546 + ECD_02701 0.41 +0.5
2,834,547 - ECD_02701 0.41 +0.3
2,834,547 - ECD_02701 0.41 +0.5
2,834,547 - ECD_02701 0.41 -0.2
2,834,547 - ECD_02701 0.41 -0.2
2,834,547 - ECD_02701 0.41 -0.3
2,834,547 - ECD_02701 0.41 +0.4
2,834,547 - ECD_02701 0.41 -0.0
2,834,547 - ECD_02701 0.41 -0.2
2,834,547 - ECD_02701 0.41 -0.0
2,834,547 - ECD_02701 0.41 -0.1
2,834,683 + ECD_02701 0.69 +0.4
2,834,797 - +0.2
2,834,797 - +0.3
2,834,800 + +0.2
2,834,801 - +0.6
2,834,828 + -0.1
2,834,872 - +0.0
2,834,945 + -3.1
2,834,960 - +0.5
2,834,960 - +0.6
2,834,960 - +0.3
2,835,059 + ECD_02702 0.11 +0.0
2,835,059 + ECD_02702 0.11 -0.8
2,835,059 + ECD_02702 0.11 -0.7
2,835,059 + ECD_02702 0.11 +0.7
2,835,059 + ECD_02702 0.11 +0.2
2,835,059 + ECD_02702 0.11 +0.5
2,835,060 - ECD_02702 0.11 +1.2
2,835,060 - ECD_02702 0.11 +0.1
2,835,060 - ECD_02702 0.11 +0.8
2,835,060 - ECD_02702 0.11 +0.8
2,835,060 - ECD_02702 0.11 -0.4
2,835,060 - ECD_02702 0.11 +0.4
2,835,060 - ECD_02702 0.11 -1.0
2,835,060 - ECD_02702 0.11 +0.6
2,835,108 - ECD_02702 0.13 +0.3
2,835,108 - ECD_02702 0.13 -1.7
2,835,122 - ECD_02702 0.14 +0.2
2,835,153 + ECD_02702 0.16 +0.3
2,835,280 - ECD_02702 0.23 +0.2
2,835,291 - ECD_02702 0.24 +0.4
2,835,291 - ECD_02702 0.24 -0.2
2,835,291 - ECD_02702 0.24 +0.8
2,835,299 - ECD_02702 0.24 -0.2
2,835,346 + ECD_02702 0.27 +0.2
2,835,346 + ECD_02702 0.27 +0.5
2,835,346 + ECD_02702 0.27 +0.2
2,835,347 - ECD_02702 0.27 +0.3
2,835,347 - ECD_02702 0.27 +0.0
2,835,347 - ECD_02702 0.27 +0.2

Or see this region's nucleotide sequence