Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26740 and PS417_26745 are separated by 7 nucleotides PS417_26745 and PS417_26750 are separated by 21 nucleotides PS417_26750 and PS417_26755 overlap by 4 nucleotides
PS417_26740: PS417_26740 - homoserine acetyltransferase, at 5,778,157 to 5,779,296
_26740
PS417_26745: PS417_26745 - methionine biosynthesis protein MetW, at 5,779,304 to 5,779,924
_26745
PS417_26750: PS417_26750 - homoserine acetyltransferase, at 5,779,946 to 5,780,380
_26750
PS417_26755: PS417_26755 - nucleoside-triphosphate diphosphatase, at 5,780,377 to 5,780,973
_26755
Position (kb) 5779
5780 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 5778.665 kb on - strand, within PS417_26740 at 5778.850 kb on - strand, within PS417_26740 at 5778.856 kb on + strand, within PS417_26740 at 5778.856 kb on + strand, within PS417_26740 at 5778.856 kb on + strand, within PS417_26740 at 5778.857 kb on - strand, within PS417_26740 at 5778.955 kb on + strand, within PS417_26740 at 5779.033 kb on + strand, within PS417_26740 at 5779.196 kb on - strand at 5779.196 kb on - strand at 5779.252 kb on + strand at 5779.253 kb on - strand at 5779.273 kb on + strand at 5779.274 kb on - strand at 5779.709 kb on + strand, within PS417_26745 at 5779.719 kb on - strand, within PS417_26745 at 5779.719 kb on - strand, within PS417_26745 at 5779.719 kb on - strand, within PS417_26745 at 5779.719 kb on - strand, within PS417_26745 at 5779.841 kb on - strand, within PS417_26745 at 5779.845 kb on + strand, within PS417_26745 at 5779.845 kb on + strand, within PS417_26745 at 5779.845 kb on + strand, within PS417_26745 at 5779.845 kb on + strand, within PS417_26745 at 5779.922 kb on + strand at 5779.923 kb on - strand at 5780.012 kb on - strand, within PS417_26750 at 5780.013 kb on + strand, within PS417_26750 at 5780.013 kb on + strand, within PS417_26750 at 5780.014 kb on - strand, within PS417_26750 at 5780.057 kb on + strand, within PS417_26750 at 5780.058 kb on - strand, within PS417_26750 at 5780.115 kb on + strand, within PS417_26750 at 5780.308 kb on + strand, within PS417_26750 at 5780.388 kb on + strand at 5780.400 kb on - strand at 5780.632 kb on + strand, within PS417_26755 at 5780.845 kb on + strand, within PS417_26755
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 5,778,665 - PS417_26740 0.45 -3.4 5,778,850 - PS417_26740 0.61 -4.4 5,778,856 + PS417_26740 0.61 -5.3 5,778,856 + PS417_26740 0.61 -5.9 5,778,856 + PS417_26740 0.61 -3.5 5,778,857 - PS417_26740 0.61 -5.3 5,778,955 + PS417_26740 0.70 -6.1 5,779,033 + PS417_26740 0.77 -1.9 5,779,196 - -0.2 5,779,196 - -3.5 5,779,252 + -4.0 5,779,253 - -1.1 5,779,273 + -4.3 5,779,274 - -5.2 5,779,709 + PS417_26745 0.65 -2.7 5,779,719 - PS417_26745 0.67 +1.1 5,779,719 - PS417_26745 0.67 -5.4 5,779,719 - PS417_26745 0.67 -4.9 5,779,719 - PS417_26745 0.67 -4.2 5,779,841 - PS417_26745 0.86 -0.1 5,779,845 + PS417_26745 0.87 -3.4 5,779,845 + PS417_26745 0.87 -2.7 5,779,845 + PS417_26745 0.87 -2.7 5,779,845 + PS417_26745 0.87 -5.9 5,779,922 + -0.2 5,779,923 - -0.3 5,780,012 - PS417_26750 0.15 -0.5 5,780,013 + PS417_26750 0.15 -0.1 5,780,013 + PS417_26750 0.15 -0.0 5,780,014 - PS417_26750 0.16 +0.8 5,780,057 + PS417_26750 0.26 -0.2 5,780,058 - PS417_26750 0.26 +1.5 5,780,115 + PS417_26750 0.39 -0.2 5,780,308 + PS417_26750 0.83 -0.6 5,780,388 + -0.1 5,780,400 - +0.3 5,780,632 + PS417_26755 0.43 +0.3 5,780,845 + PS417_26755 0.78 -0.1
Or see this region's nucleotide sequence