Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_18565

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
4,318,168	+		CA264_18560	0.11	+1.1
4,318,217	+		CA264_18560	0.16	+1.4
4,318,217	+		CA264_18560	0.16	-0.2
4,318,218	-		CA264_18560	0.16	+0.8
4,318,218	-		CA264_18560	0.16	-1.0
4,318,318	+		CA264_18560	0.25	+0.4
4,318,319	-		CA264_18560	0.25	+0.2
4,318,332	+		CA264_18560	0.26	-0.4
4,318,332	+		CA264_18560	0.26	+0.3
4,318,335	+		CA264_18560	0.26	+0.4
4,318,336	-				+2.1
4,318,378	+		CA264_18560	0.30	-0.8
4,318,379	-		CA264_18560	0.30	+0.3
4,318,393	+		CA264_18560	0.32	+0.2
4,318,431	-		CA264_18560	0.35	+0.3
4,318,457	+		CA264_18560	0.37	+0.2
4,318,474	+		CA264_18560	0.39	+0.7
4,318,500	-		CA264_18560	0.41	+0.3
4,318,500	-		CA264_18560	0.41	+0.0
4,318,542	-		CA264_18560	0.45	-0.3
4,318,563	-		CA264_18560	0.47	-0.1
4,318,576	+		CA264_18560	0.48	-0.3
4,318,642	+		CA264_18560	0.54	+0.3
4,318,649	-		CA264_18560	0.55	+0.1
4,318,748	+		CA264_18560	0.64	+0.1
4,318,749	-		CA264_18560	0.64	+0.6
4,318,769	+		CA264_18560	0.66	+0.2
4,318,769	+		CA264_18560	0.66	-0.1
4,318,771	+		CA264_18560	0.66	+0.0
4,318,771	+		CA264_18560	0.66	-1.5
4,318,827	-		CA264_18560	0.71	-2.5
4,318,877	+		CA264_18560	0.76	+0.8
4,318,951	+		CA264_18560	0.83	-0.6
4,318,961	+		CA264_18560	0.83	+1.0
4,318,962	-		CA264_18560	0.84	+0.3
4,318,964	+		CA264_18560	0.84	+0.5
4,318,965	-		CA264_18560	0.84	-0.1
4,318,994	+		CA264_18560	0.86	+1.4
4,319,002	+		CA264_18560	0.87	+1.1
4,319,003	-		CA264_18560	0.87	+0.5
4,319,011	+		CA264_18560	0.88	+0.0
4,319,012	-		CA264_18560	0.88	-0.9
4,319,016	+		CA264_18560	0.88	-0.8
4,319,024	+		CA264_18560	0.89	+0.2
4,319,025	-		CA264_18560	0.89	-0.3
4,319,076	+				+0.0
4,319,076	+				-0.4
4,319,077	-				-0.1
4,319,080	+				-0.1
4,319,080	+				-0.3
4,319,081	-				-0.1
4,319,081	-				+1.2
4,319,081	-				+0.2
4,319,150	-				+0.5
4,319,161	+				+0.1
4,319,161	+				+0.4
4,319,226	+				-0.6
4,319,227	-				+0.2
4,319,256	+				+0.0
4,319,273	+		CA264_18565	0.11	-0.5
4,319,273	+		CA264_18565	0.11	-0.3
4,319,280	+		CA264_18565	0.11	+0.2
4,319,281	-		CA264_18565	0.11	+0.2
4,319,287	+		CA264_18565	0.12	-0.9
4,319,288	-		CA264_18565	0.12	-2.3
4,319,297	+		CA264_18565	0.13	-1.4
4,319,300	-		CA264_18565	0.13	+0.7
4,319,310	+		CA264_18565	0.14	-0.4
4,319,310	+		CA264_18565	0.14	-0.6
4,319,311	-		CA264_18565	0.14	-0.2
4,319,334	+		CA264_18565	0.16	-0.0
4,319,335	-		CA264_18565	0.16	-0.3
4,319,337	-		CA264_18565	0.16	-0.4
4,319,337	-		CA264_18565	0.16	-0.8
4,319,352	+		CA264_18565	0.17	+1.1
4,319,366	+		CA264_18565	0.18	-0.0
4,319,367	-		CA264_18565	0.18	+2.3
4,319,367	-		CA264_18565	0.18	-0.6
4,319,367	-		CA264_18565	0.18	-0.2
4,319,368	+		CA264_18565	0.19	+0.7
4,319,368	+		CA264_18565	0.19	-0.9
4,319,368	+		CA264_18565	0.19	+0.1
4,319,369	-		CA264_18565	0.19	-0.3
4,319,371	-		CA264_18565	0.19	+0.0
4,319,400	-		CA264_18565	0.21	+0.9
4,319,405	-		CA264_18565	0.22	-0.0
4,319,424	+		CA264_18565	0.23	-0.3
4,319,425	-		CA264_18565	0.23	-1.9
4,319,453	-		CA264_18565	0.26	-1.0
4,319,550	+		CA264_18565	0.34	-0.1
4,319,551	-		CA264_18565	0.34	+1.0
4,319,552	+		CA264_18565	0.34	-0.3
4,319,553	-		CA264_18565	0.34	-0.6
4,319,557	+		CA264_18565	0.34	-0.8
4,319,557	+		CA264_18565	0.34	-0.4
4,319,575	-		CA264_18565	0.36	+0.7
4,319,594	-		CA264_18565	0.37	-0.0
4,319,600	-		CA264_18565	0.38	-0.2
4,319,610	+		CA264_18565	0.39	+1.7
4,319,614	+		CA264_18565	0.39	+0.6
4,319,614	+		CA264_18565	0.39	-0.1
4,319,620	+		CA264_18565	0.39	+0.7
4,319,620	+		CA264_18565	0.39	+0.6
4,319,634	-		CA264_18565	0.41	+0.8
4,319,636	+		CA264_18565	0.41	-0.2
4,319,639	+		CA264_18565	0.41	+1.4
4,319,639	+		CA264_18565	0.41	-0.0
4,319,640	-		CA264_18565	0.41	-0.1
4,319,648	-		CA264_18565	0.42	-1.1
4,319,650	+		CA264_18565	0.42	+1.7
4,319,650	+		CA264_18565	0.42	-0.1
4,319,650	+		CA264_18565	0.42	-0.1
4,319,651	-		CA264_18565	0.42	-0.3
4,319,653	+		CA264_18565	0.42	+1.3
4,319,707	+		CA264_18565	0.47	-0.9
4,319,746	+		CA264_18565	0.50	+0.2
4,319,748	+		CA264_18565	0.50	-0.4
4,319,767	+		CA264_18565	0.52	-0.4
4,319,781	+		CA264_18565	0.53	+2.1
4,319,782	-		CA264_18565	0.53	+0.0
4,319,785	+		CA264_18565	0.53	-0.5
4,319,785	+		CA264_18565	0.53	-0.2
4,319,786	-		CA264_18565	0.53	-1.5
4,319,786	-		CA264_18565	0.53	-0.8
4,319,786	-		CA264_18565	0.53	-1.0
4,319,788	+		CA264_18565	0.53	+0.4
4,319,807	+		CA264_18565	0.55	+0.0
4,319,860	+		CA264_18565	0.59	+0.2
4,319,861	-		CA264_18565	0.59	-2.1
4,319,865	+		CA264_18565	0.60	+0.3
4,319,865	+		CA264_18565	0.60	-0.2
4,319,878	+		CA264_18565	0.61	+1.0
4,319,902	+		CA264_18565	0.63	+0.2
4,319,906	-		CA264_18565	0.63	+0.3
4,319,908	+		CA264_18565	0.63	+0.1
4,319,908	+		CA264_18565	0.63	+1.0
4,319,908	+		CA264_18565	0.63	-0.1
4,319,926	-		CA264_18565	0.65	+0.3
4,319,930	-		CA264_18565	0.65	+0.5
4,319,938	+		CA264_18565	0.66	+0.7
4,319,945	+		CA264_18565	0.66	-0.3
4,319,982	+		CA264_18565	0.69	-0.0
4,319,983	-		CA264_18565	0.70	-1.0
4,319,998	-		CA264_18565	0.71	-0.9
4,320,001	+		CA264_18565	0.71	+0.1
4,320,016	+		CA264_18565	0.72	-0.5
4,320,030	+		CA264_18565	0.73	-1.1
4,320,031	-		CA264_18565	0.74	-0.6
4,320,131	-		CA264_18565	0.82	-1.3
4,320,164	-		CA264_18565	0.85	-0.3
4,320,164	-		CA264_18565	0.85	-0.4
4,320,202	+		CA264_18565	0.88	-0.2
4,320,203	-		CA264_18565	0.88	+0.6
4,320,322	-				+0.8
4,320,337	+				-0.3
4,320,338	-				-0.0
4,320,347	+				+0.4
4,320,368	+				-0.1
4,320,369	-				+1.1
4,320,371	+				-0.5
4,320,371	+				-0.9
4,320,372	-				+0.7
4,320,372	-				+0.3
4,320,385	+				+0.1
4,320,386	-				+0.1
4,320,390	-				-0.4
4,320,426	-				-0.2
4,320,432	-				-1.0
4,320,483	+				+0.7
4,320,504	+				-1.2
4,320,581	+		CA264_18570	0.30	-0.2
4,320,581	+		CA264_18570	0.30	-0.4
4,320,592	-		CA264_18570	0.34	-0.1
4,320,602	+		CA264_18570	0.37	-0.1
4,320,603	-		CA264_18570	0.38	-0.2
4,320,603	-		CA264_18570	0.38	-0.7
4,320,661	+		CA264_18570	0.57	-0.1
4,320,662	-		CA264_18570	0.57	-0.6
4,320,662	-		CA264_18570	0.57	-0.0
4,320,662	-		CA264_18570	0.57	+0.0
4,320,662	-		CA264_18570	0.57	-0.0
4,320,662	-		CA264_18570	0.57	+0.2
4,320,662	-		CA264_18570	0.57	+0.3
4,320,662	-		CA264_18570	0.57	-0.0
4,320,662	-		CA264_18570	0.57	-0.2
4,320,662	-		CA264_18570	0.57	+0.5
4,320,665	+		CA264_18570	0.58	-0.3
4,320,666	-		CA264_18570	0.58	-0.1
4,320,735	+		CA264_18570	0.81	+0.2
4,320,755	+		CA264_18570	0.87	-0.1
4,320,755	+		CA264_18570	0.87	+1.1
4,320,756	-		CA264_18570	0.88	+0.4
4,320,756	-		CA264_18570	0.88	-0.1
4,320,756	-		CA264_18570	0.88	+0.1
4,320,760	-		CA264_18570	0.89	+0.2
4,320,766	+				-0.2
4,320,766	+				-1.3
4,320,767	-				-0.4
4,320,767	-				-0.4
4,320,795	-				-0.1
4,320,803	-				-2.2
4,320,807	+				-0.9
4,320,808	-				+0.2
4,320,834	-				-0.6
4,320,914	+		CA264_18575	0.23	-0.5
4,320,915	-		CA264_18575	0.23	-1.2
4,320,943	+		CA264_18575	0.29	+0.8
4,321,042	+		CA264_18575	0.47	-0.6
4,321,043	-		CA264_18575	0.47	+0.2
4,321,103	+		CA264_18575	0.59	+0.0
4,321,151	-		CA264_18575	0.68	-1.2
4,321,151	-		CA264_18575	0.68	+0.2
4,321,184	+		CA264_18575	0.74	-0.2
4,321,217	+		CA264_18575	0.80	-0.0
4,321,228	+		CA264_18575	0.82	+0.6
4,321,231	+		CA264_18575	0.83	+0.9
4,321,231	+		CA264_18575	0.83	-0.5
4,321,244	+		CA264_18575	0.85	-0.7
4,321,256	+		CA264_18575	0.87	-0.3
4,321,257	-		CA264_18575	0.87	-1.4
4,321,257	-		CA264_18575	0.87	-0.1
4,321,268	+		CA264_18575	0.90	+0.2
4,321,269	-		CA264_18575	0.90	-0.9
4,321,269	-		CA264_18575	0.90	-0.2
4,321,278	-				-0.6
4,321,311	+				-0.3
4,321,312	-				+0.1
4,321,312	-				-0.3
4,321,319	+				+0.8
4,321,321	+				-0.4
4,321,349	-				-0.6