Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16670

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,874,227	-		CA264_16665	0.13	-0.9
3,874,271	+		CA264_16665	0.17	+0.5
3,874,271	+		CA264_16665	0.17	-0.2
3,874,271	+		CA264_16665	0.17	+0.0
3,874,271	+		CA264_16665	0.17	+0.5
3,874,271	+		CA264_16665	0.17	-1.9
3,874,274	+		CA264_16665	0.18	-0.5
3,874,283	-		CA264_16665	0.19	+0.9
3,874,283	-		CA264_16665	0.19	-1.1
3,874,335	+		CA264_16665	0.25	-1.7
3,874,335	+		CA264_16665	0.25	+0.1
3,874,414	+		CA264_16665	0.33	+0.2
3,874,441	+		CA264_16665	0.36	+1.4
3,874,442	-		CA264_16665	0.36	-0.6
3,874,479	+		CA264_16665	0.40	+1.4
3,874,479	+		CA264_16665	0.40	-0.8
3,874,501	+		CA264_16665	0.43	-0.6
3,874,524	+		CA264_16665	0.45	-0.0
3,874,525	-		CA264_16665	0.45	+0.4
3,874,525	-		CA264_16665	0.45	-0.3
3,874,582	-		CA264_16665	0.52	-0.6
3,874,614	+		CA264_16665	0.55	-0.8
3,874,700	-		CA264_16665	0.65	-0.4
3,874,700	-		CA264_16665	0.65	+0.8
3,874,713	+		CA264_16665	0.66	+1.4
3,874,713	+		CA264_16665	0.66	-1.0
3,874,714	-		CA264_16665	0.66	+2.4
3,874,760	-		CA264_16665	0.71	-0.9
3,874,775	-		CA264_16665	0.73	+1.3
3,874,775	-		CA264_16665	0.73	+1.9
3,874,815	-		CA264_16665	0.77	-0.4
3,874,816	+		CA264_16665	0.77	+0.1
3,874,817	-		CA264_16665	0.78	+0.1
3,874,837	-		CA264_16665	0.80	+0.1
3,874,881	-		CA264_16665	0.85	-0.4
3,874,906	+		CA264_16665	0.87	-0.6
3,874,931	+				+0.5
3,874,931	+				-0.1
3,874,932	-				+0.1
3,874,956	+				+0.2
3,874,957	-				+0.0
3,875,042	+				+0.4
3,875,043	-				+0.4
3,875,043	-				-0.5
3,875,043	-				-0.5
3,875,044	+				-0.3
3,875,045	-				-0.4
3,875,045	-				+0.2
3,875,046	+				+0.2
3,875,047	-				-1.2
3,875,047	-				-0.2
3,875,047	-				-0.2
3,875,052	+				+0.0
3,875,052	+				-0.2
3,875,053	-				+1.1
3,875,053	-				-1.3
3,875,053	-				-0.4
3,875,053	-				-0.4
3,875,053	-				+1.6
3,875,056	+				+0.6
3,875,057	-				+0.7
3,875,073	-				-0.3
3,875,141	+				+0.4
3,875,172	+				+0.5
3,875,172	+				-0.2
3,875,188	+				-0.7
3,875,216	-				-1.2
3,875,226	+				-0.6
3,875,226	+				-0.3
3,875,261	+				+0.2
3,875,291	+				+0.2
3,875,291	+				+0.6
3,875,291	+				-0.4
3,875,291	+				+0.3
3,875,343	+				-0.4
3,875,343	+				+0.4
3,875,348	-				+2.3
3,875,348	-				+1.2
3,875,384	+		CA264_16670	0.11	+0.5
3,875,384	+		CA264_16670	0.11	+0.3
3,875,385	-		CA264_16670	0.11	-1.2
3,875,385	-		CA264_16670	0.11	-0.1
3,875,417	-		CA264_16670	0.12	+1.3
3,875,430	-		CA264_16670	0.13	+0.2
3,875,446	+		CA264_16670	0.14	-0.1
3,875,446	+		CA264_16670	0.14	-1.1
3,875,465	-		CA264_16670	0.14	-0.1
3,875,493	-		CA264_16670	0.16	-0.5
3,875,564	-		CA264_16670	0.19	+1.8
3,875,564	-		CA264_16670	0.19	+0.5
3,875,590	-		CA264_16670	0.20	+1.0
3,875,658	+		CA264_16670	0.24	+0.1
3,875,659	-		CA264_16670	0.24	+0.2
3,875,775	+		CA264_16670	0.29	-0.6
3,875,804	-		CA264_16670	0.31	+1.1
3,875,836	+		CA264_16670	0.32	-0.2
3,875,836	+		CA264_16670	0.32	+0.4
3,875,856	+		CA264_16670	0.33	+0.8
3,875,859	-		CA264_16670	0.33	-0.9
3,875,922	+		CA264_16670	0.36	-0.4
3,875,927	-		CA264_16670	0.37	+0.7
3,875,961	-		CA264_16670	0.38	+0.6
3,875,961	-		CA264_16670	0.38	-1.2
3,875,980	+		CA264_16670	0.39	+0.5
3,875,980	+		CA264_16670	0.39	-0.6
3,875,981	-		CA264_16670	0.39	-0.4
3,876,021	+		CA264_16670	0.41	-0.0
3,876,021	+		CA264_16670	0.41	-0.1
3,876,022	-		CA264_16670	0.41	+1.1
3,876,022	-		CA264_16670	0.41	-1.1
3,876,022	-		CA264_16670	0.41	-0.5
3,876,022	-		CA264_16670	0.41	+0.1
3,876,026	+		CA264_16670	0.41	-0.6
3,876,027	-		CA264_16670	0.41	-1.1
3,876,027	-		CA264_16670	0.41	+0.4
3,876,030	-		CA264_16670	0.41	+0.4
3,876,048	-		CA264_16670	0.42	-0.0
3,876,068	+		CA264_16670	0.43	+0.4
3,876,069	-		CA264_16670	0.43	-0.6
3,876,111	+		CA264_16670	0.45	+0.5
3,876,118	+		CA264_16670	0.46	+0.3
3,876,119	-		CA264_16670	0.46	+0.2
3,876,123	-		CA264_16670	0.46	+0.2
3,876,196	+		CA264_16670	0.49	+0.4
3,876,256	+		CA264_16670	0.52	-1.0
3,876,271	-		CA264_16670	0.53	+0.5
3,876,273	+		CA264_16670	0.53	+0.2
3,876,294	+		CA264_16670	0.54	-0.3
3,876,294	+		CA264_16670	0.54	+0.4
3,876,294	+		CA264_16670	0.54	-0.1
3,876,295	-		CA264_16670	0.54	+1.0
3,876,454	+		CA264_16670	0.62	-0.1
3,876,454	+		CA264_16670	0.62	-0.6
3,876,455	-		CA264_16670	0.62	-0.0
3,876,455	-		CA264_16670	0.62	+0.4
3,876,502	-		CA264_16670	0.64	-0.3
3,876,532	-		CA264_16670	0.66	-0.6
3,876,532	-		CA264_16670	0.66	-0.0
3,876,575	-		CA264_16670	0.68	-0.6
3,876,584	-		CA264_16670	0.68	-1.1
3,876,584	-		CA264_16670	0.68	+0.1
3,876,596	+		CA264_16670	0.69	+0.1
3,876,614	+		CA264_16670	0.69	+0.8
3,876,615	-		CA264_16670	0.69	+0.5
3,876,615	-		CA264_16670	0.69	-0.1
3,876,617	+		CA264_16670	0.70	-0.2
3,876,617	+		CA264_16670	0.70	-0.3
3,876,617	+		CA264_16670	0.70	-1.0
3,876,618	-		CA264_16670	0.70	+0.0
3,876,618	-		CA264_16670	0.70	+0.8
3,876,626	+		CA264_16670	0.70	-0.1
3,876,627	-		CA264_16670	0.70	-1.3
3,876,679	+		CA264_16670	0.73	+1.2
3,876,925	-		CA264_16670	0.84	+0.3
3,877,004	+		CA264_16670	0.88	+0.1
3,877,005	-		CA264_16670	0.88	+0.2
3,877,127	+				+0.3
3,877,128	-				-0.2
3,877,142	+				+0.6
3,877,142	-				-1.1
3,877,205	-				-0.0
3,877,208	-				-1.0
3,877,234	-				+0.0
3,877,234	-				-0.6
3,877,234	-				-1.0
3,877,234	-				-0.1
3,877,236	-				-0.4
3,877,237	+				+0.3
3,877,238	-				+1.0
3,877,251	+				+0.4
3,877,251	+				+2.1
3,877,280	+				-0.4
3,877,280	+				-0.3
3,877,355	+				+0.7
3,877,356	-				-0.2
3,877,364	-				-0.1
3,877,364	-				+2.0
3,877,364	-				-0.3
3,877,381	+				-0.0
3,877,381	+				-0.3
3,877,390	-				+0.9
3,877,421	+				+0.1
3,877,422	-				-0.0
3,877,422	-				-0.2
3,877,427	+				+1.4
3,877,427	+				+0.4
3,877,449	+				-0.3
3,877,536	+		CA264_16675	0.11	-0.2
3,877,536	+		CA264_16675	0.11	+1.5
3,877,536	+		CA264_16675	0.11	-0.5
3,877,537	-		CA264_16675	0.11	-0.8
3,877,538	+		CA264_16675	0.11	-1.5
3,877,539	-		CA264_16675	0.11	-0.2
3,877,545	+		CA264_16675	0.12	+0.5
3,877,545	+		CA264_16675	0.12	-0.4
3,877,546	-		CA264_16675	0.12	+0.3
3,877,546	-		CA264_16675	0.12	+1.6
3,877,575	-		CA264_16675	0.14	+0.2
3,877,706	+		CA264_16675	0.24	-0.2
3,877,714	+		CA264_16675	0.24	+1.1
3,877,768	+		CA264_16675	0.28	-0.9
3,877,769	-		CA264_16675	0.29	-0.3
3,877,798	+		CA264_16675	0.31	-0.2
3,877,798	+		CA264_16675	0.31	-0.1
3,877,799	-		CA264_16675	0.31	+0.4
3,877,803	-		CA264_16675	0.31	-0.6
3,877,803	-		CA264_16675	0.31	-0.1
3,877,842	-		CA264_16675	0.34	-0.6
3,877,842	-		CA264_16675	0.34	-1.2
3,877,850	-		CA264_16675	0.35	-0.1
3,877,858	+		CA264_16675	0.35	-0.0
3,877,859	-		CA264_16675	0.35	-0.3
3,877,902	+		CA264_16675	0.39	-0.0
3,877,902	+		CA264_16675	0.39	-0.1
3,877,903	-		CA264_16675	0.39	+0.7
3,877,903	-		CA264_16675	0.39	-0.2
3,877,976	+		CA264_16675	0.44	+0.8
3,878,029	-		CA264_16675	0.48	+0.1
3,878,057	+		CA264_16675	0.50	+0.4
3,878,058	-		CA264_16675	0.50	-1.3
3,878,103	+		CA264_16675	0.54	-0.3
3,878,103	+		CA264_16675	0.54	-0.4
3,878,104	-		CA264_16675	0.54	-0.2
3,878,185	-		CA264_16675	0.60	-0.0
3,878,185	-		CA264_16675	0.60	+0.6
3,878,227	+		CA264_16675	0.63	+0.3
3,878,227	+		CA264_16675	0.63	-0.8
3,878,228	-		CA264_16675	0.63	-0.0