Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15315

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,582,452	+				-0.2
3,582,452	+				-0.0
3,582,452	+				-0.2
3,582,453	-				+0.6
3,582,453	-				+1.0
3,582,537	+		CA264_15310	0.17	-1.7
3,582,544	+		CA264_15310	0.17	-1.3
3,582,631	+		CA264_15310	0.26	-0.5
3,582,631	+		CA264_15310	0.26	+0.3
3,582,658	+		CA264_15310	0.28	+0.6
3,582,659	-		CA264_15310	0.29	+0.6
3,582,666	+		CA264_15310	0.29	+0.2
3,582,673	+		CA264_15310	0.30	-1.8
3,582,674	-		CA264_15310	0.30	+0.0
3,582,678	-		CA264_15310	0.30	+0.8
3,582,678	-		CA264_15310	0.30	-0.2
3,582,685	-		CA264_15310	0.31	+0.9
3,582,688	+		CA264_15310	0.31	+0.6
3,582,843	-		CA264_15310	0.47	-0.5
3,582,843	-		CA264_15310	0.47	+0.0
3,583,184	-		CA264_15310	0.80	+0.1
3,583,184	-		CA264_15310	0.80	-0.1
3,583,366	-				-0.2
3,583,371	+				-1.7
3,583,372	-				+0.0
3,583,474	+				-0.1
3,583,494	+				+0.2
3,583,494	+				+0.3
3,583,494	+				+0.2
3,583,494	+				-0.7
3,583,494	+				+2.6
3,583,494	+				-0.1
3,583,495	-				-1.4
3,583,495	-				+0.1
3,583,585	+		CA264_15315	0.17	-0.8
3,583,673	-		CA264_15315	0.25	-1.1
3,583,707	-		CA264_15315	0.29	-0.0
3,583,745	+		CA264_15315	0.32	+0.6
3,583,827	+		CA264_15315	0.40	-0.0
3,583,831	+		CA264_15315	0.41	+0.2
3,583,831	+		CA264_15315	0.41	-0.3
3,583,831	+		CA264_15315	0.41	+0.3
3,583,831	+		CA264_15315	0.41	+0.6
3,583,840	-		CA264_15315	0.42	-0.6
3,583,840	-		CA264_15315	0.42	-0.2
3,583,853	+		CA264_15315	0.43	-0.9
3,583,878	+		CA264_15315	0.45	+0.1
3,583,879	-		CA264_15315	0.45	-0.1
3,583,882	+		CA264_15315	0.46	-0.3
3,583,909	+		CA264_15315	0.48	-0.2
3,583,969	-		CA264_15315	0.54	+0.8
3,584,005	-		CA264_15315	0.57	+0.6
3,584,005	-		CA264_15315	0.57	-0.2
3,584,058	+		CA264_15315	0.63	+0.0
3,584,059	-		CA264_15315	0.63	+0.4
3,584,060	+		CA264_15315	0.63	+0.4
3,584,123	+		CA264_15315	0.69	+1.7
3,584,123	+		CA264_15315	0.69	+0.6
3,584,130	-		CA264_15315	0.70	-0.6
3,584,132	-		CA264_15315	0.70	-0.4
3,584,142	+		CA264_15315	0.71	+0.8
3,584,177	-		CA264_15315	0.74	+0.2
3,584,179	+		CA264_15315	0.74	+0.2
3,584,179	+		CA264_15315	0.74	+0.8
3,584,182	+		CA264_15315	0.75	+0.8
3,584,209	+		CA264_15315	0.77	+0.3
3,584,209	+		CA264_15315	0.77	+0.6
3,584,269	+		CA264_15315	0.83	+0.0
3,584,282	-		CA264_15315	0.84	+1.0
3,584,282	-		CA264_15315	0.84	+0.1
3,584,309	-		CA264_15315	0.87	-0.7
3,584,447	-				+0.4
3,584,450	-				-0.4
3,584,450	-				+0.0
3,584,491	-				-0.4
3,584,491	-				+0.2
3,584,499	+				+0.0
3,584,506	+				+0.1
3,584,527	+				-0.3
3,584,528	-				+0.2
3,584,570	-				-0.2
3,584,570	-				+0.0
3,584,577	-				-0.0
3,584,579	-				-0.3
3,584,580	+				-1.2
3,584,582	+				+0.4
3,584,582	+				+0.6
3,584,582	+				-0.6
3,584,582	+				-0.2
3,584,599	+				-0.1
3,584,600	-				+0.8
3,584,641	-				-0.3
3,584,688	-		CA264_15320	0.10	+1.3
3,584,710	+		CA264_15320	0.11	+0.9
3,584,713	+		CA264_15320	0.11	+0.4
3,584,713	+		CA264_15320	0.11	-0.2
3,584,713	+		CA264_15320	0.11	-0.4
3,584,714	-		CA264_15320	0.11	-0.2
3,584,714	-		CA264_15320	0.11	-0.8
3,584,741	+		CA264_15320	0.12	+0.0
3,584,742	-		CA264_15320	0.12	-1.0
3,584,759	-		CA264_15320	0.13	-0.3
3,584,759	-		CA264_15320	0.13	-0.5
3,584,763	-		CA264_15320	0.13	-0.2
3,584,787	-		CA264_15320	0.14	-0.7
3,584,800	+		CA264_15320	0.15	-0.6
3,584,807	+		CA264_15320	0.15	+0.5
3,584,807	+		CA264_15320	0.15	-0.5
3,584,808	-		CA264_15320	0.15	-1.2
3,584,808	-		CA264_15320	0.15	-0.0
3,584,836	+		CA264_15320	0.16	-0.5
3,584,840	+		CA264_15320	0.17	-0.2
3,584,841	-		CA264_15320	0.17	-0.4
3,584,841	-		CA264_15320	0.17	-0.6
3,584,841	-		CA264_15320	0.17	-0.0
3,584,848	+		CA264_15320	0.17	-0.4
3,584,849	-		CA264_15320	0.17	+0.0
3,584,851	+		CA264_15320	0.17	-0.1
3,584,851	+		CA264_15320	0.17	+0.7
3,584,851	+		CA264_15320	0.17	-0.1
3,584,852	-		CA264_15320	0.17	-1.6
3,584,914	+		CA264_15320	0.20	+0.3
3,584,918	+		CA264_15320	0.20	+0.2
3,584,938	-		CA264_15320	0.21	+0.0
3,584,938	-		CA264_15320	0.21	+1.6
3,584,977	+		CA264_15320	0.22	+0.2
3,584,977	+		CA264_15320	0.22	+0.4
3,585,001	-		CA264_15320	0.24	-0.2
3,585,027	+		CA264_15320	0.25	+0.4
3,585,048	-		CA264_15320	0.26	-0.2
3,585,055	-		CA264_15320	0.26	+0.2
3,585,055	-		CA264_15320	0.26	-1.4
3,585,055	-		CA264_15320	0.26	+1.3
3,585,076	+		CA264_15320	0.27	-0.5
3,585,076	+		CA264_15320	0.27	-0.8
3,585,076	+		CA264_15320	0.27	+0.2
3,585,080	-		CA264_15320	0.27	-0.2
3,585,100	+		CA264_15320	0.28	-0.5
3,585,100	+		CA264_15320	0.28	+0.1
3,585,101	-		CA264_15320	0.28	+0.7
3,585,101	-		CA264_15320	0.28	+0.3
3,585,101	-		CA264_15320	0.28	+0.3
3,585,107	+		CA264_15320	0.28	+0.6
3,585,127	+		CA264_15320	0.29	+0.5
3,585,127	+		CA264_15320	0.29	+0.6
3,585,128	-		CA264_15320	0.29	-0.2
3,585,132	+		CA264_15320	0.29	-0.3
3,585,132	+		CA264_15320	0.29	+0.2
3,585,132	+		CA264_15320	0.29	-0.2
3,585,132	+		CA264_15320	0.29	+0.8
3,585,150	+		CA264_15320	0.30	+0.0
3,585,162	+		CA264_15320	0.30	-0.0
3,585,163	-		CA264_15320	0.30	-0.1
3,585,163	-		CA264_15320	0.30	+0.4
3,585,192	+		CA264_15320	0.32	+0.4
3,585,223	-		CA264_15320	0.33	-0.8
3,585,223	-		CA264_15320	0.33	-0.3
3,585,228	+		CA264_15320	0.33	-0.3
3,585,232	+		CA264_15320	0.33	-0.4
3,585,233	-		CA264_15320	0.33	-0.4
3,585,291	+		CA264_15320	0.36	-0.2
3,585,292	-		CA264_15320	0.36	+0.2
3,585,356	+		CA264_15320	0.39	-2.0
3,585,356	+		CA264_15320	0.39	+0.4
3,585,357	-		CA264_15320	0.39	-0.8
3,585,361	-		CA264_15320	0.39	-1.8
3,585,361	-		CA264_15320	0.39	-0.1
3,585,361	-		CA264_15320	0.39	+0.1
3,585,365	+		CA264_15320	0.39	-0.2
3,585,403	+		CA264_15320	0.41	-0.4
3,585,404	-		CA264_15320	0.41	+0.3
3,585,405	+		CA264_15320	0.41	-0.4
3,585,405	+		CA264_15320	0.41	+0.8
3,585,405	+		CA264_15320	0.41	-0.6
3,585,406	-		CA264_15320	0.41	+0.4
3,585,406	-		CA264_15320	0.41	-0.8
3,585,440	-		CA264_15320	0.42	-0.5