Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_08700

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
2,018,682	+		CA264_08695	0.56	-0.3
2,018,794	+		CA264_08695	0.64	-0.5
2,018,795	-		CA264_08695	0.65	-1.5
2,018,797	+		CA264_08695	0.65	-1.5
2,018,797	+		CA264_08695	0.65	+0.2
2,018,798	-		CA264_08695	0.65	-2.0
2,018,803	+		CA264_08695	0.65	-0.4
2,018,804	-		CA264_08695	0.65	+1.1
2,018,831	-		CA264_08695	0.67	-1.7
2,018,856	+		CA264_08695	0.69	-0.4
2,018,856	+		CA264_08695	0.69	-0.8
2,018,856	+		CA264_08695	0.69	-1.3
2,018,857	-		CA264_08695	0.69	-2.5
2,018,857	-		CA264_08695	0.69	-0.4
2,018,857	-		CA264_08695	0.69	-1.6
2,018,857	-		CA264_08695	0.69	-0.9
2,018,857	-		CA264_08695	0.69	+0.3
2,018,857	-		CA264_08695	0.69	-2.2
2,018,859	-		CA264_08695	0.69	-0.3
2,018,860	+		CA264_08695	0.69	-1.4
2,018,860	+		CA264_08695	0.69	-0.6
2,018,860	+		CA264_08695	0.69	-0.5
2,018,860	+		CA264_08695	0.69	-0.7
2,018,861	-		CA264_08695	0.70	-1.3
2,018,861	-		CA264_08695	0.70	-2.0
2,018,861	-		CA264_08695	0.70	-0.3
2,018,861	-		CA264_08695	0.70	-1.0
2,018,861	-		CA264_08695	0.70	-3.1
2,018,861	-		CA264_08695	0.70	-1.3
2,018,863	+		CA264_08695	0.70	+0.0
2,018,863	+		CA264_08695	0.70	+0.7
2,018,864	-		CA264_08695	0.70	-2.0
2,018,865	+		CA264_08695	0.70	+0.1
2,018,866	-		CA264_08695	0.70	-0.7
2,018,899	+		CA264_08695	0.72	+0.3
2,018,983	+		CA264_08695	0.79	-1.3
2,019,017	+		CA264_08695	0.81	+0.0
2,019,028	+		CA264_08695	0.82	-0.3
2,019,029	-		CA264_08695	0.82	-0.6
2,019,029	-		CA264_08695	0.82	-1.3
2,019,035	+		CA264_08695	0.83	+1.2
2,019,071	+		CA264_08695	0.86	-1.5
2,019,115	+		CA264_08695	0.89	-0.2
2,019,236	+				-0.3
2,019,237	-				-0.5
2,019,283	+				-0.6
2,019,284	-				+0.2
2,019,334	+				+0.1
2,019,334	+				-1.0
2,019,334	+				-0.8
2,019,335	-				-2.7
2,019,342	+				-0.1
2,019,354	+				+0.5
2,019,354	+				-0.1
2,019,355	-				-0.7
2,019,357	-				-1.2
2,019,357	-				-1.3
2,019,383	+				-0.6
2,019,384	-				-1.6
2,019,417	-				-0.5
2,019,439	-				-0.0
2,019,460	+				-1.5
2,019,464	+				-1.3
2,019,465	-				-1.0
2,019,553	-				-0.7
2,019,591	-				-0.9
2,019,600	+				-0.1
2,019,600	+				+0.0
2,019,600	+				+0.0
2,019,601	-				-1.1
2,019,603	-				-0.8
2,019,610	+				+0.5
2,019,644	+				-0.2
2,019,744	-				-1.2
2,019,801	+				-0.5
2,019,801	+				-0.6
2,019,802	-				-2.5
2,019,836	-				-1.2
2,019,936	-				-1.5
2,019,962	+				-0.6
2,019,971	+				+0.5
2,019,971	+				-0.1
2,020,035	-		CA264_08700	0.12	-2.0
2,020,035	-		CA264_08700	0.12	-0.4
2,020,055	+		CA264_08700	0.12	-0.4
2,020,055	+		CA264_08700	0.12	-0.1
2,020,216	-		CA264_08700	0.17	-1.4
2,020,262	-		CA264_08700	0.19	-1.0
2,020,298	+		CA264_08700	0.20	-0.6
2,020,299	-		CA264_08700	0.20	-3.7
2,020,299	-		CA264_08700	0.20	+1.1
2,020,343	-		CA264_08700	0.21	-1.1
2,020,430	-		CA264_08700	0.24	+0.0
2,020,455	+		CA264_08700	0.25	+1.1
2,020,456	-		CA264_08700	0.25	-0.4
2,020,525	+		CA264_08700	0.27	+1.3
2,020,669	+		CA264_08700	0.32	+0.4
2,020,669	+		CA264_08700	0.32	-1.6
2,020,670	-		CA264_08700	0.32	+0.7
2,020,670	-		CA264_08700	0.32	-1.6
2,020,746	+		CA264_08700	0.34	-0.7
2,020,826	+		CA264_08700	0.36	-0.3
2,020,827	-		CA264_08700	0.36	-2.0
2,020,845	-		CA264_08700	0.37	-1.4
2,020,862	-		CA264_08700	0.38	-1.0
2,020,867	+		CA264_08700	0.38	-0.4
2,020,915	+		CA264_08700	0.39	-0.2
2,020,966	+		CA264_08700	0.41	+0.5
2,020,973	-		CA264_08700	0.41	-1.3
2,020,973	-		CA264_08700	0.41	+0.1
2,021,039	+		CA264_08700	0.43	+0.3
2,021,040	-		CA264_08700	0.43	+0.2
2,021,050	+		CA264_08700	0.43	-0.3
2,021,123	+		CA264_08700	0.46	+1.4
2,021,124	-		CA264_08700	0.46	-0.7
2,021,134	+		CA264_08700	0.46	-0.2
2,021,134	+		CA264_08700	0.46	-0.3
2,021,135	-		CA264_08700	0.46	-0.4
2,021,154	-		CA264_08700	0.47	-0.6
2,021,254	+		CA264_08700	0.50	+1.5
2,021,275	+		CA264_08700	0.50	-0.8
2,021,294	-		CA264_08700	0.51	-0.5
2,021,359	+		CA264_08700	0.53	-0.9
2,021,366	-		CA264_08700	0.53	-0.8
2,021,393	+		CA264_08700	0.54	+0.0
2,021,482	+		CA264_08700	0.57	-1.1
2,021,483	-		CA264_08700	0.57	-0.1
2,021,483	-		CA264_08700	0.57	-0.4
2,021,553	+		CA264_08700	0.59	+0.3
2,021,578	+		CA264_08700	0.60	-1.7
2,021,584	+		CA264_08700	0.60	+0.4
2,021,665	+		CA264_08700	0.62	-0.2
2,021,665	+		CA264_08700	0.62	+0.0
2,021,665	+		CA264_08700	0.62	-0.2
2,021,710	-		CA264_08700	0.64	-1.1
2,021,713	+		CA264_08700	0.64	+0.0
2,021,764	+		CA264_08700	0.65	-0.3
2,021,981	-		CA264_08700	0.72	+0.7
2,022,016	-		CA264_08700	0.73	-0.1
2,022,065	+		CA264_08700	0.75	-0.7
2,022,066	-		CA264_08700	0.75	+0.8
2,022,102	+		CA264_08700	0.76	-0.6
2,022,127	+		CA264_08700	0.77	+0.1
2,022,127	+		CA264_08700	0.77	-0.1
2,022,127	+		CA264_08700	0.77	-0.6
2,022,128	-		CA264_08700	0.77	-0.5
2,022,128	-		CA264_08700	0.77	-1.5
2,022,150	-		CA264_08700	0.77	-0.6
2,022,173	-		CA264_08700	0.78	+0.2
2,022,173	-		CA264_08700	0.78	-0.7
2,022,173	-		CA264_08700	0.78	+0.0
2,022,196	+		CA264_08700	0.79	-0.9
2,022,197	-		CA264_08700	0.79	+0.1
2,022,199	-		CA264_08700	0.79	-0.7
2,022,199	-		CA264_08700	0.79	-0.6
2,022,253	+		CA264_08700	0.81	-0.2
2,022,253	+		CA264_08700	0.81	-1.3
2,022,295	-		CA264_08700	0.82	+0.1
2,022,306	+		CA264_08700	0.82	+0.0
2,022,306	+		CA264_08700	0.82	+0.2
2,022,378	+		CA264_08700	0.85	-0.3
2,022,491	+		CA264_08700	0.88	-0.5
2,022,499	-		CA264_08700	0.88	+0.3
2,022,503	-		CA264_08700	0.88	+2.1
2,022,551	+		CA264_08700	0.90	-0.8
2,022,559	+				-0.0
2,022,559	+				+0.2
2,022,559	+				-0.7
2,022,560	-				+0.3
2,022,560	-				+0.4
2,022,607	+				-0.1
2,022,874	+				-0.5
2,022,875	-				-0.7
2,022,875	-				+0.4
2,022,875	-				-1.0
2,022,878	+				-0.2
2,022,879	-				+0.1
2,022,879	-				-0.1
2,022,916	-				+0.5
2,022,941	-				-0.4
2,022,941	-				-0.3
2,022,960	+				+0.0
2,022,961	-				+0.3
2,022,961	-				-1.9
2,023,091	+		CA264_08705	0.14	-0.4
2,023,092	-		CA264_08705	0.14	+0.1
2,023,110	-		CA264_08705	0.16	+0.6
2,023,111	+		CA264_08705	0.16	-0.8
2,023,112	-		CA264_08705	0.16	+0.1
2,023,121	+		CA264_08705	0.16	+0.1
2,023,133	+		CA264_08705	0.17	+0.3
2,023,133	+		CA264_08705	0.17	+0.7
2,023,134	-		CA264_08705	0.17	-0.5
2,023,136	-		CA264_08705	0.17	-0.0
2,023,139	+		CA264_08705	0.18	-1.0
2,023,139	+		CA264_08705	0.18	+0.5
2,023,140	-		CA264_08705	0.18	-0.4
2,023,140	-		CA264_08705	0.18	+0.2
2,023,142	+		CA264_08705	0.18	-1.2
2,023,142	+		CA264_08705	0.18	+0.3
2,023,142	+		CA264_08705	0.18	-0.4
2,023,143	-		CA264_08705	0.18	-0.8
2,023,143	-		CA264_08705	0.18	-0.5
2,023,144	+		CA264_08705	0.18	-0.5
2,023,145	-		CA264_08705	0.18	+0.2
2,023,213	-		CA264_08705	0.23	-0.0
2,023,250	+		CA264_08705	0.25	+0.6
2,023,293	-		CA264_08705	0.28	+0.3
2,023,334	+		CA264_08705	0.31	-1.5
2,023,334	+		CA264_08705	0.31	-0.5
2,023,335	-		CA264_08705	0.31	-1.2
2,023,335	-		CA264_08705	0.31	+0.0
2,023,335	-		CA264_08705	0.31	-0.0
2,023,355	+		CA264_08705	0.33	+0.3
2,023,356	-		CA264_08705	0.33	-0.2
2,023,356	-		CA264_08705	0.33	+0.1
2,023,426	+		CA264_08705	0.38	+0.3
2,023,427	-		CA264_08705	0.38	+0.5
2,023,427	-		CA264_08705	0.38	-0.5
2,023,447	+		CA264_08705	0.39	+0.8
2,023,448	-		CA264_08705	0.39	-0.6
2,023,468	+		CA264_08705	0.41	-0.5
2,023,469	-		CA264_08705	0.41	+0.7
2,023,568	-		CA264_08705	0.48	-0.5
2,023,620	-		CA264_08705	0.51	+0.1
2,023,658	+		CA264_08705	0.54	-0.7
2,023,685	+		CA264_08705	0.56	+0.0
2,023,686	-		CA264_08705	0.56	-0.3
2,023,732	+		CA264_08705	0.59	+0.4
2,023,749	-		CA264_08705	0.61	+0.7
2,023,804	+		CA264_08705	0.64	+0.1
2,023,819	+		CA264_08705	0.65	-0.7
2,023,819	+		CA264_08705	0.65	-0.5
2,023,820	-		CA264_08705	0.66	-2.0