Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05860

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,362,558	-		CA264_05850	0.82	-0.2
1,362,608	-		CA264_05850	0.89	-0.3
1,362,655	-				-0.0
1,362,704	-				+1.8
1,362,726	-				-0.3
1,362,726	-				+0.2
1,362,734	+				-0.1
1,362,734	+				-0.2
1,362,734	+				-0.4
1,362,734	+				+0.0
1,362,763	+				-0.7
1,362,803	+				-0.2
1,362,803	+				+0.4
1,362,803	+				+0.3
1,362,807	+				-0.2
1,362,813	+				+0.1
1,362,819	+				-0.8
1,362,820	-				+0.2
1,362,826	+				+2.1
1,362,827	-				+0.2
1,362,827	-				-0.5
1,362,827	-				+1.0
1,362,827	-				-0.1
1,362,828	+				+0.1
1,362,829	-				-0.1
1,362,918	+		CA264_05855	0.20	-1.3
1,362,974	+		CA264_05855	0.32	+0.1
1,362,974	+		CA264_05855	0.32	+0.2
1,362,975	-		CA264_05855	0.33	+1.5
1,363,061	-		CA264_05855	0.52	-0.1
1,363,061	-		CA264_05855	0.52	-0.6
1,363,106	+		CA264_05855	0.62	+0.4
1,363,107	-		CA264_05855	0.62	-0.3
1,363,112	-		CA264_05855	0.63	-0.2
1,363,112	-		CA264_05855	0.63	-0.9
1,363,147	-		CA264_05855	0.71	-0.3
1,363,147	-		CA264_05855	0.71	-0.3
1,363,245	+				-0.1
1,363,246	-				-0.6
1,363,246	-				+0.7
1,363,274	-				-0.4
1,363,283	+				-0.7
1,363,283	+				-0.0
1,363,283	+				+0.1
1,363,284	-				+0.2
1,363,284	-				+0.3
1,363,284	-				+0.9
1,363,285	+				-1.3
1,363,301	-				+0.4
1,363,306	-				+0.4
1,363,311	+				-0.5
1,363,359	-				+0.2
1,363,359	-				-0.5
1,363,428	+				-0.2
1,363,429	-				-0.0
1,363,450	+				-2.0
1,363,455	-				+0.2
1,363,480	+				+0.0
1,363,481	-				-0.2
1,363,511	+				+0.2
1,363,512	-				-0.3
1,363,512	-				-0.5
1,363,657	+				-0.0
1,363,657	+				+0.0
1,363,658	-				-0.9
1,363,658	-				-0.2
1,363,658	-				+0.1
1,363,768	+		CA264_05860	0.12	+0.2
1,363,807	+		CA264_05860	0.14	-0.1
1,363,867	-		CA264_05860	0.16	+0.1
1,363,933	-		CA264_05860	0.19	-0.2
1,363,969	-		CA264_05860	0.21	+0.3
1,363,969	-		CA264_05860	0.21	+0.1
1,364,011	+		CA264_05860	0.23	-0.7
1,364,012	-		CA264_05860	0.23	-0.4
1,364,032	+		CA264_05860	0.24	+0.5
1,364,032	+		CA264_05860	0.24	+0.3
1,364,033	-		CA264_05860	0.24	-0.6
1,364,033	-		CA264_05860	0.24	-1.1
1,364,033	-		CA264_05860	0.24	-0.4
1,364,038	+		CA264_05860	0.24	+0.3
1,364,050	+		CA264_05860	0.24	-0.5
1,364,050	+		CA264_05860	0.24	+0.1
1,364,051	-		CA264_05860	0.24	+0.1
1,364,053	+		CA264_05860	0.25	-0.1
1,364,054	-		CA264_05860	0.25	-0.2
1,364,054	-		CA264_05860	0.25	-0.3
1,364,059	+		CA264_05860	0.25	+0.5
1,364,059	+		CA264_05860	0.25	+0.5
1,364,059	+		CA264_05860	0.25	-0.3
1,364,059	+		CA264_05860	0.25	-0.8
1,364,059	+		CA264_05860	0.25	-0.0
1,364,059	+		CA264_05860	0.25	-0.4
1,364,060	-		CA264_05860	0.25	+1.4
1,364,093	+		CA264_05860	0.26	-1.3
1,364,093	+		CA264_05860	0.26	+0.8
1,364,118	+		CA264_05860	0.27	+0.4
1,364,118	+		CA264_05860	0.27	+0.8
1,364,119	-		CA264_05860	0.27	-1.0
1,364,218	+		CA264_05860	0.32	+0.3
1,364,239	+		CA264_05860	0.33	-0.2
1,364,295	+		CA264_05860	0.35	-0.4
1,364,296	-		CA264_05860	0.35	+0.9
1,364,337	-		CA264_05860	0.37	+1.0
1,364,362	+		CA264_05860	0.38	-0.2
1,364,363	-		CA264_05860	0.38	+0.0
1,364,363	-		CA264_05860	0.38	-0.0
1,364,448	-		CA264_05860	0.42	-0.7
1,364,448	-		CA264_05860	0.42	+0.7
1,364,455	-		CA264_05860	0.42	-0.1
1,364,470	+		CA264_05860	0.43	-1.0
1,364,471	-		CA264_05860	0.43	-1.0
1,364,488	+		CA264_05860	0.44	-0.1
1,364,489	-		CA264_05860	0.44	-0.1
1,364,612	-		CA264_05860	0.49	-1.0
1,364,612	-		CA264_05860	0.49	-0.5
1,364,644	+		CA264_05860	0.50	-0.3
1,364,681	-		CA264_05860	0.52	+0.1
1,364,833	+		CA264_05860	0.59	-0.8
1,364,834	-		CA264_05860	0.59	-0.5
1,364,881	+		CA264_05860	0.61	+0.3
1,364,882	-		CA264_05860	0.61	-0.1
1,364,894	+		CA264_05860	0.61	-0.2
1,364,894	+		CA264_05860	0.61	+0.5
1,364,894	+		CA264_05860	0.61	-0.4
1,364,894	+		CA264_05860	0.61	+0.1
1,364,895	-		CA264_05860	0.61	-0.0
1,364,922	+		CA264_05860	0.63	-0.5
1,364,923	-		CA264_05860	0.63	-0.1
1,364,923	-		CA264_05860	0.63	-0.3
1,364,941	+		CA264_05860	0.64	-1.0
1,364,943	+		CA264_05860	0.64	+0.1
1,364,944	-		CA264_05860	0.64	-0.4
1,364,963	-		CA264_05860	0.64	-0.4
1,364,963	-		CA264_05860	0.64	-0.1
1,365,011	+		CA264_05860	0.67	+0.1
1,365,012	-		CA264_05860	0.67	+1.1
1,365,097	+		CA264_05860	0.70	-0.1
1,365,101	-		CA264_05860	0.71	-0.3
1,365,114	-		CA264_05860	0.71	-0.5
1,365,121	-		CA264_05860	0.71	-0.2
1,365,124	+		CA264_05860	0.72	-0.1
1,365,125	-		CA264_05860	0.72	-0.2
1,365,126	+		CA264_05860	0.72	-0.5
1,365,127	-		CA264_05860	0.72	+0.2
1,365,167	-		CA264_05860	0.73	-0.9
1,365,269	+		CA264_05860	0.78	+0.4
1,365,285	+		CA264_05860	0.79	-0.1
1,365,285	+		CA264_05860	0.79	+0.8
1,365,285	+		CA264_05860	0.79	-0.1
1,365,290	-		CA264_05860	0.79	+0.2
1,365,290	-		CA264_05860	0.79	+0.4
1,365,292	+		CA264_05860	0.79	+1.3
1,365,346	+		CA264_05860	0.81	-0.5
1,365,377	-		CA264_05860	0.83	-0.1
1,365,377	-		CA264_05860	0.83	-0.3
1,365,377	-		CA264_05860	0.83	-0.3
1,365,435	-		CA264_05860	0.85	+0.6
1,365,551	-				-1.0
1,365,593	-				-1.5
1,365,593	-				+0.5
1,365,667	-				+0.1
1,365,769	+				+1.5
1,365,868	-				+0.1
1,365,880	+				+0.7
1,365,918	+				-0.3
1,365,919	-				-1.0
1,365,926	+				-1.2
1,365,932	+				+2.5
1,365,932	+				+0.3
1,365,960	-				+0.1
1,365,960	-				-0.5
1,365,968	-				+0.6
1,365,975	-				-0.4
1,366,121	-		CA264_05865	0.24	+0.3
1,366,135	+		CA264_05865	0.26	-1.1
1,366,155	+		CA264_05865	0.28	+0.1
1,366,156	-		CA264_05865	0.29	-0.2
1,366,156	-		CA264_05865	0.29	-0.1
1,366,242	+		CA264_05865	0.39	+0.1
1,366,242	+		CA264_05865	0.39	-0.6
1,366,242	+		CA264_05865	0.39	+0.4
1,366,243	-		CA264_05865	0.40	+1.3
1,366,244	+		CA264_05865	0.40	-0.1
1,366,320	+		CA264_05865	0.49	-1.6
1,366,320	+		CA264_05865	0.49	-1.6
1,366,321	-		CA264_05865	0.49	-0.5
1,366,427	-		CA264_05865	0.63	+0.5
1,366,568	-		CA264_05865	0.81	-0.3
1,366,644	-				-0.5
1,366,713	-				-0.4
1,366,713	-				+0.0
1,366,718	-				-0.3
1,366,753	+				-0.1
1,366,753	+				+0.4
1,366,754	-				-0.3
1,366,754	-				-1.5
1,366,755	+				-0.2
1,366,755	+				-0.9
1,366,755	+				+0.4
1,366,755	+				-0.6
1,366,756	-				-0.6
1,366,756	-				+0.2
1,366,765	+				-0.3
1,366,766	-				-0.1
1,366,769	+				-1.7
1,366,769	+				-0.1
1,366,769	+				-0.7
1,366,770	-				+1.3
1,366,770	-				-0.4
1,366,770	-				+1.1
1,366,770	-				+1.5