Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3754

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
4,474,947	+		Echvi_3752	0.86	-3.2
4,474,947	+		Echvi_3752	0.86	-0.3
4,474,947	+		Echvi_3752	0.86	+1.2
4,474,948	-		Echvi_3752	0.86	+2.1
4,474,948	-		Echvi_3752	0.86	-1.7
4,474,948	-		Echvi_3752	0.86	+0.2
4,475,044	+		Echvi_3752	0.89	-1.6
4,475,044	+		Echvi_3752	0.89	-0.4
4,475,044	+		Echvi_3752	0.89	-2.8
4,475,119	+				-0.6
4,475,161	+				+0.1
4,475,162	-				-1.6
4,475,214	+				-0.6
4,475,214	+				+0.5
4,475,306	+				+1.7
4,475,386	+				-0.3
4,475,387	-				+1.2
4,475,390	+				-0.1
4,475,390	+				-0.7
4,475,390	+				+0.9
4,475,391	-				+1.0
4,475,391	-				+0.3
4,475,400	+				+0.5
4,475,401	-				-1.1
4,475,408	-				+0.7
4,475,412	+				-0.7
4,475,413	-				+1.2
4,475,489	+				-2.5
4,475,501	-		Echvi_3753	0.14	-1.1
4,475,512	+		Echvi_3753	0.20	-0.1
4,475,517	+		Echvi_3753	0.23	+0.2
4,475,526	-		Echvi_3753	0.28	+0.2
4,475,583	-		Echvi_3753	0.60	+0.3
4,475,594	-		Echvi_3753	0.66	-0.0
4,475,594	-		Echvi_3753	0.66	+0.3
4,475,635	+		Echvi_3753	0.89	-0.9
4,475,680	+				-0.4
4,475,681	-				-1.6
4,475,764	+				-0.5
4,475,764	+				+0.5
4,475,765	-				-2.3
4,475,765	-				-2.3
4,475,765	-				-0.1
4,475,766	+				-0.1
4,475,766	+				-0.2
4,475,786	+				-0.3
4,475,787	-				-2.5
4,475,829	+				+0.7
4,475,829	+				-0.9
4,475,829	+				+0.3
4,475,830	-				-2.8
4,475,830	-				-1.0
4,476,007	+				+0.0
4,476,007	+				-0.0
4,476,018	-				+2.2
4,476,045	-				-0.9
4,476,047	+				+0.8
4,476,048	-				-0.3
4,476,248	+				+0.3
4,476,249	-				+1.1
4,476,514	-		Echvi_3754	0.14	-1.0
4,476,647	+		Echvi_3754	0.17	-0.1
4,476,649	+		Echvi_3754	0.17	+0.1
4,476,650	-		Echvi_3754	0.17	+1.6
4,476,843	+		Echvi_3754	0.22	+0.9
4,476,883	-		Echvi_3754	0.23	-0.6
4,476,898	-		Echvi_3754	0.23	-1.0
4,476,920	+		Echvi_3754	0.23	-0.1
4,476,946	+		Echvi_3754	0.24	+0.6
4,477,051	+		Echvi_3754	0.27	+0.6
4,477,094	+		Echvi_3754	0.28	+1.2
4,477,137	-		Echvi_3754	0.29	-0.7
4,477,150	+		Echvi_3754	0.29	+1.6
4,477,272	+		Echvi_3754	0.32	+0.1
4,477,273	-		Echvi_3754	0.32	+0.4
4,477,590	+		Echvi_3754	0.40	+0.2
4,477,590	+		Echvi_3754	0.40	+1.0
4,477,599	-		Echvi_3754	0.40	-1.1
4,477,716	-		Echvi_3754	0.43	-0.4
4,477,716	-		Echvi_3754	0.43	+0.7
4,477,716	-		Echvi_3754	0.43	+0.6
4,477,716	-		Echvi_3754	0.43	-0.2
4,477,739	+		Echvi_3754	0.43	+0.7
4,477,741	+		Echvi_3754	0.43	+0.8
4,477,741	+		Echvi_3754	0.43	-1.3
4,477,742	-		Echvi_3754	0.43	-0.8
4,477,742	-		Echvi_3754	0.43	-0.2
4,477,742	-		Echvi_3754	0.43	-1.3
4,477,742	-		Echvi_3754	0.43	-0.6
4,477,754	+		Echvi_3754	0.43	+0.4
4,477,803	-		Echvi_3754	0.45	+1.5
4,477,833	-		Echvi_3754	0.45	+1.2
4,477,863	+		Echvi_3754	0.46	+0.4
4,477,882	-		Echvi_3754	0.47	+2.4
4,477,948	-		Echvi_3754	0.48	+0.6
4,477,949	+		Echvi_3754	0.48	-0.1
4,477,950	-		Echvi_3754	0.48	-0.5
4,477,950	-		Echvi_3754	0.48	+0.9
4,477,950	-		Echvi_3754	0.48	+1.2
4,477,953	+		Echvi_3754	0.48	+0.0
4,477,954	-		Echvi_3754	0.48	-0.6
4,477,954	-		Echvi_3754	0.48	-1.2
4,477,964	+		Echvi_3754	0.48	+0.0
4,478,040	-		Echvi_3754	0.50	+0.3
4,478,208	-		Echvi_3754	0.54	+0.0
4,478,227	+		Echvi_3754	0.55	+1.0
4,478,256	-		Echvi_3754	0.56	-0.2
4,478,256	-		Echvi_3754	0.56	+0.0
4,478,256	-		Echvi_3754	0.56	-0.4
4,478,285	+		Echvi_3754	0.56	+1.2
4,478,286	-		Echvi_3754	0.56	-0.5
4,478,363	+		Echvi_3754	0.58	+0.6
4,478,384	+		Echvi_3754	0.59	+1.2
4,478,384	+		Echvi_3754	0.59	+0.6
4,478,385	-		Echvi_3754	0.59	-0.2
4,478,387	+		Echvi_3754	0.59	+0.6
4,478,484	+		Echvi_3754	0.61	+0.9
4,478,484	+		Echvi_3754	0.61	+0.6
4,478,484	+		Echvi_3754	0.61	-1.2
4,478,484	+		Echvi_3754	0.61	-0.8
4,478,485	-		Echvi_3754	0.61	-0.9
4,478,485	-		Echvi_3754	0.61	+0.4
4,478,485	-		Echvi_3754	0.61	+0.7
4,478,485	-		Echvi_3754	0.61	-0.7
4,478,490	+		Echvi_3754	0.61	+0.1
4,478,527	+		Echvi_3754	0.62	+1.8
4,478,528	-		Echvi_3754	0.62	+1.4
4,478,573	+		Echvi_3754	0.63	+0.3
4,478,597	-		Echvi_3754	0.64	+0.8
4,478,653	+		Echvi_3754	0.65	-0.2
4,478,653	+		Echvi_3754	0.65	+1.6
4,478,654	-		Echvi_3754	0.65	+0.1
4,478,710	+		Echvi_3754	0.66	-1.1
4,478,711	-		Echvi_3754	0.66	+0.4
4,478,711	-		Echvi_3754	0.66	+1.1
4,478,734	+		Echvi_3754	0.67	-0.9
4,478,734	+		Echvi_3754	0.67	+1.3
4,478,735	-		Echvi_3754	0.67	+0.5
4,478,735	-		Echvi_3754	0.67	-1.1
4,478,755	+		Echvi_3754	0.68	-0.9
4,478,756	-		Echvi_3754	0.68	+0.5
4,478,857	+		Echvi_3754	0.70	+1.1
4,478,857	+		Echvi_3754	0.70	-1.4
4,478,857	+		Echvi_3754	0.70	+0.1
4,478,858	-		Echvi_3754	0.70	+0.4
4,478,858	-		Echvi_3754	0.70	+1.4
4,478,858	-		Echvi_3754	0.70	+0.6
4,478,878	+		Echvi_3754	0.70	+1.1
4,478,882	-		Echvi_3754	0.71	+0.7
4,478,991	+		Echvi_3754	0.73	-0.3
4,478,991	+		Echvi_3754	0.73	-0.6
4,478,991	+		Echvi_3754	0.73	+0.2
4,478,991	+		Echvi_3754	0.73	-0.6
4,478,992	-		Echvi_3754	0.73	+0.7
4,478,992	-		Echvi_3754	0.73	+0.7
4,478,992	-		Echvi_3754	0.73	+0.9
4,479,022	+		Echvi_3754	0.74	+0.2
4,479,022	+		Echvi_3754	0.74	+2.0
4,479,023	-		Echvi_3754	0.74	+0.6
4,479,047	+		Echvi_3754	0.75	+2.3
4,479,047	+		Echvi_3754	0.75	+0.5
4,479,088	+		Echvi_3754	0.76	+0.7
4,479,088	+		Echvi_3754	0.76	+0.6
4,479,088	+		Echvi_3754	0.76	-0.9
4,479,088	+		Echvi_3754	0.76	-0.9
4,479,089	-		Echvi_3754	0.76	+0.4
4,479,139	+		Echvi_3754	0.77	+2.0
4,479,170	+		Echvi_3754	0.77	-2.4
4,479,191	+		Echvi_3754	0.78	-2.5
4,479,202	-		Echvi_3754	0.78	+2.7
4,479,202	-		Echvi_3754	0.78	-0.8
4,479,202	-		Echvi_3754	0.78	-0.2
4,479,255	-		Echvi_3754	0.80	+0.8
4,479,255	-		Echvi_3754	0.80	-0.3
4,479,298	+		Echvi_3754	0.81	-0.9
4,479,298	+		Echvi_3754	0.81	+0.4
4,479,390	-		Echvi_3754	0.83	+0.8
4,479,391	+		Echvi_3754	0.83	+0.1
4,479,391	+		Echvi_3754	0.83	-0.2
4,479,391	+		Echvi_3754	0.83	-0.2
4,479,391	+		Echvi_3754	0.83	-0.4
4,479,392	-		Echvi_3754	0.83	-0.7
4,479,392	-		Echvi_3754	0.83	+1.7
4,479,392	-		Echvi_3754	0.83	+0.9
4,479,392	-		Echvi_3754	0.83	+0.1
4,479,489	+		Echvi_3754	0.85	+1.7
4,479,489	+		Echvi_3754	0.85	+0.5
4,479,489	+		Echvi_3754	0.85	+0.5
4,479,490	-		Echvi_3754	0.85	+0.7
4,479,490	-		Echvi_3754	0.85	-0.4
4,479,490	-		Echvi_3754	0.85	+1.1
4,479,490	-		Echvi_3754	0.85	-2.2
4,479,490	-		Echvi_3754	0.85	-0.1
4,479,490	-		Echvi_3754	0.85	-1.8
4,479,533	-		Echvi_3754	0.86	+2.0
4,479,599	-		Echvi_3754	0.88	-0.4
4,479,603	-		Echvi_3754	0.88	-1.3
4,479,603	-		Echvi_3754	0.88	-1.1
4,479,603	-		Echvi_3754	0.88	-0.5
4,479,603	-		Echvi_3754	0.88	-0.5
4,479,655	+		Echvi_3754	0.89	-0.3
4,479,655	+		Echvi_3754	0.89	+0.7
4,479,669	+		Echvi_3754	0.89	-0.1
4,479,669	+		Echvi_3754	0.89	-2.9
4,479,670	-		Echvi_3754	0.89	+1.1
4,479,670	-		Echvi_3754	0.89	+1.5
4,479,671	+		Echvi_3754	0.90	+0.4
4,479,671	+		Echvi_3754	0.90	-0.6
4,479,672	-		Echvi_3754	0.90	-0.1
4,479,678	+		Echvi_3754	0.90	-1.5
4,479,679	-		Echvi_3754	0.90	-1.9
4,479,700	+				-0.3
4,479,700	+				+0.5
4,479,701	-				+1.2
4,479,742	+				+2.7
4,479,742	+				-0.2
4,479,742	+				-0.7
4,479,743	-				-0.5
4,479,743	-				-1.2
4,479,744	+				-0.4
4,479,744	+				-0.2
4,479,745	-				+1.9
4,479,745	-				+1.2
4,479,745	-				-0.7
4,479,745	-				-0.2
4,479,745	-				-0.0
4,479,880	+				+0.3
4,479,934	+				+0.4
4,479,934	+				-0.9
4,479,934	+				+0.1
4,479,935	-				-0.4
4,479,935	-				-0.3
4,479,935	-				+0.2
4,479,935	-				+0.4
4,479,935	-				-0.0
4,479,937	-				+0.6
4,479,950	+				+0.7
4,479,978	-				+0.6
4,480,035	+				+0.0
4,480,049	-				+1.7
4,480,062	-				-0.8
4,480,109	+				+0.9
4,480,109	+				-0.8
4,480,110	-				+1.3
4,480,110	-				-0.4
4,480,121	+				+1.2
4,480,135	+				+0.3
4,480,226	+				-0.9
4,480,227	-				+0.7
4,480,279	+				+0.4
4,480,288	+				-0.3
4,480,303	+				-1.3
4,480,303	+				-0.0
4,480,304	-				+0.3
4,480,347	-				+0.2
4,480,438	+				-0.6
4,480,439	-				+0.2
4,480,446	+				-2.2
4,480,580	+				-0.2
4,480,613	+				-1.3
4,480,613	+				-1.0
4,480,614	-				-0.9
4,480,626	-				-0.1
4,480,634	+				+0.9
4,480,635	-				-1.6
4,480,652	+				-2.6
4,480,652	+				+0.6
4,480,652	+				-0.6
4,480,653	-				+0.4
4,480,653	-				-1.1
4,480,653	-				-2.1
4,480,701	-				-1.1
4,480,810	-				-2.2
4,480,864	+		Echvi_3755	0.12	-1.2
4,480,867	+				-0.6
4,480,868	-		Echvi_3755	0.12	-1.2
4,481,024	-		Echvi_3755	0.20	-0.2
4,481,030	-		Echvi_3755	0.21	+0.2
4,481,063	-		Echvi_3755	0.22	-2.3
4,481,088	+		Echvi_3755	0.24	+0.4
4,481,089	-		Echvi_3755	0.24	+0.8