Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1472

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,685,941	+		Echvi_1471	0.12	-1.2
1,685,941	+		Echvi_1471	0.12	+0.7
1,685,942	-		Echvi_1471	0.12	+0.5
1,685,942	-		Echvi_1471	0.12	+1.0
1,685,942	-		Echvi_1471	0.12	+1.0
1,685,942	-		Echvi_1471	0.12	+0.5
1,685,982	+		Echvi_1471	0.17	+0.7
1,685,982	+		Echvi_1471	0.17	-0.9
1,685,982	+		Echvi_1471	0.17	+1.6
1,685,983	-		Echvi_1471	0.17	-0.8
1,685,983	-		Echvi_1471	0.17	+0.9
1,685,983	-		Echvi_1471	0.17	-0.3
1,685,999	+		Echvi_1471	0.18	+0.0
1,685,999	+		Echvi_1471	0.18	+0.3
1,685,999	+		Echvi_1471	0.18	-1.2
1,686,029	+		Echvi_1471	0.22	+1.0
1,686,181	+		Echvi_1471	0.39	+1.1
1,686,181	+		Echvi_1471	0.39	+3.1
1,686,219	+		Echvi_1471	0.44	-1.6
1,686,219	+		Echvi_1471	0.44	-0.7
1,686,236	+		Echvi_1471	0.46	-1.4
1,686,237	-		Echvi_1471	0.46	-0.2
1,686,238	+		Echvi_1471	0.46	-0.0
1,686,238	+		Echvi_1471	0.46	+1.0
1,686,239	-		Echvi_1471	0.46	+0.4
1,686,239	-		Echvi_1471	0.46	-0.8
1,686,307	-		Echvi_1471	0.54	+1.7
1,686,332	-		Echvi_1471	0.57	+0.3
1,686,332	-		Echvi_1471	0.57	-0.2
1,686,466	+		Echvi_1471	0.72	+0.4
1,686,466	+		Echvi_1471	0.72	+1.6
1,686,468	+		Echvi_1471	0.72	-1.1
1,686,469	-		Echvi_1471	0.72	+0.7
1,686,486	+		Echvi_1471	0.74	-1.0
1,686,486	+		Echvi_1471	0.74	-0.3
1,686,487	-		Echvi_1471	0.74	+0.7
1,686,487	-		Echvi_1471	0.74	+1.2
1,686,487	-		Echvi_1471	0.74	+2.1
1,686,487	-		Echvi_1471	0.74	+1.6
1,686,487	-		Echvi_1471	0.74	+1.7
1,686,542	+		Echvi_1471	0.80	-0.7
1,686,542	+		Echvi_1471	0.80	+0.5
1,686,542	+		Echvi_1471	0.80	-2.3
1,686,543	-		Echvi_1471	0.81	-0.4
1,686,543	-		Echvi_1471	0.81	+0.1
1,686,604	-		Echvi_1471	0.88	-0.5
1,686,604	-		Echvi_1471	0.88	+1.0
1,686,644	-				+0.1
1,686,712	+				+0.7
1,686,712	+				-3.2
1,686,713	-				-0.2
1,686,739	-				-0.6
1,686,740	+				+1.2
1,686,741	-				+0.6
1,686,741	-				+0.2
1,686,741	-				-0.6
1,686,741	-				-0.6
1,686,741	-				+1.8
1,686,741	-				+3.4
1,686,812	-				-0.8
1,686,815	-				-1.2
1,686,845	+				+0.6
1,686,860	+				-0.2
1,686,870	+				-1.1
1,686,890	+				-0.4
1,686,890	+				-1.3
1,686,890	+				-0.7
1,686,890	+				+0.4
1,686,930	+				+2.6
1,686,931	-				-0.1
1,686,931	-				-0.3
1,687,118	+		Echvi_1472	0.20	-0.6
1,687,180	+		Echvi_1472	0.26	-3.1
1,687,180	+		Echvi_1472	0.26	-4.1
1,687,181	-		Echvi_1472	0.26	-1.4
1,687,226	+		Echvi_1472	0.31	-2.7
1,687,227	-		Echvi_1472	0.31	-1.0
1,687,227	-		Echvi_1472	0.31	-1.9
1,687,228	+		Echvi_1472	0.31	-1.0
1,687,228	+		Echvi_1472	0.31	-2.5
1,687,228	+		Echvi_1472	0.31	-3.4
1,687,228	+		Echvi_1472	0.31	-1.7
1,687,229	-		Echvi_1472	0.31	-2.6
1,687,229	-		Echvi_1472	0.31	-0.0
1,687,229	-		Echvi_1472	0.31	-0.8
1,687,256	+		Echvi_1472	0.34	-0.6
1,687,261	+		Echvi_1472	0.34	-2.5
1,687,261	+		Echvi_1472	0.34	-2.1
1,687,262	-		Echvi_1472	0.34	-0.3
1,687,262	-		Echvi_1472	0.34	-0.0
1,687,361	+		Echvi_1472	0.44	-2.5
1,687,361	+		Echvi_1472	0.44	-1.2
1,687,462	-		Echvi_1472	0.54	-2.8
1,687,508	+		Echvi_1472	0.58	-3.1
1,687,508	+		Echvi_1472	0.58	-3.0
1,687,543	+		Echvi_1472	0.62	-2.2
1,687,566	+		Echvi_1472	0.64	-0.6
1,687,566	+		Echvi_1472	0.64	-2.6
1,687,566	+		Echvi_1472	0.64	-2.8
1,687,566	+		Echvi_1472	0.64	-1.1
1,687,566	+		Echvi_1472	0.64	-4.4
1,687,567	-		Echvi_1472	0.64	-1.8
1,687,640	-		Echvi_1472	0.71	-0.8
1,687,643	+		Echvi_1472	0.72	-2.1
1,687,643	+		Echvi_1472	0.72	-0.8
1,687,643	+		Echvi_1472	0.72	-3.2
1,687,644	-		Echvi_1472	0.72	-3.2
1,687,644	-		Echvi_1472	0.72	-4.2
1,687,644	-		Echvi_1472	0.72	-2.3
1,687,872	+				-1.8
1,687,894	+				-2.6
1,687,894	+				-2.5
1,687,935	+				-4.6
1,687,936	-				+0.5
1,687,954	+				-1.6
1,687,974	-				-0.6
1,688,023	+				+1.3
1,688,066	+				-0.1
1,688,066	+				-0.4
1,688,066	+				+0.7
1,688,067	-				+1.0
1,688,095	+				-0.5
1,688,140	+				+0.1
1,688,140	+				+1.8
1,688,140	+				-2.1
1,688,143	+				+0.2
1,688,143	+				-0.0
1,688,143	+				-0.1
1,688,143	+				-1.3
1,688,144	-				-1.1
1,688,149	+				-0.2
1,688,150	-				+1.6
1,688,152	+				-0.2
1,688,152	+				-0.8
1,688,153	-				-0.5
1,688,318	-		Echvi_1473	0.14	-0.0
1,688,330	+		Echvi_1473	0.15	+1.7
1,688,361	-		Echvi_1473	0.18	+1.1
1,688,361	-		Echvi_1473	0.18	-0.9
1,688,361	-		Echvi_1473	0.18	-0.9
1,688,361	-		Echvi_1473	0.18	+0.4
1,688,364	+		Echvi_1473	0.18	-2.3
1,688,364	+		Echvi_1473	0.18	-3.2
1,688,365	-		Echvi_1473	0.19	+2.3
1,688,447	-		Echvi_1473	0.26	-1.7
1,688,447	-		Echvi_1473	0.26	-1.9
1,688,447	-		Echvi_1473	0.26	-0.5
1,688,563	+		Echvi_1473	0.36	+0.7
1,688,564	-		Echvi_1473	0.36	+1.6
1,688,594	+		Echvi_1473	0.39	+0.4
1,688,595	-		Echvi_1473	0.39	-3.2
1,688,595	-		Echvi_1473	0.39	-0.8
1,688,595	-		Echvi_1473	0.39	-1.0
1,688,687	-		Echvi_1473	0.47	-0.3
1,688,815	+		Echvi_1473	0.58	+0.8
1,688,815	+		Echvi_1473	0.58	-0.3
1,688,815	+		Echvi_1473	0.58	+0.1
1,688,815	+		Echvi_1473	0.58	-1.0
1,688,816	-		Echvi_1473	0.58	+2.0
1,688,816	-		Echvi_1473	0.58	+0.9
1,688,816	-		Echvi_1473	0.58	-1.7
1,688,816	-		Echvi_1473	0.58	+0.9
1,688,816	-		Echvi_1473	0.58	+1.1
1,688,816	-		Echvi_1473	0.58	-0.2
1,688,827	-		Echvi_1473	0.59	-0.7
1,688,839	-		Echvi_1473	0.60	+1.0
1,688,839	-		Echvi_1473	0.60	+0.0