Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0590 and Echvi_0591 are separated by 6 nucleotides Echvi_0591 and Echvi_0592 are separated by 75 nucleotides Echvi_0592 and Echvi_0593 are separated by 91 nucleotides Echvi_0593 and Echvi_0594 are separated by 41 nucleotides
Echvi_0590: Echvi_0590 - DnaJ-class molecular chaperone with C-terminal Zn finger domain, at 668,095 to 669,210
_0590
Echvi_0591: Echvi_0591 - Molecular chaperone GrpE (heat shock protein), at 669,217 to 669,837
_0591
Echvi_0592: Echvi_0592 - Obg family GTPase CgtA, at 669,913 to 670,905
_0592
Echvi_0593: Echvi_0593 - Adenylate kinase and related kinases, at 670,997 to 671,569
_0593
Echvi_0594: Echvi_0594 - hypoxanthine phosphoribosyltransferase, at 671,611 to 672,192
_0594
Position (kb) 669
670
671 Strain fitness (log2 ratio) -2
-1
0
1
2 at 669.211 kb on - strand at 669.214 kb on - strand at 669.214 kb on - strand at 669.219 kb on - strand at 669.770 kb on - strand, within Echvi_0591 at 669.770 kb on - strand, within Echvi_0591 at 669.770 kb on - strand, within Echvi_0591 at 669.805 kb on - strand at 669.805 kb on - strand at 669.805 kb on - strand at 669.823 kb on - strand at 669.838 kb on - strand at 669.838 kb on - strand at 669.838 kb on - strand at 670.909 kb on - strand at 670.909 kb on - strand at 670.909 kb on - strand at 670.909 kb on - strand at 670.912 kb on - strand at 670.912 kb on - strand at 670.919 kb on - strand at 670.932 kb on - strand at 670.981 kb on - strand at 670.999 kb on - strand at 671.001 kb on + strand at 671.586 kb on - strand at 671.599 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.709 kb on - strand, within Echvi_0594 at 671.732 kb on - strand, within Echvi_0594 at 671.843 kb on - strand, within Echvi_0594 at 671.849 kb on - strand, within Echvi_0594 at 671.849 kb on - strand, within Echvi_0594 at 671.849 kb on - strand, within Echvi_0594 at 671.854 kb on - strand, within Echvi_0594 at 671.854 kb on - strand, within Echvi_0594
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 669,211 - -0.4 669,214 - -0.6 669,214 - +1.7 669,219 - -0.1 669,770 - Echvi_0591 0.89 -2.6 669,770 - Echvi_0591 0.89 +1.0 669,770 - Echvi_0591 0.89 -0.9 669,805 - +0.9 669,805 - -0.0 669,805 - +0.5 669,823 - +0.3 669,838 - -1.2 669,838 - +1.7 669,838 - -1.2 670,909 - +1.4 670,909 - +1.4 670,909 - +0.6 670,909 - +0.1 670,912 - -1.6 670,912 - +2.0 670,919 - +0.5 670,932 - -1.7 670,981 - +0.6 670,999 - -0.5 671,001 + +0.9 671,586 - -1.4 671,599 - +1.0 671,625 - -0.7 671,625 - +0.2 671,625 - +0.6 671,625 - +0.2 671,625 - -1.0 671,625 - -0.8 671,627 - -0.2 671,627 - -0.0 671,627 - +0.2 671,627 - -0.4 671,627 - -2.6 671,709 - Echvi_0594 0.17 +0.3 671,732 - Echvi_0594 0.21 +0.1 671,843 - Echvi_0594 0.40 +0.4 671,849 - Echvi_0594 0.41 +0.8 671,849 - Echvi_0594 0.41 +1.0 671,849 - Echvi_0594 0.41 +0.5 671,854 - Echvi_0594 0.42 -1.9 671,854 - Echvi_0594 0.42 +0.3
Or see this region's nucleotide sequence