Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_18110
Experiment: m.b. Ceftazidime 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Ceftazidime 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,210,997 | - | CA264_18100 | 0.86 | +0.5 | |
4,211,181 | + | -0.7 | |||
4,211,182 | - | -0.2 | |||
4,211,182 | - | -1.5 | |||
4,211,275 | + | -1.3 | |||
4,211,276 | - | -1.3 | |||
4,211,276 | - | +0.8 | |||
4,211,276 | - | -0.1 | |||
4,211,299 | - | -1.1 | |||
4,211,387 | + | +0.4 | |||
4,211,631 | + | CA264_18105 | 0.29 | +0.8 | |
4,211,647 | - | CA264_18105 | 0.33 | -0.6 | |
4,211,700 | + | CA264_18105 | 0.47 | -1.1 | |
4,211,702 | + | CA264_18105 | 0.48 | -0.2 | |
4,211,702 | + | CA264_18105 | 0.48 | -0.5 | |
4,211,703 | - | CA264_18105 | 0.48 | -0.1 | |
4,211,827 | + | CA264_18105 | 0.80 | -0.4 | |
4,211,849 | + | CA264_18105 | 0.86 | -0.4 | |
4,212,230 | + | CA264_18110 | 0.55 | -2.1 | |
4,212,332 | - | CA264_18110 | 0.79 | -0.3 | |
4,212,332 | - | CA264_18110 | 0.79 | -1.0 | |
4,212,376 | - | CA264_18110 | 0.90 | -0.6 | |
4,212,386 | - | -0.1 | |||
4,212,386 | - | +0.1 | |||
4,212,472 | - | -0.4 | |||
4,212,472 | - | -0.6 |
Or see this region's nucleotide sequence