Experiment: m.b. Ceftazidime 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14515 and CA264_14520 are separated by 842 nucleotides CA264_14520 and CA264_14525 are separated by 29 nucleotides CA264_14525 and CA264_14530 overlap by 4 nucleotides
CA264_14515: CA264_14515 - peptidase M23, at 3,405,732 to 3,406,967
_14515
CA264_14520: CA264_14520 - twin-arginine translocase TatA/TatE family subunit, at 3,407,810 to 3,408,022
_14520
CA264_14525: CA264_14525 - twin-arginine translocase TatA/TatE family subunit, at 3,408,052 to 3,408,270
_14525
CA264_14530: CA264_14530 - aspartyl/glutamyl-tRNA amidotransferase subunit A, at 3,408,267 to 3,409,703
_14530
Position (kb)
3407
3408
3409 Strain fitness (log2 ratio)
-2
-1
0
1 at 3406.875 kb on + strand at 3407.074 kb on - strand at 3407.180 kb on + strand at 3407.186 kb on + strand at 3407.186 kb on + strand at 3407.187 kb on - strand at 3407.187 kb on - strand at 3407.288 kb on + strand at 3407.289 kb on - strand at 3407.293 kb on - strand at 3407.293 kb on - strand at 3407.295 kb on - strand at 3407.298 kb on + strand at 3407.298 kb on + strand at 3407.299 kb on - strand at 3407.299 kb on - strand at 3407.299 kb on - strand at 3407.299 kb on - strand at 3407.299 kb on - strand at 3407.299 kb on - strand at 3407.299 kb on - strand at 3407.300 kb on + strand at 3407.300 kb on + strand at 3407.300 kb on + strand at 3407.301 kb on - strand at 3407.326 kb on - strand at 3407.326 kb on - strand at 3407.347 kb on + strand at 3407.368 kb on - strand at 3407.390 kb on + strand at 3407.390 kb on + strand at 3407.656 kb on + strand at 3407.669 kb on + strand at 3407.669 kb on + strand at 3407.670 kb on - strand at 3407.672 kb on - strand at 3407.672 kb on - strand at 3407.686 kb on + strand at 3407.740 kb on - strand at 3408.051 kb on + strand at 3408.055 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.001 mg/ml remove 3,406,875 + +0.6 3,407,074 - +0.0 3,407,180 + -0.1 3,407,186 + -0.0 3,407,186 + +1.0 3,407,187 - -0.1 3,407,187 - -0.5 3,407,288 + -0.2 3,407,289 - -0.6 3,407,293 - -0.5 3,407,293 - +0.2 3,407,295 - +0.0 3,407,298 + -1.8 3,407,298 + -0.5 3,407,299 - -0.0 3,407,299 - -0.1 3,407,299 - -1.2 3,407,299 - -0.4 3,407,299 - +0.0 3,407,299 - -0.3 3,407,299 - +0.4 3,407,300 + -1.8 3,407,300 + -0.9 3,407,300 + -0.2 3,407,301 - -0.3 3,407,326 - +0.0 3,407,326 - -0.7 3,407,347 + -0.9 3,407,368 - +0.2 3,407,390 + -0.0 3,407,390 + +0.6 3,407,656 + -0.8 3,407,669 + -0.0 3,407,669 + +0.7 3,407,670 - -2.2 3,407,672 - -0.1 3,407,672 - -1.2 3,407,686 + -0.2 3,407,740 - -1.0 3,408,051 + -1.1 3,408,055 + +1.4
Or see this region's nucleotide sequence