Experiment: m.b. Ceftazidime 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10320 and CA264_10325 are separated by 194 nucleotides CA264_10325 and CA264_10330 overlap by 13 nucleotides
CA264_10320: CA264_10320 - hypothetical protein, at 2,398,731 to 2,399,615
_10320
CA264_10325: CA264_10325 - plasmid mobilization relaxosome protein MobC, at 2,399,810 to 2,400,199
_10325
CA264_10330: CA264_10330 - hypothetical protein, at 2,400,187 to 2,401,440
_10330
Position (kb)
2399
2400
2401 Strain fitness (log2 ratio)
-2
-1
0
1 at 2398.849 kb on - strand, within CA264_10320 at 2398.862 kb on - strand, within CA264_10320 at 2398.914 kb on + strand, within CA264_10320 at 2398.915 kb on - strand, within CA264_10320 at 2399.060 kb on - strand, within CA264_10320 at 2399.139 kb on - strand, within CA264_10320 at 2399.171 kb on - strand, within CA264_10320 at 2399.181 kb on + strand, within CA264_10320 at 2399.238 kb on + strand, within CA264_10320 at 2399.239 kb on - strand, within CA264_10320 at 2399.455 kb on + strand, within CA264_10320 at 2399.455 kb on + strand, within CA264_10320 at 2399.455 kb on + strand, within CA264_10320 at 2399.455 kb on + strand, within CA264_10320 at 2399.455 kb on + strand, within CA264_10320 at 2399.456 kb on - strand, within CA264_10320 at 2399.456 kb on - strand, within CA264_10320 at 2399.456 kb on - strand, within CA264_10320 at 2399.457 kb on + strand, within CA264_10320 at 2399.458 kb on - strand, within CA264_10320 at 2399.464 kb on - strand, within CA264_10320 at 2399.617 kb on + strand at 2399.617 kb on + strand at 2399.617 kb on + strand at 2399.646 kb on - strand at 2399.651 kb on + strand at 2399.659 kb on - strand at 2399.773 kb on - strand at 2399.796 kb on + strand at 2399.796 kb on + strand at 2399.797 kb on - strand at 2399.797 kb on - strand at 2399.800 kb on + strand at 2399.800 kb on + strand at 2399.801 kb on - strand at 2399.801 kb on - strand at 2399.801 kb on - strand at 2399.801 kb on - strand at 2399.803 kb on + strand at 2399.804 kb on - strand at 2399.804 kb on - strand at 2399.825 kb on - strand at 2400.105 kb on + strand, within CA264_10325 at 2400.201 kb on + strand at 2400.232 kb on + strand at 2400.236 kb on - strand at 2400.289 kb on + strand at 2400.455 kb on - strand, within CA264_10330 at 2400.488 kb on - strand, within CA264_10330 at 2400.579 kb on + strand, within CA264_10330 at 2400.580 kb on - strand, within CA264_10330 at 2400.631 kb on + strand, within CA264_10330 at 2400.632 kb on - strand, within CA264_10330 at 2400.769 kb on + strand, within CA264_10330 at 2400.775 kb on + strand, within CA264_10330 at 2400.775 kb on + strand, within CA264_10330 at 2400.878 kb on - strand, within CA264_10330 at 2400.921 kb on - strand, within CA264_10330 at 2400.946 kb on + strand, within CA264_10330 at 2401.136 kb on - strand, within CA264_10330 at 2401.143 kb on - strand, within CA264_10330 at 2401.143 kb on - strand, within CA264_10330 at 2401.147 kb on + strand, within CA264_10330 at 2401.148 kb on - strand, within CA264_10330 at 2401.148 kb on - strand, within CA264_10330 at 2401.151 kb on + strand, within CA264_10330 at 2401.186 kb on - strand, within CA264_10330 at 2401.191 kb on - strand, within CA264_10330 at 2401.194 kb on + strand, within CA264_10330 at 2401.195 kb on - strand, within CA264_10330
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.001 mg/ml remove 2,398,849 - CA264_10320 0.13 -0.4 2,398,862 - CA264_10320 0.15 +0.3 2,398,914 + CA264_10320 0.21 -0.2 2,398,915 - CA264_10320 0.21 -0.1 2,399,060 - CA264_10320 0.37 +0.1 2,399,139 - CA264_10320 0.46 -0.4 2,399,171 - CA264_10320 0.50 +0.4 2,399,181 + CA264_10320 0.51 +0.9 2,399,238 + CA264_10320 0.57 -0.7 2,399,239 - CA264_10320 0.57 -0.9 2,399,455 + CA264_10320 0.82 -0.9 2,399,455 + CA264_10320 0.82 -0.4 2,399,455 + CA264_10320 0.82 +0.1 2,399,455 + CA264_10320 0.82 -0.2 2,399,455 + CA264_10320 0.82 +0.4 2,399,456 - CA264_10320 0.82 +0.6 2,399,456 - CA264_10320 0.82 -0.6 2,399,456 - CA264_10320 0.82 -0.1 2,399,457 + CA264_10320 0.82 -0.8 2,399,458 - CA264_10320 0.82 -0.1 2,399,464 - CA264_10320 0.83 -0.7 2,399,617 + -0.7 2,399,617 + +0.3 2,399,617 + -0.9 2,399,646 - +0.3 2,399,651 + -1.8 2,399,659 - -0.6 2,399,773 - -0.8 2,399,796 + -0.5 2,399,796 + -1.5 2,399,797 - -0.2 2,399,797 - -0.4 2,399,800 + -0.4 2,399,800 + -0.3 2,399,801 - -0.8 2,399,801 - +0.7 2,399,801 - -0.2 2,399,801 - +0.4 2,399,803 + +1.5 2,399,804 - +0.2 2,399,804 - +0.4 2,399,825 - -0.3 2,400,105 + CA264_10325 0.76 -0.3 2,400,201 + -0.4 2,400,232 + +0.0 2,400,236 - -0.4 2,400,289 + -0.6 2,400,455 - CA264_10330 0.21 -0.1 2,400,488 - CA264_10330 0.24 +1.1 2,400,579 + CA264_10330 0.31 -0.6 2,400,580 - CA264_10330 0.31 -0.8 2,400,631 + CA264_10330 0.35 +0.2 2,400,632 - CA264_10330 0.35 -0.3 2,400,769 + CA264_10330 0.46 -0.7 2,400,775 + CA264_10330 0.47 +0.1 2,400,775 + CA264_10330 0.47 +0.1 2,400,878 - CA264_10330 0.55 -0.4 2,400,921 - CA264_10330 0.59 -0.0 2,400,946 + CA264_10330 0.61 -0.2 2,401,136 - CA264_10330 0.76 +0.3 2,401,143 - CA264_10330 0.76 -0.3 2,401,143 - CA264_10330 0.76 +0.3 2,401,147 + CA264_10330 0.77 -0.3 2,401,148 - CA264_10330 0.77 +0.6 2,401,148 - CA264_10330 0.77 -0.6 2,401,151 + CA264_10330 0.77 -0.6 2,401,186 - CA264_10330 0.80 +0.7 2,401,191 - CA264_10330 0.80 +0.2 2,401,194 + CA264_10330 0.80 -0.9 2,401,195 - CA264_10330 0.80 +0.8
Or see this region's nucleotide sequence