Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07025

Experiment: m.b. Ceftazidime 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07010 and CA264_07015 overlap by 14 nucleotidesCA264_07015 and CA264_07020 are separated by 0 nucleotidesCA264_07020 and CA264_07025 are separated by 11 nucleotidesCA264_07025 and CA264_07030 are separated by 37 nucleotides CA264_07010: CA264_07010 - hypothetical protein, at 1,615,926 to 1,618,535 _07010 CA264_07015: CA264_07015 - hypothetical protein, at 1,618,522 to 1,618,893 _07015 CA264_07020: CA264_07020 - phosphatidylglycerophosphatase A, at 1,618,894 to 1,619,355 _07020 CA264_07025: CA264_07025 - inositol-3-phosphate synthase, at 1,619,367 to 1,620,695 _07025 CA264_07030: CA264_07030 - UDP-glucose 4-epimerase, at 1,620,733 to 1,621,725 _07030 Position (kb) 1619 1620 1621Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1618.501 kb on - strandat 1618.503 kb on - strandat 1618.507 kb on - strandat 1618.512 kb on - strandat 1618.512 kb on - strandat 1618.513 kb on + strandat 1618.513 kb on + strandat 1618.514 kb on - strandat 1618.514 kb on - strandat 1618.514 kb on - strandat 1618.515 kb on + strandat 1618.516 kb on - strandat 1618.516 kb on - strandat 1618.517 kb on + strandat 1618.518 kb on - strandat 1618.523 kb on + strandat 1618.523 kb on + strandat 1618.531 kb on + strandat 1618.531 kb on + strandat 1618.604 kb on + strand, within CA264_07015at 1618.604 kb on + strand, within CA264_07015at 1618.604 kb on + strand, within CA264_07015at 1618.605 kb on - strand, within CA264_07015at 1618.605 kb on - strand, within CA264_07015at 1618.608 kb on + strand, within CA264_07015at 1618.608 kb on + strand, within CA264_07015at 1618.608 kb on + strand, within CA264_07015at 1618.634 kb on + strand, within CA264_07015at 1618.682 kb on + strand, within CA264_07015at 1618.781 kb on - strand, within CA264_07015at 1618.796 kb on + strand, within CA264_07015at 1618.919 kb on - strandat 1618.919 kb on - strandat 1618.969 kb on + strand, within CA264_07020at 1618.969 kb on + strand, within CA264_07020at 1618.975 kb on + strand, within CA264_07020at 1619.005 kb on + strand, within CA264_07020at 1619.005 kb on + strand, within CA264_07020at 1619.007 kb on + strand, within CA264_07020at 1619.007 kb on + strand, within CA264_07020at 1619.047 kb on + strand, within CA264_07020at 1619.073 kb on + strand, within CA264_07020at 1619.073 kb on + strand, within CA264_07020at 1619.073 kb on + strand, within CA264_07020at 1619.074 kb on - strand, within CA264_07020at 1619.082 kb on + strand, within CA264_07020at 1619.182 kb on + strand, within CA264_07020at 1619.183 kb on - strand, within CA264_07020at 1619.255 kb on + strand, within CA264_07020at 1619.289 kb on + strand, within CA264_07020at 1619.305 kb on + strand, within CA264_07020at 1619.305 kb on + strand, within CA264_07020at 1619.306 kb on - strand, within CA264_07020at 1619.308 kb on - strand, within CA264_07020at 1619.308 kb on - strand, within CA264_07020at 1619.309 kb on + strandat 1619.310 kb on - strandat 1619.335 kb on + strandat 1619.349 kb on + strandat 1619.366 kb on - strandat 1619.366 kb on - strandat 1619.409 kb on + strandat 1619.419 kb on - strandat 1619.525 kb on - strand, within CA264_07025at 1619.527 kb on + strand, within CA264_07025at 1619.606 kb on + strand, within CA264_07025at 1619.607 kb on - strand, within CA264_07025at 1619.621 kb on + strand, within CA264_07025at 1619.667 kb on + strand, within CA264_07025at 1619.668 kb on - strand, within CA264_07025at 1619.725 kb on + strand, within CA264_07025at 1619.761 kb on + strand, within CA264_07025at 1619.762 kb on - strand, within CA264_07025at 1619.762 kb on - strand, within CA264_07025at 1619.882 kb on + strand, within CA264_07025at 1619.883 kb on - strand, within CA264_07025at 1619.883 kb on - strand, within CA264_07025at 1619.985 kb on - strand, within CA264_07025at 1620.091 kb on + strand, within CA264_07025at 1620.091 kb on + strand, within CA264_07025at 1620.181 kb on + strand, within CA264_07025at 1620.191 kb on + strand, within CA264_07025at 1620.280 kb on + strand, within CA264_07025at 1620.280 kb on + strand, within CA264_07025at 1620.281 kb on - strand, within CA264_07025at 1620.281 kb on - strand, within CA264_07025at 1620.284 kb on + strand, within CA264_07025at 1620.284 kb on + strand, within CA264_07025at 1620.284 kb on + strand, within CA264_07025at 1620.328 kb on + strand, within CA264_07025at 1620.328 kb on + strand, within CA264_07025at 1620.329 kb on - strand, within CA264_07025at 1620.434 kb on - strand, within CA264_07025at 1620.434 kb on - strand, within CA264_07025at 1620.615 kb on + strandat 1620.616 kb on - strandat 1620.682 kb on - strandat 1620.689 kb on - strandat 1620.724 kb on - strandat 1620.745 kb on - strandat 1620.763 kb on + strandat 1620.986 kb on - strand, within CA264_07030at 1621.025 kb on + strand, within CA264_07030at 1621.049 kb on + strand, within CA264_07030at 1621.050 kb on - strand, within CA264_07030at 1621.050 kb on - strand, within CA264_07030at 1621.050 kb on - strand, within CA264_07030at 1621.113 kb on - strand, within CA264_07030at 1621.149 kb on - strand, within CA264_07030at 1621.149 kb on - strand, within CA264_07030at 1621.149 kb on - strand, within CA264_07030at 1621.186 kb on - strand, within CA264_07030at 1621.211 kb on + strand, within CA264_07030at 1621.265 kb on + strand, within CA264_07030at 1621.266 kb on - strand, within CA264_07030at 1621.296 kb on - strand, within CA264_07030at 1621.331 kb on - strand, within CA264_07030at 1621.332 kb on + strand, within CA264_07030at 1621.406 kb on - strand, within CA264_07030at 1621.514 kb on + strand, within CA264_07030at 1621.520 kb on + strand, within CA264_07030at 1621.543 kb on + strand, within CA264_07030at 1621.579 kb on - strand, within CA264_07030at 1621.580 kb on + strand, within CA264_07030at 1621.581 kb on - strand, within CA264_07030at 1621.581 kb on - strand, within CA264_07030at 1621.585 kb on + strand, within CA264_07030at 1621.586 kb on - strand, within CA264_07030at 1621.637 kb on + strandat 1621.639 kb on + strandat 1621.639 kb on + strandat 1621.640 kb on - strandat 1621.648 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.001 mg/ml
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1,618,501 - -0.3
1,618,503 - -0.5
1,618,507 - -0.0
1,618,512 - +0.4
1,618,512 - +0.8
1,618,513 + -0.3
1,618,513 + -0.0
1,618,514 - +1.1
1,618,514 - +0.0
1,618,514 - -0.1
1,618,515 + -0.1
1,618,516 - -0.3
1,618,516 - -0.0
1,618,517 + +0.1
1,618,518 - -0.4
1,618,523 + -0.5
1,618,523 + +0.2
1,618,531 + -1.2
1,618,531 + -0.6
1,618,604 + CA264_07015 0.22 -0.1
1,618,604 + CA264_07015 0.22 +0.8
1,618,604 + CA264_07015 0.22 -1.9
1,618,605 - CA264_07015 0.22 -1.0
1,618,605 - CA264_07015 0.22 -2.8
1,618,608 + CA264_07015 0.23 -0.8
1,618,608 + CA264_07015 0.23 -1.1
1,618,608 + CA264_07015 0.23 -1.0
1,618,634 + CA264_07015 0.30 -0.6
1,618,682 + CA264_07015 0.43 -1.5
1,618,781 - CA264_07015 0.70 -2.1
1,618,796 + CA264_07015 0.74 -0.5
1,618,919 - -0.3
1,618,919 - -1.2
1,618,969 + CA264_07020 0.16 -0.3
1,618,969 + CA264_07020 0.16 -0.6
1,618,975 + CA264_07020 0.18 +0.0
1,619,005 + CA264_07020 0.24 -0.7
1,619,005 + CA264_07020 0.24 -0.1
1,619,007 + CA264_07020 0.24 -1.2
1,619,007 + CA264_07020 0.24 +0.7
1,619,047 + CA264_07020 0.33 -0.3
1,619,073 + CA264_07020 0.39 -0.5
1,619,073 + CA264_07020 0.39 -0.1
1,619,073 + CA264_07020 0.39 -0.8
1,619,074 - CA264_07020 0.39 -3.7
1,619,082 + CA264_07020 0.41 -0.6
1,619,182 + CA264_07020 0.62 -0.7
1,619,183 - CA264_07020 0.63 -2.3
1,619,255 + CA264_07020 0.78 -0.5
1,619,289 + CA264_07020 0.85 -0.7
1,619,305 + CA264_07020 0.89 +0.3
1,619,305 + CA264_07020 0.89 -0.5
1,619,306 - CA264_07020 0.89 -1.3
1,619,308 - CA264_07020 0.90 -0.7
1,619,308 - CA264_07020 0.90 -3.0
1,619,309 + -0.9
1,619,310 - -1.3
1,619,335 + -0.8
1,619,349 + -0.5
1,619,366 - -0.4
1,619,366 - -1.1
1,619,409 + -0.8
1,619,419 - -1.1
1,619,525 - CA264_07025 0.12 -1.3
1,619,527 + CA264_07025 0.12 -1.1
1,619,606 + CA264_07025 0.18 -0.9
1,619,607 - CA264_07025 0.18 -0.3
1,619,621 + CA264_07025 0.19 -0.4
1,619,667 + CA264_07025 0.23 +0.0
1,619,668 - CA264_07025 0.23 +0.0
1,619,725 + CA264_07025 0.27 -1.3
1,619,761 + CA264_07025 0.30 -0.7
1,619,762 - CA264_07025 0.30 -1.6
1,619,762 - CA264_07025 0.30 -1.4
1,619,882 + CA264_07025 0.39 -1.0
1,619,883 - CA264_07025 0.39 +0.4
1,619,883 - CA264_07025 0.39 -0.7
1,619,985 - CA264_07025 0.47 -1.3
1,620,091 + CA264_07025 0.54 -2.3
1,620,091 + CA264_07025 0.54 -0.6
1,620,181 + CA264_07025 0.61 -0.1
1,620,191 + CA264_07025 0.62 -0.1
1,620,280 + CA264_07025 0.69 -0.1
1,620,280 + CA264_07025 0.69 +0.8
1,620,281 - CA264_07025 0.69 -0.2
1,620,281 - CA264_07025 0.69 -1.0
1,620,284 + CA264_07025 0.69 -0.7
1,620,284 + CA264_07025 0.69 -0.7
1,620,284 + CA264_07025 0.69 -1.6
1,620,328 + CA264_07025 0.72 -0.8
1,620,328 + CA264_07025 0.72 -2.4
1,620,329 - CA264_07025 0.72 -0.8
1,620,434 - CA264_07025 0.80 -1.0
1,620,434 - CA264_07025 0.80 -0.1
1,620,615 + -0.3
1,620,616 - -0.2
1,620,682 - -1.0
1,620,689 - -1.6
1,620,724 - -0.7
1,620,745 - -1.4
1,620,763 + -2.5
1,620,986 - CA264_07030 0.25 -1.8
1,621,025 + CA264_07030 0.29 -2.8
1,621,049 + CA264_07030 0.32 -1.1
1,621,050 - CA264_07030 0.32 -2.0
1,621,050 - CA264_07030 0.32 -1.8
1,621,050 - CA264_07030 0.32 -2.1
1,621,113 - CA264_07030 0.38 -2.0
1,621,149 - CA264_07030 0.42 -1.3
1,621,149 - CA264_07030 0.42 -2.7
1,621,149 - CA264_07030 0.42 -1.1
1,621,186 - CA264_07030 0.46 -2.9
1,621,211 + CA264_07030 0.48 -1.4
1,621,265 + CA264_07030 0.54 -1.4
1,621,266 - CA264_07030 0.54 -1.6
1,621,296 - CA264_07030 0.57 -3.8
1,621,331 - CA264_07030 0.60 -2.8
1,621,332 + CA264_07030 0.60 -0.6
1,621,406 - CA264_07030 0.68 -2.9
1,621,514 + CA264_07030 0.79 -1.4
1,621,520 + CA264_07030 0.79 -0.7
1,621,543 + CA264_07030 0.82 -1.6
1,621,579 - CA264_07030 0.85 -0.4
1,621,580 + CA264_07030 0.85 -2.1
1,621,581 - CA264_07030 0.85 -2.2
1,621,581 - CA264_07030 0.85 -1.2
1,621,585 + CA264_07030 0.86 -1.0
1,621,586 - CA264_07030 0.86 -1.7
1,621,637 + -1.2
1,621,639 + -1.9
1,621,639 + -1.9
1,621,640 - -3.1
1,621,648 - -2.1

Or see this region's nucleotide sequence