Experiment: m.b. Ceftazidime 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03755 and CA264_03760 are separated by 579 nucleotides CA264_03760 and CA264_03765 are separated by 91 nucleotides CA264_03765 and CA264_03770 are separated by 178 nucleotides
CA264_03755: CA264_03755 - hypothetical protein, at 880,636 to 882,687
_03755
CA264_03760: CA264_03760 - hypothetical protein, at 883,267 to 883,659
_03760
CA264_03765: CA264_03765 - tRNA-Glu, at 883,751 to 883,825
_03765
CA264_03770: CA264_03770 - type I glyceraldehyde-3-phosphate dehydrogenase, at 884,004 to 884,996
_03770
Position (kb) 883
884 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 882.297 kb on + strand, within CA264_03755 at 882.297 kb on + strand, within CA264_03755 at 882.312 kb on + strand, within CA264_03755 at 882.312 kb on + strand, within CA264_03755 at 882.312 kb on + strand, within CA264_03755 at 882.313 kb on - strand, within CA264_03755 at 882.344 kb on - strand, within CA264_03755 at 882.356 kb on + strand, within CA264_03755 at 882.357 kb on - strand, within CA264_03755 at 882.437 kb on - strand, within CA264_03755 at 882.460 kb on - strand, within CA264_03755 at 882.475 kb on + strand, within CA264_03755 at 882.476 kb on - strand, within CA264_03755 at 882.521 kb on - strand at 882.547 kb on + strand at 882.547 kb on + strand at 882.548 kb on - strand at 882.553 kb on - strand at 882.672 kb on + strand at 882.673 kb on - strand at 882.705 kb on - strand at 882.721 kb on + strand at 882.725 kb on + strand at 882.725 kb on + strand at 882.725 kb on + strand at 882.725 kb on + strand at 882.726 kb on - strand at 882.776 kb on + strand at 882.779 kb on + strand at 882.781 kb on + strand at 882.781 kb on + strand at 882.824 kb on + strand at 882.848 kb on + strand at 882.855 kb on + strand at 882.917 kb on + strand at 882.936 kb on + strand at 882.943 kb on - strand at 883.021 kb on - strand at 883.024 kb on + strand at 883.044 kb on + strand at 883.045 kb on - strand at 883.045 kb on - strand at 883.045 kb on - strand at 883.048 kb on + strand at 883.105 kb on - strand at 883.107 kb on - strand at 883.169 kb on + strand at 883.210 kb on + strand at 883.261 kb on + strand at 883.261 kb on + strand at 883.294 kb on + strand at 883.294 kb on + strand at 883.296 kb on + strand at 883.302 kb on + strand at 883.323 kb on + strand, within CA264_03760 at 883.343 kb on + strand, within CA264_03760 at 883.343 kb on + strand, within CA264_03760 at 883.344 kb on - strand, within CA264_03760 at 883.372 kb on + strand, within CA264_03760 at 883.372 kb on + strand, within CA264_03760 at 883.373 kb on - strand, within CA264_03760 at 883.394 kb on - strand, within CA264_03760 at 883.409 kb on + strand, within CA264_03760 at 883.410 kb on - strand, within CA264_03760 at 883.410 kb on - strand, within CA264_03760 at 883.414 kb on + strand, within CA264_03760 at 883.439 kb on - strand, within CA264_03760 at 883.516 kb on - strand, within CA264_03760 at 883.517 kb on + strand, within CA264_03760 at 883.517 kb on + strand, within CA264_03760 at 883.517 kb on + strand, within CA264_03760 at 883.517 kb on + strand, within CA264_03760 at 883.518 kb on - strand, within CA264_03760 at 883.564 kb on - strand, within CA264_03760 at 883.589 kb on - strand, within CA264_03760 at 883.658 kb on - strand at 883.665 kb on - strand at 883.672 kb on - strand at 883.672 kb on - strand at 883.888 kb on + strand at 883.912 kb on + strand at 883.951 kb on + strand at 883.952 kb on - strand at 883.956 kb on + strand at 883.956 kb on + strand at 883.957 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.001 mg/ml remove 882,297 + CA264_03755 0.81 -1.6 882,297 + CA264_03755 0.81 +0.7 882,312 + CA264_03755 0.82 -0.2 882,312 + CA264_03755 0.82 -1.2 882,312 + CA264_03755 0.82 -0.0 882,313 - CA264_03755 0.82 -0.6 882,344 - CA264_03755 0.83 -0.3 882,356 + CA264_03755 0.84 -0.6 882,357 - CA264_03755 0.84 -0.8 882,437 - CA264_03755 0.88 -0.1 882,460 - CA264_03755 0.89 +0.0 882,475 + CA264_03755 0.90 -0.2 882,476 - CA264_03755 0.90 -1.5 882,521 - -0.4 882,547 + -0.6 882,547 + -2.6 882,548 - +0.0 882,553 - -0.1 882,672 + -0.0 882,673 - -0.4 882,705 - -0.3 882,721 + -0.8 882,725 + -0.7 882,725 + -1.3 882,725 + -0.1 882,725 + -0.7 882,726 - -4.3 882,776 + -4.6 882,779 + -3.0 882,781 + -2.1 882,781 + -2.5 882,824 + -2.6 882,848 + -2.9 882,855 + -1.2 882,917 + -2.9 882,936 + -0.4 882,943 - -3.3 883,021 - -2.2 883,024 + -3.7 883,044 + -1.5 883,045 - -3.5 883,045 - -3.4 883,045 - -1.1 883,048 + -2.4 883,105 - -3.6 883,107 - -4.5 883,169 + -1.2 883,210 + -3.2 883,261 + -1.0 883,261 + -1.5 883,294 + -1.7 883,294 + -3.5 883,296 + -2.0 883,302 + -2.4 883,323 + CA264_03760 0.14 -4.7 883,343 + CA264_03760 0.19 -1.0 883,343 + CA264_03760 0.19 -1.6 883,344 - CA264_03760 0.20 -3.9 883,372 + CA264_03760 0.27 -1.1 883,372 + CA264_03760 0.27 -2.6 883,373 - CA264_03760 0.27 -2.8 883,394 - CA264_03760 0.32 -1.9 883,409 + CA264_03760 0.36 -0.9 883,410 - CA264_03760 0.36 -3.8 883,410 - CA264_03760 0.36 -1.1 883,414 + CA264_03760 0.37 -1.0 883,439 - CA264_03760 0.44 -2.5 883,516 - CA264_03760 0.63 -4.2 883,517 + CA264_03760 0.64 -1.3 883,517 + CA264_03760 0.64 -2.3 883,517 + CA264_03760 0.64 -1.0 883,517 + CA264_03760 0.64 -1.3 883,518 - CA264_03760 0.64 -4.0 883,564 - CA264_03760 0.76 -4.7 883,589 - CA264_03760 0.82 -2.1 883,658 - -4.8 883,665 - -2.2 883,672 - -2.8 883,672 - -2.3 883,888 + +0.2 883,912 + +0.1 883,951 + -1.8 883,952 - +0.2 883,956 + +0.4 883,956 + -0.8 883,957 - -0.2
Or see this region's nucleotide sequence