Experiment: m.b. Ceftazidime 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01660 and CA264_01665 are separated by 94 nucleotides CA264_01665 and CA264_01670 are separated by 437 nucleotides
CA264_01660: CA264_01660 - hypothetical protein, at 390,299 to 390,979
_01660
CA264_01665: CA264_01665 - phenylalanine 4-monooxygenase, at 391,074 to 391,817
_01665
CA264_01670: CA264_01670 - ABC transporter, at 392,255 to 394,132
_01670
Position (kb) 391
392 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 390.208 kb on + strand at 390.213 kb on - strand at 390.213 kb on - strand at 390.229 kb on + strand at 390.234 kb on + strand at 390.272 kb on - strand at 390.272 kb on - strand at 390.319 kb on + strand at 390.319 kb on + strand at 390.319 kb on + strand at 390.394 kb on + strand, within CA264_01660 at 390.394 kb on + strand, within CA264_01660 at 390.394 kb on + strand, within CA264_01660 at 390.395 kb on - strand, within CA264_01660 at 390.403 kb on + strand, within CA264_01660 at 390.483 kb on + strand, within CA264_01660 at 390.483 kb on + strand, within CA264_01660 at 390.569 kb on + strand, within CA264_01660 at 390.595 kb on - strand, within CA264_01660 at 390.595 kb on - strand, within CA264_01660 at 390.595 kb on - strand, within CA264_01660 at 390.628 kb on + strand, within CA264_01660 at 390.639 kb on - strand, within CA264_01660 at 390.665 kb on + strand, within CA264_01660 at 390.690 kb on - strand, within CA264_01660 at 390.884 kb on - strand, within CA264_01660 at 391.076 kb on - strand at 391.144 kb on - strand at 391.199 kb on - strand, within CA264_01665 at 391.199 kb on - strand, within CA264_01665 at 391.199 kb on - strand, within CA264_01665 at 391.725 kb on - strand, within CA264_01665 at 391.725 kb on - strand, within CA264_01665 at 391.767 kb on + strand at 391.768 kb on - strand at 391.768 kb on - strand at 391.790 kb on - strand at 391.818 kb on - strand at 391.818 kb on - strand at 391.834 kb on - strand at 391.959 kb on + strand at 391.960 kb on - strand at 391.975 kb on - strand at 391.983 kb on + strand at 391.986 kb on + strand at 391.987 kb on - strand at 391.987 kb on - strand at 391.995 kb on + strand at 391.999 kb on - strand at 392.003 kb on - strand at 392.004 kb on + strand at 392.004 kb on + strand at 392.005 kb on - strand at 392.025 kb on + strand at 392.032 kb on + strand at 392.034 kb on + strand at 392.035 kb on - strand at 392.035 kb on - strand at 392.035 kb on - strand at 392.250 kb on + strand at 392.257 kb on - strand at 392.439 kb on + strand at 392.456 kb on - strand, within CA264_01670 at 392.541 kb on - strand, within CA264_01670 at 392.580 kb on + strand, within CA264_01670 at 392.637 kb on - strand, within CA264_01670 at 392.651 kb on - strand, within CA264_01670 at 392.715 kb on - strand, within CA264_01670 at 392.725 kb on + strand, within CA264_01670 at 392.726 kb on - strand, within CA264_01670 at 392.786 kb on + strand, within CA264_01670
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.001 mg/ml remove 390,208 + -1.1 390,213 - +0.1 390,213 - -0.6 390,229 + -0.6 390,234 + -0.0 390,272 - -0.2 390,272 - -1.1 390,319 + -0.1 390,319 + +0.8 390,319 + +0.7 390,394 + CA264_01660 0.14 -0.7 390,394 + CA264_01660 0.14 +1.5 390,394 + CA264_01660 0.14 +0.1 390,395 - CA264_01660 0.14 +1.1 390,403 + CA264_01660 0.15 +1.1 390,483 + CA264_01660 0.27 -0.2 390,483 + CA264_01660 0.27 -1.0 390,569 + CA264_01660 0.40 -0.3 390,595 - CA264_01660 0.43 -0.2 390,595 - CA264_01660 0.43 -1.4 390,595 - CA264_01660 0.43 -0.3 390,628 + CA264_01660 0.48 -0.1 390,639 - CA264_01660 0.50 -0.2 390,665 + CA264_01660 0.54 -0.3 390,690 - CA264_01660 0.57 +0.1 390,884 - CA264_01660 0.86 -0.5 391,076 - -0.1 391,144 - -1.3 391,199 - CA264_01665 0.17 -1.3 391,199 - CA264_01665 0.17 -2.7 391,199 - CA264_01665 0.17 -3.3 391,725 - CA264_01665 0.88 -0.0 391,725 - CA264_01665 0.88 -1.7 391,767 + -1.1 391,768 - -1.7 391,768 - -0.9 391,790 - -0.8 391,818 - -2.1 391,818 - -1.3 391,834 - +0.1 391,959 + -0.6 391,960 - -1.7 391,975 - +0.4 391,983 + -0.2 391,986 + -1.0 391,987 - +0.8 391,987 - -0.0 391,995 + -0.0 391,999 - +0.0 392,003 - -0.4 392,004 + -0.4 392,004 + -0.9 392,005 - -0.1 392,025 + -0.9 392,032 + -1.1 392,034 + +1.1 392,035 - -0.5 392,035 - -0.4 392,035 - -0.1 392,250 + +1.1 392,257 - -0.0 392,439 + +0.3 392,456 - CA264_01670 0.11 -0.0 392,541 - CA264_01670 0.15 +1.3 392,580 + CA264_01670 0.17 +1.0 392,637 - CA264_01670 0.20 -0.3 392,651 - CA264_01670 0.21 -0.0 392,715 - CA264_01670 0.24 -0.4 392,725 + CA264_01670 0.25 -0.4 392,726 - CA264_01670 0.25 -0.2 392,786 + CA264_01670 0.28 -0.9
Or see this region's nucleotide sequence