Experiment: m.b. Ceftazidime 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01560 and CA264_01565 are separated by 330 nucleotides CA264_01565 and CA264_01570 are separated by 223 nucleotides CA264_01570 and CA264_01575 are separated by 17 nucleotides
CA264_01560: CA264_01560 - hypothetical protein, at 368,312 to 369,418
_01560
CA264_01565: CA264_01565 - tellurium resistance protein TerC, at 369,749 to 370,690
_01565
CA264_01570: CA264_01570 - dolichyl-phosphate beta-D-mannosyltransferase, at 370,914 to 371,648
_01570
CA264_01575: CA264_01575 - protoporphyrinogen oxidase, at 371,666 to 373,012
_01575
Position (kb) 369
370
371 Strain fitness (log2 ratio) -2
-1
0
1
2 at 369.174 kb on - strand, within CA264_01560 at 369.174 kb on - strand, within CA264_01560 at 369.182 kb on - strand, within CA264_01560 at 369.389 kb on + strand at 369.454 kb on + strand at 369.476 kb on + strand at 369.526 kb on + strand at 369.526 kb on + strand at 369.526 kb on + strand at 369.528 kb on + strand at 369.528 kb on + strand at 369.528 kb on + strand at 369.530 kb on + strand at 369.531 kb on - strand at 369.531 kb on - strand at 369.531 kb on - strand at 369.533 kb on + strand at 369.534 kb on - strand at 369.534 kb on - strand at 369.555 kb on + strand at 369.556 kb on - strand at 369.616 kb on + strand at 369.617 kb on - strand at 369.623 kb on - strand at 369.623 kb on - strand at 369.623 kb on - strand at 369.623 kb on - strand at 369.652 kb on + strand at 369.670 kb on + strand at 369.670 kb on + strand at 369.671 kb on - strand at 369.671 kb on - strand at 369.713 kb on - strand at 369.738 kb on + strand at 369.751 kb on - strand at 369.787 kb on + strand at 369.866 kb on + strand, within CA264_01565 at 369.908 kb on + strand, within CA264_01565 at 369.909 kb on - strand, within CA264_01565 at 369.910 kb on + strand, within CA264_01565 at 369.910 kb on + strand, within CA264_01565 at 369.949 kb on + strand, within CA264_01565 at 369.969 kb on + strand, within CA264_01565 at 369.969 kb on + strand, within CA264_01565 at 369.969 kb on + strand, within CA264_01565 at 370.011 kb on + strand, within CA264_01565 at 370.226 kb on + strand, within CA264_01565 at 370.267 kb on + strand, within CA264_01565 at 370.268 kb on - strand, within CA264_01565 at 370.293 kb on + strand, within CA264_01565 at 370.293 kb on + strand, within CA264_01565 at 370.294 kb on - strand, within CA264_01565 at 370.300 kb on + strand, within CA264_01565 at 370.300 kb on + strand, within CA264_01565 at 370.300 kb on + strand, within CA264_01565 at 370.301 kb on - strand, within CA264_01565 at 370.301 kb on - strand, within CA264_01565 at 370.325 kb on + strand, within CA264_01565 at 370.325 kb on + strand, within CA264_01565 at 370.332 kb on - strand, within CA264_01565 at 370.338 kb on - strand, within CA264_01565 at 370.454 kb on + strand, within CA264_01565 at 370.691 kb on - strand at 370.734 kb on + strand at 370.734 kb on + strand at 370.734 kb on + strand at 370.735 kb on - strand at 370.735 kb on - strand at 370.737 kb on - strand at 370.737 kb on - strand at 370.737 kb on - strand at 370.737 kb on - strand at 370.737 kb on - strand at 370.739 kb on + strand at 370.740 kb on - strand at 370.740 kb on - strand at 370.760 kb on - strand at 370.900 kb on + strand at 370.900 kb on + strand at 370.916 kb on - strand at 371.657 kb on + strand at 371.658 kb on - strand at 371.663 kb on + strand at 371.664 kb on - strand at 371.672 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.001 mg/ml remove 369,174 - CA264_01560 0.78 +0.5 369,174 - CA264_01560 0.78 -0.2 369,182 - CA264_01560 0.79 -0.2 369,389 + -0.5 369,454 + -0.8 369,476 + +0.1 369,526 + -0.3 369,526 + +0.0 369,526 + -0.3 369,528 + -0.2 369,528 + +0.2 369,528 + -0.2 369,530 + +0.3 369,531 - -0.7 369,531 - -0.2 369,531 - -0.6 369,533 + -1.5 369,534 - -1.0 369,534 - +0.7 369,555 + -0.5 369,556 - +0.8 369,616 + -0.9 369,617 - +0.2 369,623 - -0.5 369,623 - -0.4 369,623 - -0.8 369,623 - -0.0 369,652 + -0.0 369,670 + -0.2 369,670 + -0.2 369,671 - -0.8 369,671 - +0.2 369,713 - -1.4 369,738 + -0.4 369,751 - +0.2 369,787 + +0.4 369,866 + CA264_01565 0.12 +0.1 369,908 + CA264_01565 0.17 -0.3 369,909 - CA264_01565 0.17 -0.7 369,910 + CA264_01565 0.17 +0.9 369,910 + CA264_01565 0.17 -0.3 369,949 + CA264_01565 0.21 -0.5 369,969 + CA264_01565 0.23 -0.8 369,969 + CA264_01565 0.23 +0.5 369,969 + CA264_01565 0.23 -1.8 370,011 + CA264_01565 0.28 +0.7 370,226 + CA264_01565 0.51 +0.2 370,267 + CA264_01565 0.55 -0.3 370,268 - CA264_01565 0.55 -0.1 370,293 + CA264_01565 0.58 -0.5 370,293 + CA264_01565 0.58 -0.3 370,294 - CA264_01565 0.58 -0.2 370,300 + CA264_01565 0.58 +0.1 370,300 + CA264_01565 0.58 +0.7 370,300 + CA264_01565 0.58 -1.4 370,301 - CA264_01565 0.59 +0.2 370,301 - CA264_01565 0.59 -0.2 370,325 + CA264_01565 0.61 -1.7 370,325 + CA264_01565 0.61 +2.0 370,332 - CA264_01565 0.62 +0.0 370,338 - CA264_01565 0.63 -0.4 370,454 + CA264_01565 0.75 -0.7 370,691 - -0.2 370,734 + -1.6 370,734 + -0.2 370,734 + -1.4 370,735 - -0.0 370,735 - -0.1 370,737 - -1.1 370,737 - -0.3 370,737 - +0.1 370,737 - +0.3 370,737 - +0.1 370,739 + +0.3 370,740 - -0.0 370,740 - -0.3 370,760 - -0.1 370,900 + -1.0 370,900 + -1.6 370,916 - -2.0 371,657 + -0.6 371,658 - +0.9 371,663 + -0.3 371,664 - -0.6 371,672 - -1.5
Or see this region's nucleotide sequence