Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2170 and Echvi_2171 are separated by 16 nucleotides Echvi_2171 and Echvi_2172 are separated by 111 nucleotides
Echvi_2170: Echvi_2170 - TonB-linked outer membrane protein, SusC/RagA family, at 2,588,915 to 2,592,397
_2170
Echvi_2171: Echvi_2171 - SusD family., at 2,592,414 to 2,594,174
_2171
Echvi_2172: Echvi_2172 - Arylsulfatase A and related enzymes, at 2,594,286 to 2,595,827
_2172
Position (kb)
2592
2593
2594
2595 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2591.426 kb on + strand, within Echvi_2170 at 2591.427 kb on - strand, within Echvi_2170 at 2591.427 kb on - strand, within Echvi_2170 at 2591.469 kb on + strand, within Echvi_2170 at 2591.476 kb on + strand, within Echvi_2170 at 2591.557 kb on + strand, within Echvi_2170 at 2591.581 kb on + strand, within Echvi_2170 at 2591.581 kb on + strand, within Echvi_2170 at 2591.596 kb on - strand, within Echvi_2170 at 2591.596 kb on - strand, within Echvi_2170 at 2591.605 kb on + strand, within Echvi_2170 at 2591.615 kb on + strand, within Echvi_2170 at 2591.624 kb on + strand, within Echvi_2170 at 2591.624 kb on + strand, within Echvi_2170 at 2591.625 kb on - strand, within Echvi_2170 at 2591.625 kb on - strand, within Echvi_2170 at 2591.636 kb on - strand, within Echvi_2170 at 2591.708 kb on + strand, within Echvi_2170 at 2591.710 kb on + strand, within Echvi_2170 at 2591.710 kb on + strand, within Echvi_2170 at 2591.725 kb on - strand, within Echvi_2170 at 2591.753 kb on + strand, within Echvi_2170 at 2591.754 kb on - strand, within Echvi_2170 at 2591.762 kb on - strand, within Echvi_2170 at 2591.765 kb on + strand, within Echvi_2170 at 2591.765 kb on + strand, within Echvi_2170 at 2591.765 kb on + strand at 2591.766 kb on - strand, within Echvi_2170 at 2591.768 kb on - strand, within Echvi_2170 at 2591.768 kb on - strand, within Echvi_2170 at 2591.768 kb on - strand, within Echvi_2170 at 2591.894 kb on + strand, within Echvi_2170 at 2591.894 kb on + strand, within Echvi_2170 at 2591.894 kb on + strand, within Echvi_2170 at 2591.918 kb on + strand, within Echvi_2170 at 2591.918 kb on + strand, within Echvi_2170 at 2591.920 kb on + strand, within Echvi_2170 at 2591.930 kb on - strand, within Echvi_2170 at 2591.934 kb on + strand, within Echvi_2170 at 2591.979 kb on + strand, within Echvi_2170 at 2592.073 kb on - strand at 2592.080 kb on - strand at 2592.170 kb on + strand at 2592.170 kb on + strand at 2592.171 kb on - strand at 2592.171 kb on - strand at 2592.171 kb on - strand at 2592.171 kb on - strand at 2592.171 kb on - strand at 2592.171 kb on - strand at 2592.171 kb on - strand at 2592.172 kb on + strand at 2592.172 kb on + strand at 2592.200 kb on + strand at 2592.203 kb on - strand at 2592.252 kb on + strand at 2592.253 kb on - strand at 2592.253 kb on - strand at 2592.269 kb on - strand at 2592.269 kb on - strand at 2592.308 kb on - strand at 2592.387 kb on + strand at 2592.387 kb on + strand at 2592.396 kb on - strand at 2592.410 kb on - strand at 2592.546 kb on + strand at 2592.546 kb on + strand at 2592.547 kb on - strand at 2592.571 kb on + strand at 2592.572 kb on - strand at 2592.572 kb on - strand at 2592.578 kb on + strand at 2592.603 kb on + strand, within Echvi_2171 at 2592.604 kb on - strand, within Echvi_2171 at 2592.605 kb on + strand, within Echvi_2171 at 2592.606 kb on - strand, within Echvi_2171 at 2592.606 kb on - strand, within Echvi_2171 at 2592.606 kb on - strand, within Echvi_2171 at 2592.671 kb on + strand, within Echvi_2171 at 2592.674 kb on + strand, within Echvi_2171 at 2592.674 kb on + strand, within Echvi_2171 at 2592.674 kb on + strand, within Echvi_2171 at 2592.675 kb on - strand, within Echvi_2171 at 2592.675 kb on - strand, within Echvi_2171 at 2592.675 kb on - strand, within Echvi_2171 at 2592.675 kb on - strand, within Echvi_2171 at 2592.726 kb on + strand, within Echvi_2171 at 2592.727 kb on - strand, within Echvi_2171 at 2592.727 kb on - strand, within Echvi_2171 at 2592.737 kb on + strand, within Echvi_2171 at 2592.737 kb on + strand, within Echvi_2171 at 2592.756 kb on + strand, within Echvi_2171 at 2592.756 kb on + strand, within Echvi_2171 at 2592.801 kb on + strand, within Echvi_2171 at 2592.801 kb on + strand, within Echvi_2171 at 2592.849 kb on + strand, within Echvi_2171 at 2592.880 kb on + strand, within Echvi_2171 at 2592.908 kb on - strand, within Echvi_2171 at 2592.908 kb on - strand, within Echvi_2171 at 2592.930 kb on + strand, within Echvi_2171 at 2592.930 kb on + strand, within Echvi_2171 at 2592.939 kb on - strand, within Echvi_2171 at 2593.027 kb on + strand, within Echvi_2171 at 2593.028 kb on - strand, within Echvi_2171 at 2593.060 kb on + strand, within Echvi_2171 at 2593.092 kb on - strand, within Echvi_2171 at 2593.092 kb on - strand, within Echvi_2171 at 2593.092 kb on - strand, within Echvi_2171 at 2593.111 kb on + strand, within Echvi_2171 at 2593.158 kb on + strand, within Echvi_2171 at 2593.173 kb on + strand, within Echvi_2171 at 2593.173 kb on + strand, within Echvi_2171 at 2593.173 kb on + strand, within Echvi_2171 at 2593.174 kb on - strand, within Echvi_2171 at 2593.174 kb on - strand, within Echvi_2171 at 2593.174 kb on - strand, within Echvi_2171 at 2593.240 kb on + strand, within Echvi_2171 at 2593.240 kb on + strand, within Echvi_2171 at 2593.241 kb on - strand, within Echvi_2171 at 2593.249 kb on - strand, within Echvi_2171 at 2593.274 kb on + strand, within Echvi_2171 at 2593.310 kb on + strand, within Echvi_2171 at 2593.311 kb on - strand, within Echvi_2171 at 2593.427 kb on + strand, within Echvi_2171 at 2593.428 kb on - strand, within Echvi_2171 at 2593.428 kb on - strand, within Echvi_2171 at 2593.472 kb on + strand, within Echvi_2171 at 2593.472 kb on + strand, within Echvi_2171 at 2593.473 kb on - strand, within Echvi_2171 at 2593.473 kb on - strand, within Echvi_2171 at 2593.473 kb on - strand, within Echvi_2171 at 2593.503 kb on - strand, within Echvi_2171 at 2593.503 kb on - strand, within Echvi_2171 at 2593.528 kb on + strand, within Echvi_2171 at 2593.566 kb on + strand, within Echvi_2171 at 2593.681 kb on + strand, within Echvi_2171 at 2593.699 kb on + strand, within Echvi_2171 at 2593.792 kb on + strand, within Echvi_2171 at 2593.827 kb on - strand, within Echvi_2171 at 2593.885 kb on - strand, within Echvi_2171 at 2593.902 kb on + strand, within Echvi_2171 at 2593.903 kb on - strand, within Echvi_2171 at 2593.909 kb on + strand, within Echvi_2171 at 2593.909 kb on + strand, within Echvi_2171 at 2593.910 kb on - strand, within Echvi_2171 at 2593.910 kb on - strand, within Echvi_2171 at 2593.966 kb on + strand, within Echvi_2171 at 2593.990 kb on - strand, within Echvi_2171 at 2594.002 kb on + strand at 2594.003 kb on - strand at 2594.003 kb on - strand at 2594.018 kb on - strand at 2594.025 kb on - strand at 2594.029 kb on - strand at 2594.046 kb on - strand at 2594.049 kb on + strand at 2594.057 kb on + strand at 2594.058 kb on - strand at 2594.110 kb on - strand at 2594.169 kb on + strand at 2594.173 kb on - strand at 2594.180 kb on + strand at 2594.180 kb on + strand at 2594.181 kb on - strand at 2594.298 kb on + strand at 2594.299 kb on - strand at 2594.299 kb on - strand at 2594.301 kb on + strand at 2594.323 kb on + strand at 2594.327 kb on - strand at 2594.402 kb on + strand at 2594.419 kb on + strand at 2594.419 kb on + strand at 2594.442 kb on + strand, within Echvi_2172 at 2594.443 kb on - strand, within Echvi_2172 at 2594.469 kb on - strand, within Echvi_2172 at 2594.512 kb on - strand, within Echvi_2172 at 2594.512 kb on - strand, within Echvi_2172 at 2594.566 kb on - strand, within Echvi_2172 at 2594.566 kb on - strand, within Echvi_2172 at 2594.761 kb on + strand, within Echvi_2172 at 2594.762 kb on - strand, within Echvi_2172 at 2594.781 kb on - strand, within Echvi_2172 at 2594.801 kb on + strand, within Echvi_2172 at 2594.869 kb on + strand, within Echvi_2172 at 2594.870 kb on - strand, within Echvi_2172 at 2594.962 kb on + strand, within Echvi_2172 at 2594.962 kb on + strand, within Echvi_2172 at 2594.963 kb on - strand, within Echvi_2172 at 2594.984 kb on - strand, within Echvi_2172 at 2594.988 kb on + strand, within Echvi_2172 at 2594.988 kb on + strand, within Echvi_2172 at 2594.988 kb on + strand, within Echvi_2172 at 2594.988 kb on + strand, within Echvi_2172 at 2594.989 kb on - strand, within Echvi_2172 at 2594.989 kb on - strand, within Echvi_2172 at 2594.989 kb on - strand, within Echvi_2172 at 2594.989 kb on - strand, within Echvi_2172 at 2594.989 kb on - strand, within Echvi_2172 at 2594.990 kb on + strand, within Echvi_2172 at 2594.990 kb on + strand, within Echvi_2172 at 2594.990 kb on + strand, within Echvi_2172 at 2594.990 kb on + strand, within Echvi_2172 at 2594.991 kb on - strand, within Echvi_2172 at 2594.991 kb on - strand, within Echvi_2172 at 2595.013 kb on + strand, within Echvi_2172 at 2595.066 kb on - strand, within Echvi_2172 at 2595.155 kb on + strand, within Echvi_2172 at 2595.156 kb on - strand, within Echvi_2172
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,591,426 + Echvi_2170 0.72 -1.0 2,591,427 - Echvi_2170 0.72 +0.1 2,591,427 - Echvi_2170 0.72 -0.9 2,591,469 + Echvi_2170 0.73 +0.9 2,591,476 + Echvi_2170 0.74 +0.7 2,591,557 + Echvi_2170 0.76 +0.6 2,591,581 + Echvi_2170 0.77 +0.3 2,591,581 + Echvi_2170 0.77 +0.3 2,591,596 - Echvi_2170 0.77 +0.4 2,591,596 - Echvi_2170 0.77 -0.2 2,591,605 + Echvi_2170 0.77 +0.1 2,591,615 + Echvi_2170 0.78 -0.5 2,591,624 + Echvi_2170 0.78 -2.2 2,591,624 + Echvi_2170 0.78 -0.3 2,591,625 - Echvi_2170 0.78 -3.2 2,591,625 - Echvi_2170 0.78 +0.2 2,591,636 - Echvi_2170 0.78 -0.9 2,591,708 + Echvi_2170 0.80 -0.6 2,591,710 + Echvi_2170 0.80 -0.6 2,591,710 + Echvi_2170 0.80 -0.0 2,591,725 - Echvi_2170 0.81 -1.1 2,591,753 + Echvi_2170 0.81 +0.5 2,591,754 - Echvi_2170 0.82 -0.5 2,591,762 - Echvi_2170 0.82 +0.6 2,591,765 + Echvi_2170 0.82 +0.2 2,591,765 + Echvi_2170 0.82 +0.7 2,591,765 + +1.1 2,591,766 - Echvi_2170 0.82 +0.8 2,591,768 - Echvi_2170 0.82 +0.1 2,591,768 - Echvi_2170 0.82 -0.8 2,591,768 - Echvi_2170 0.82 -0.3 2,591,894 + Echvi_2170 0.86 -0.0 2,591,894 + Echvi_2170 0.86 +0.4 2,591,894 + Echvi_2170 0.86 -0.3 2,591,918 + Echvi_2170 0.86 +0.8 2,591,918 + Echvi_2170 0.86 -0.2 2,591,920 + Echvi_2170 0.86 -0.6 2,591,930 - Echvi_2170 0.87 +0.5 2,591,934 + Echvi_2170 0.87 +1.9 2,591,979 + Echvi_2170 0.88 -0.8 2,592,073 - -0.3 2,592,080 - -0.6 2,592,170 + -0.4 2,592,170 + +1.1 2,592,171 - +0.1 2,592,171 - -1.6 2,592,171 - -0.3 2,592,171 - -0.4 2,592,171 - -0.7 2,592,171 - -1.9 2,592,171 - +3.1 2,592,172 + -0.3 2,592,172 + +0.9 2,592,200 + -0.3 2,592,203 - +0.7 2,592,252 + -1.3 2,592,253 - -0.1 2,592,253 - -1.3 2,592,269 - +2.6 2,592,269 - +0.3 2,592,308 - +0.3 2,592,387 + +0.5 2,592,387 + +0.2 2,592,396 - -0.0 2,592,410 - -0.6 2,592,546 + +1.5 2,592,546 + -0.7 2,592,547 - -0.9 2,592,571 + +1.7 2,592,572 - +0.2 2,592,572 - -0.1 2,592,578 + +0.8 2,592,603 + Echvi_2171 0.11 -0.5 2,592,604 - Echvi_2171 0.11 -0.4 2,592,605 + Echvi_2171 0.11 +0.0 2,592,606 - Echvi_2171 0.11 +0.3 2,592,606 - Echvi_2171 0.11 -0.8 2,592,606 - Echvi_2171 0.11 -0.1 2,592,671 + Echvi_2171 0.15 -0.7 2,592,674 + Echvi_2171 0.15 -1.2 2,592,674 + Echvi_2171 0.15 +0.5 2,592,674 + Echvi_2171 0.15 -0.1 2,592,675 - Echvi_2171 0.15 +0.2 2,592,675 - Echvi_2171 0.15 -0.1 2,592,675 - Echvi_2171 0.15 +1.1 2,592,675 - Echvi_2171 0.15 +0.1 2,592,726 + Echvi_2171 0.18 +1.5 2,592,727 - Echvi_2171 0.18 +1.4 2,592,727 - Echvi_2171 0.18 +1.8 2,592,737 + Echvi_2171 0.18 -0.4 2,592,737 + Echvi_2171 0.18 +1.2 2,592,756 + Echvi_2171 0.19 +0.1 2,592,756 + Echvi_2171 0.19 +0.3 2,592,801 + Echvi_2171 0.22 +0.5 2,592,801 + Echvi_2171 0.22 -0.1 2,592,849 + Echvi_2171 0.25 -0.3 2,592,880 + Echvi_2171 0.26 -0.8 2,592,908 - Echvi_2171 0.28 +0.3 2,592,908 - Echvi_2171 0.28 -0.3 2,592,930 + Echvi_2171 0.29 +1.1 2,592,930 + Echvi_2171 0.29 +0.3 2,592,939 - Echvi_2171 0.30 -0.4 2,593,027 + Echvi_2171 0.35 +0.2 2,593,028 - Echvi_2171 0.35 +0.4 2,593,060 + Echvi_2171 0.37 -1.8 2,593,092 - Echvi_2171 0.39 -0.6 2,593,092 - Echvi_2171 0.39 +0.7 2,593,092 - Echvi_2171 0.39 -0.0 2,593,111 + Echvi_2171 0.40 -0.9 2,593,158 + Echvi_2171 0.42 -0.0 2,593,173 + Echvi_2171 0.43 +0.4 2,593,173 + Echvi_2171 0.43 +0.1 2,593,173 + Echvi_2171 0.43 -0.9 2,593,174 - Echvi_2171 0.43 +0.7 2,593,174 - Echvi_2171 0.43 -0.1 2,593,174 - Echvi_2171 0.43 +0.6 2,593,240 + Echvi_2171 0.47 -0.5 2,593,240 + Echvi_2171 0.47 +0.2 2,593,241 - Echvi_2171 0.47 -0.9 2,593,249 - Echvi_2171 0.47 +0.3 2,593,274 + Echvi_2171 0.49 -1.6 2,593,310 + Echvi_2171 0.51 +1.4 2,593,311 - Echvi_2171 0.51 +1.5 2,593,427 + Echvi_2171 0.58 +0.4 2,593,428 - Echvi_2171 0.58 +0.1 2,593,428 - Echvi_2171 0.58 +1.5 2,593,472 + Echvi_2171 0.60 +0.8 2,593,472 + Echvi_2171 0.60 +0.8 2,593,473 - Echvi_2171 0.60 -1.5 2,593,473 - Echvi_2171 0.60 +0.7 2,593,473 - Echvi_2171 0.60 -0.0 2,593,503 - Echvi_2171 0.62 +0.6 2,593,503 - Echvi_2171 0.62 +0.3 2,593,528 + Echvi_2171 0.63 -0.0 2,593,566 + Echvi_2171 0.65 +0.2 2,593,681 + Echvi_2171 0.72 -0.0 2,593,699 + Echvi_2171 0.73 +0.7 2,593,792 + Echvi_2171 0.78 -0.3 2,593,827 - Echvi_2171 0.80 +1.2 2,593,885 - Echvi_2171 0.84 +0.1 2,593,902 + Echvi_2171 0.84 +0.1 2,593,903 - Echvi_2171 0.85 -0.9 2,593,909 + Echvi_2171 0.85 +0.6 2,593,909 + Echvi_2171 0.85 +0.2 2,593,910 - Echvi_2171 0.85 -2.0 2,593,910 - Echvi_2171 0.85 -2.2 2,593,966 + Echvi_2171 0.88 +0.1 2,593,990 - Echvi_2171 0.89 +0.4 2,594,002 + +0.1 2,594,003 - +0.5 2,594,003 - +0.6 2,594,018 - -0.2 2,594,025 - -1.4 2,594,029 - +0.4 2,594,046 - -0.6 2,594,049 + -1.3 2,594,057 + +0.5 2,594,058 - -0.3 2,594,110 - +0.2 2,594,169 + +0.3 2,594,173 - -0.5 2,594,180 + -0.9 2,594,180 + -2.1 2,594,181 - +1.5 2,594,298 + +0.4 2,594,299 - +0.3 2,594,299 - +0.5 2,594,301 + -0.2 2,594,323 + +0.1 2,594,327 - -1.1 2,594,402 + +0.4 2,594,419 + -0.5 2,594,419 + +1.7 2,594,442 + Echvi_2172 0.10 -0.2 2,594,443 - Echvi_2172 0.10 -0.6 2,594,469 - Echvi_2172 0.12 +1.3 2,594,512 - Echvi_2172 0.15 -0.6 2,594,512 - Echvi_2172 0.15 +0.1 2,594,566 - Echvi_2172 0.18 -0.5 2,594,566 - Echvi_2172 0.18 -1.4 2,594,761 + Echvi_2172 0.31 -0.8 2,594,762 - Echvi_2172 0.31 -0.5 2,594,781 - Echvi_2172 0.32 -0.4 2,594,801 + Echvi_2172 0.33 +0.8 2,594,869 + Echvi_2172 0.38 +0.7 2,594,870 - Echvi_2172 0.38 -0.5 2,594,962 + Echvi_2172 0.44 -1.1 2,594,962 + Echvi_2172 0.44 +0.3 2,594,963 - Echvi_2172 0.44 -1.5 2,594,984 - Echvi_2172 0.45 -0.1 2,594,988 + Echvi_2172 0.46 -0.2 2,594,988 + Echvi_2172 0.46 -1.0 2,594,988 + Echvi_2172 0.46 -0.3 2,594,988 + Echvi_2172 0.46 +0.4 2,594,989 - Echvi_2172 0.46 +0.6 2,594,989 - Echvi_2172 0.46 +1.1 2,594,989 - Echvi_2172 0.46 +0.1 2,594,989 - Echvi_2172 0.46 +0.5 2,594,989 - Echvi_2172 0.46 -0.2 2,594,990 + Echvi_2172 0.46 -0.8 2,594,990 + Echvi_2172 0.46 -0.6 2,594,990 + Echvi_2172 0.46 +0.1 2,594,990 + Echvi_2172 0.46 +0.3 2,594,991 - Echvi_2172 0.46 -0.3 2,594,991 - Echvi_2172 0.46 +0.1 2,595,013 + Echvi_2172 0.47 +1.1 2,595,066 - Echvi_2172 0.51 -0.7 2,595,155 + Echvi_2172 0.56 +0.5 2,595,156 - Echvi_2172 0.56 +0.7
Or see this region's nucleotide sequence