Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2171

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2170 and Echvi_2171 are separated by 16 nucleotidesEchvi_2171 and Echvi_2172 are separated by 111 nucleotides Echvi_2170: Echvi_2170 - TonB-linked outer membrane protein, SusC/RagA family, at 2,588,915 to 2,592,397 _2170 Echvi_2171: Echvi_2171 - SusD family., at 2,592,414 to 2,594,174 _2171 Echvi_2172: Echvi_2172 - Arylsulfatase A and related enzymes, at 2,594,286 to 2,595,827 _2172 Position (kb) 2592 2593 2594 2595Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2591.426 kb on + strand, within Echvi_2170at 2591.427 kb on - strand, within Echvi_2170at 2591.427 kb on - strand, within Echvi_2170at 2591.469 kb on + strand, within Echvi_2170at 2591.476 kb on + strand, within Echvi_2170at 2591.557 kb on + strand, within Echvi_2170at 2591.581 kb on + strand, within Echvi_2170at 2591.581 kb on + strand, within Echvi_2170at 2591.596 kb on - strand, within Echvi_2170at 2591.596 kb on - strand, within Echvi_2170at 2591.605 kb on + strand, within Echvi_2170at 2591.615 kb on + strand, within Echvi_2170at 2591.624 kb on + strand, within Echvi_2170at 2591.624 kb on + strand, within Echvi_2170at 2591.625 kb on - strand, within Echvi_2170at 2591.625 kb on - strand, within Echvi_2170at 2591.636 kb on - strand, within Echvi_2170at 2591.708 kb on + strand, within Echvi_2170at 2591.710 kb on + strand, within Echvi_2170at 2591.710 kb on + strand, within Echvi_2170at 2591.725 kb on - strand, within Echvi_2170at 2591.753 kb on + strand, within Echvi_2170at 2591.754 kb on - strand, within Echvi_2170at 2591.762 kb on - strand, within Echvi_2170at 2591.765 kb on + strand, within Echvi_2170at 2591.765 kb on + strand, within Echvi_2170at 2591.765 kb on + strandat 2591.766 kb on - strand, within Echvi_2170at 2591.768 kb on - strand, within Echvi_2170at 2591.768 kb on - strand, within Echvi_2170at 2591.768 kb on - strand, within Echvi_2170at 2591.894 kb on + strand, within Echvi_2170at 2591.894 kb on + strand, within Echvi_2170at 2591.894 kb on + strand, within Echvi_2170at 2591.918 kb on + strand, within Echvi_2170at 2591.918 kb on + strand, within Echvi_2170at 2591.920 kb on + strand, within Echvi_2170at 2591.930 kb on - strand, within Echvi_2170at 2591.934 kb on + strand, within Echvi_2170at 2591.979 kb on + strand, within Echvi_2170at 2592.073 kb on - strandat 2592.080 kb on - strandat 2592.170 kb on + strandat 2592.170 kb on + strandat 2592.171 kb on - strandat 2592.171 kb on - strandat 2592.171 kb on - strandat 2592.171 kb on - strandat 2592.171 kb on - strandat 2592.171 kb on - strandat 2592.171 kb on - strandat 2592.172 kb on + strandat 2592.172 kb on + strandat 2592.200 kb on + strandat 2592.203 kb on - strandat 2592.252 kb on + strandat 2592.253 kb on - strandat 2592.253 kb on - strandat 2592.269 kb on - strandat 2592.269 kb on - strandat 2592.308 kb on - strandat 2592.387 kb on + strandat 2592.387 kb on + strandat 2592.396 kb on - strandat 2592.410 kb on - strandat 2592.546 kb on + strandat 2592.546 kb on + strandat 2592.547 kb on - strandat 2592.571 kb on + strandat 2592.572 kb on - strandat 2592.572 kb on - strandat 2592.578 kb on + strandat 2592.603 kb on + strand, within Echvi_2171at 2592.604 kb on - strand, within Echvi_2171at 2592.605 kb on + strand, within Echvi_2171at 2592.606 kb on - strand, within Echvi_2171at 2592.606 kb on - strand, within Echvi_2171at 2592.606 kb on - strand, within Echvi_2171at 2592.671 kb on + strand, within Echvi_2171at 2592.674 kb on + strand, within Echvi_2171at 2592.674 kb on + strand, within Echvi_2171at 2592.674 kb on + strand, within Echvi_2171at 2592.675 kb on - strand, within Echvi_2171at 2592.675 kb on - strand, within Echvi_2171at 2592.675 kb on - strand, within Echvi_2171at 2592.675 kb on - strand, within Echvi_2171at 2592.726 kb on + strand, within Echvi_2171at 2592.727 kb on - strand, within Echvi_2171at 2592.727 kb on - strand, within Echvi_2171at 2592.737 kb on + strand, within Echvi_2171at 2592.737 kb on + strand, within Echvi_2171at 2592.756 kb on + strand, within Echvi_2171at 2592.756 kb on + strand, within Echvi_2171at 2592.801 kb on + strand, within Echvi_2171at 2592.801 kb on + strand, within Echvi_2171at 2592.849 kb on + strand, within Echvi_2171at 2592.880 kb on + strand, within Echvi_2171at 2592.908 kb on - strand, within Echvi_2171at 2592.908 kb on - strand, within Echvi_2171at 2592.930 kb on + strand, within Echvi_2171at 2592.930 kb on + strand, within Echvi_2171at 2592.939 kb on - strand, within Echvi_2171at 2593.027 kb on + strand, within Echvi_2171at 2593.028 kb on - strand, within Echvi_2171at 2593.060 kb on + strand, within Echvi_2171at 2593.092 kb on - strand, within Echvi_2171at 2593.092 kb on - strand, within Echvi_2171at 2593.092 kb on - strand, within Echvi_2171at 2593.111 kb on + strand, within Echvi_2171at 2593.158 kb on + strand, within Echvi_2171at 2593.173 kb on + strand, within Echvi_2171at 2593.173 kb on + strand, within Echvi_2171at 2593.173 kb on + strand, within Echvi_2171at 2593.174 kb on - strand, within Echvi_2171at 2593.174 kb on - strand, within Echvi_2171at 2593.174 kb on - strand, within Echvi_2171at 2593.240 kb on + strand, within Echvi_2171at 2593.240 kb on + strand, within Echvi_2171at 2593.241 kb on - strand, within Echvi_2171at 2593.249 kb on - strand, within Echvi_2171at 2593.274 kb on + strand, within Echvi_2171at 2593.310 kb on + strand, within Echvi_2171at 2593.311 kb on - strand, within Echvi_2171at 2593.427 kb on + strand, within Echvi_2171at 2593.428 kb on - strand, within Echvi_2171at 2593.428 kb on - strand, within Echvi_2171at 2593.472 kb on + strand, within Echvi_2171at 2593.472 kb on + strand, within Echvi_2171at 2593.473 kb on - strand, within Echvi_2171at 2593.473 kb on - strand, within Echvi_2171at 2593.473 kb on - strand, within Echvi_2171at 2593.503 kb on - strand, within Echvi_2171at 2593.503 kb on - strand, within Echvi_2171at 2593.528 kb on + strand, within Echvi_2171at 2593.566 kb on + strand, within Echvi_2171at 2593.681 kb on + strand, within Echvi_2171at 2593.699 kb on + strand, within Echvi_2171at 2593.792 kb on + strand, within Echvi_2171at 2593.827 kb on - strand, within Echvi_2171at 2593.885 kb on - strand, within Echvi_2171at 2593.902 kb on + strand, within Echvi_2171at 2593.903 kb on - strand, within Echvi_2171at 2593.909 kb on + strand, within Echvi_2171at 2593.909 kb on + strand, within Echvi_2171at 2593.910 kb on - strand, within Echvi_2171at 2593.910 kb on - strand, within Echvi_2171at 2593.966 kb on + strand, within Echvi_2171at 2593.990 kb on - strand, within Echvi_2171at 2594.002 kb on + strandat 2594.003 kb on - strandat 2594.003 kb on - strandat 2594.018 kb on - strandat 2594.025 kb on - strandat 2594.029 kb on - strandat 2594.046 kb on - strandat 2594.049 kb on + strandat 2594.057 kb on + strandat 2594.058 kb on - strandat 2594.110 kb on - strandat 2594.169 kb on + strandat 2594.173 kb on - strandat 2594.180 kb on + strandat 2594.180 kb on + strandat 2594.181 kb on - strandat 2594.298 kb on + strandat 2594.299 kb on - strandat 2594.299 kb on - strandat 2594.301 kb on + strandat 2594.323 kb on + strandat 2594.327 kb on - strandat 2594.402 kb on + strandat 2594.419 kb on + strandat 2594.419 kb on + strandat 2594.442 kb on + strand, within Echvi_2172at 2594.443 kb on - strand, within Echvi_2172at 2594.469 kb on - strand, within Echvi_2172at 2594.512 kb on - strand, within Echvi_2172at 2594.512 kb on - strand, within Echvi_2172at 2594.566 kb on - strand, within Echvi_2172at 2594.566 kb on - strand, within Echvi_2172at 2594.761 kb on + strand, within Echvi_2172at 2594.762 kb on - strand, within Echvi_2172at 2594.781 kb on - strand, within Echvi_2172at 2594.801 kb on + strand, within Echvi_2172at 2594.869 kb on + strand, within Echvi_2172at 2594.870 kb on - strand, within Echvi_2172at 2594.962 kb on + strand, within Echvi_2172at 2594.962 kb on + strand, within Echvi_2172at 2594.963 kb on - strand, within Echvi_2172at 2594.984 kb on - strand, within Echvi_2172at 2594.988 kb on + strand, within Echvi_2172at 2594.988 kb on + strand, within Echvi_2172at 2594.988 kb on + strand, within Echvi_2172at 2594.988 kb on + strand, within Echvi_2172at 2594.989 kb on - strand, within Echvi_2172at 2594.989 kb on - strand, within Echvi_2172at 2594.989 kb on - strand, within Echvi_2172at 2594.989 kb on - strand, within Echvi_2172at 2594.989 kb on - strand, within Echvi_2172at 2594.990 kb on + strand, within Echvi_2172at 2594.990 kb on + strand, within Echvi_2172at 2594.990 kb on + strand, within Echvi_2172at 2594.990 kb on + strand, within Echvi_2172at 2594.991 kb on - strand, within Echvi_2172at 2594.991 kb on - strand, within Echvi_2172at 2595.013 kb on + strand, within Echvi_2172at 2595.066 kb on - strand, within Echvi_2172at 2595.155 kb on + strand, within Echvi_2172at 2595.156 kb on - strand, within Echvi_2172

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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2,591,426 + Echvi_2170 0.72 -1.0
2,591,427 - Echvi_2170 0.72 +0.1
2,591,427 - Echvi_2170 0.72 -0.9
2,591,469 + Echvi_2170 0.73 +0.9
2,591,476 + Echvi_2170 0.74 +0.7
2,591,557 + Echvi_2170 0.76 +0.6
2,591,581 + Echvi_2170 0.77 +0.3
2,591,581 + Echvi_2170 0.77 +0.3
2,591,596 - Echvi_2170 0.77 +0.4
2,591,596 - Echvi_2170 0.77 -0.2
2,591,605 + Echvi_2170 0.77 +0.1
2,591,615 + Echvi_2170 0.78 -0.5
2,591,624 + Echvi_2170 0.78 -2.2
2,591,624 + Echvi_2170 0.78 -0.3
2,591,625 - Echvi_2170 0.78 -3.2
2,591,625 - Echvi_2170 0.78 +0.2
2,591,636 - Echvi_2170 0.78 -0.9
2,591,708 + Echvi_2170 0.80 -0.6
2,591,710 + Echvi_2170 0.80 -0.6
2,591,710 + Echvi_2170 0.80 -0.0
2,591,725 - Echvi_2170 0.81 -1.1
2,591,753 + Echvi_2170 0.81 +0.5
2,591,754 - Echvi_2170 0.82 -0.5
2,591,762 - Echvi_2170 0.82 +0.6
2,591,765 + Echvi_2170 0.82 +0.2
2,591,765 + Echvi_2170 0.82 +0.7
2,591,765 + +1.1
2,591,766 - Echvi_2170 0.82 +0.8
2,591,768 - Echvi_2170 0.82 +0.1
2,591,768 - Echvi_2170 0.82 -0.8
2,591,768 - Echvi_2170 0.82 -0.3
2,591,894 + Echvi_2170 0.86 -0.0
2,591,894 + Echvi_2170 0.86 +0.4
2,591,894 + Echvi_2170 0.86 -0.3
2,591,918 + Echvi_2170 0.86 +0.8
2,591,918 + Echvi_2170 0.86 -0.2
2,591,920 + Echvi_2170 0.86 -0.6
2,591,930 - Echvi_2170 0.87 +0.5
2,591,934 + Echvi_2170 0.87 +1.9
2,591,979 + Echvi_2170 0.88 -0.8
2,592,073 - -0.3
2,592,080 - -0.6
2,592,170 + -0.4
2,592,170 + +1.1
2,592,171 - +0.1
2,592,171 - -1.6
2,592,171 - -0.3
2,592,171 - -0.4
2,592,171 - -0.7
2,592,171 - -1.9
2,592,171 - +3.1
2,592,172 + -0.3
2,592,172 + +0.9
2,592,200 + -0.3
2,592,203 - +0.7
2,592,252 + -1.3
2,592,253 - -0.1
2,592,253 - -1.3
2,592,269 - +2.6
2,592,269 - +0.3
2,592,308 - +0.3
2,592,387 + +0.5
2,592,387 + +0.2
2,592,396 - -0.0
2,592,410 - -0.6
2,592,546 + +1.5
2,592,546 + -0.7
2,592,547 - -0.9
2,592,571 + +1.7
2,592,572 - +0.2
2,592,572 - -0.1
2,592,578 + +0.8
2,592,603 + Echvi_2171 0.11 -0.5
2,592,604 - Echvi_2171 0.11 -0.4
2,592,605 + Echvi_2171 0.11 +0.0
2,592,606 - Echvi_2171 0.11 +0.3
2,592,606 - Echvi_2171 0.11 -0.8
2,592,606 - Echvi_2171 0.11 -0.1
2,592,671 + Echvi_2171 0.15 -0.7
2,592,674 + Echvi_2171 0.15 -1.2
2,592,674 + Echvi_2171 0.15 +0.5
2,592,674 + Echvi_2171 0.15 -0.1
2,592,675 - Echvi_2171 0.15 +0.2
2,592,675 - Echvi_2171 0.15 -0.1
2,592,675 - Echvi_2171 0.15 +1.1
2,592,675 - Echvi_2171 0.15 +0.1
2,592,726 + Echvi_2171 0.18 +1.5
2,592,727 - Echvi_2171 0.18 +1.4
2,592,727 - Echvi_2171 0.18 +1.8
2,592,737 + Echvi_2171 0.18 -0.4
2,592,737 + Echvi_2171 0.18 +1.2
2,592,756 + Echvi_2171 0.19 +0.1
2,592,756 + Echvi_2171 0.19 +0.3
2,592,801 + Echvi_2171 0.22 +0.5
2,592,801 + Echvi_2171 0.22 -0.1
2,592,849 + Echvi_2171 0.25 -0.3
2,592,880 + Echvi_2171 0.26 -0.8
2,592,908 - Echvi_2171 0.28 +0.3
2,592,908 - Echvi_2171 0.28 -0.3
2,592,930 + Echvi_2171 0.29 +1.1
2,592,930 + Echvi_2171 0.29 +0.3
2,592,939 - Echvi_2171 0.30 -0.4
2,593,027 + Echvi_2171 0.35 +0.2
2,593,028 - Echvi_2171 0.35 +0.4
2,593,060 + Echvi_2171 0.37 -1.8
2,593,092 - Echvi_2171 0.39 -0.6
2,593,092 - Echvi_2171 0.39 +0.7
2,593,092 - Echvi_2171 0.39 -0.0
2,593,111 + Echvi_2171 0.40 -0.9
2,593,158 + Echvi_2171 0.42 -0.0
2,593,173 + Echvi_2171 0.43 +0.4
2,593,173 + Echvi_2171 0.43 +0.1
2,593,173 + Echvi_2171 0.43 -0.9
2,593,174 - Echvi_2171 0.43 +0.7
2,593,174 - Echvi_2171 0.43 -0.1
2,593,174 - Echvi_2171 0.43 +0.6
2,593,240 + Echvi_2171 0.47 -0.5
2,593,240 + Echvi_2171 0.47 +0.2
2,593,241 - Echvi_2171 0.47 -0.9
2,593,249 - Echvi_2171 0.47 +0.3
2,593,274 + Echvi_2171 0.49 -1.6
2,593,310 + Echvi_2171 0.51 +1.4
2,593,311 - Echvi_2171 0.51 +1.5
2,593,427 + Echvi_2171 0.58 +0.4
2,593,428 - Echvi_2171 0.58 +0.1
2,593,428 - Echvi_2171 0.58 +1.5
2,593,472 + Echvi_2171 0.60 +0.8
2,593,472 + Echvi_2171 0.60 +0.8
2,593,473 - Echvi_2171 0.60 -1.5
2,593,473 - Echvi_2171 0.60 +0.7
2,593,473 - Echvi_2171 0.60 -0.0
2,593,503 - Echvi_2171 0.62 +0.6
2,593,503 - Echvi_2171 0.62 +0.3
2,593,528 + Echvi_2171 0.63 -0.0
2,593,566 + Echvi_2171 0.65 +0.2
2,593,681 + Echvi_2171 0.72 -0.0
2,593,699 + Echvi_2171 0.73 +0.7
2,593,792 + Echvi_2171 0.78 -0.3
2,593,827 - Echvi_2171 0.80 +1.2
2,593,885 - Echvi_2171 0.84 +0.1
2,593,902 + Echvi_2171 0.84 +0.1
2,593,903 - Echvi_2171 0.85 -0.9
2,593,909 + Echvi_2171 0.85 +0.6
2,593,909 + Echvi_2171 0.85 +0.2
2,593,910 - Echvi_2171 0.85 -2.0
2,593,910 - Echvi_2171 0.85 -2.2
2,593,966 + Echvi_2171 0.88 +0.1
2,593,990 - Echvi_2171 0.89 +0.4
2,594,002 + +0.1
2,594,003 - +0.5
2,594,003 - +0.6
2,594,018 - -0.2
2,594,025 - -1.4
2,594,029 - +0.4
2,594,046 - -0.6
2,594,049 + -1.3
2,594,057 + +0.5
2,594,058 - -0.3
2,594,110 - +0.2
2,594,169 + +0.3
2,594,173 - -0.5
2,594,180 + -0.9
2,594,180 + -2.1
2,594,181 - +1.5
2,594,298 + +0.4
2,594,299 - +0.3
2,594,299 - +0.5
2,594,301 + -0.2
2,594,323 + +0.1
2,594,327 - -1.1
2,594,402 + +0.4
2,594,419 + -0.5
2,594,419 + +1.7
2,594,442 + Echvi_2172 0.10 -0.2
2,594,443 - Echvi_2172 0.10 -0.6
2,594,469 - Echvi_2172 0.12 +1.3
2,594,512 - Echvi_2172 0.15 -0.6
2,594,512 - Echvi_2172 0.15 +0.1
2,594,566 - Echvi_2172 0.18 -0.5
2,594,566 - Echvi_2172 0.18 -1.4
2,594,761 + Echvi_2172 0.31 -0.8
2,594,762 - Echvi_2172 0.31 -0.5
2,594,781 - Echvi_2172 0.32 -0.4
2,594,801 + Echvi_2172 0.33 +0.8
2,594,869 + Echvi_2172 0.38 +0.7
2,594,870 - Echvi_2172 0.38 -0.5
2,594,962 + Echvi_2172 0.44 -1.1
2,594,962 + Echvi_2172 0.44 +0.3
2,594,963 - Echvi_2172 0.44 -1.5
2,594,984 - Echvi_2172 0.45 -0.1
2,594,988 + Echvi_2172 0.46 -0.2
2,594,988 + Echvi_2172 0.46 -1.0
2,594,988 + Echvi_2172 0.46 -0.3
2,594,988 + Echvi_2172 0.46 +0.4
2,594,989 - Echvi_2172 0.46 +0.6
2,594,989 - Echvi_2172 0.46 +1.1
2,594,989 - Echvi_2172 0.46 +0.1
2,594,989 - Echvi_2172 0.46 +0.5
2,594,989 - Echvi_2172 0.46 -0.2
2,594,990 + Echvi_2172 0.46 -0.8
2,594,990 + Echvi_2172 0.46 -0.6
2,594,990 + Echvi_2172 0.46 +0.1
2,594,990 + Echvi_2172 0.46 +0.3
2,594,991 - Echvi_2172 0.46 -0.3
2,594,991 - Echvi_2172 0.46 +0.1
2,595,013 + Echvi_2172 0.47 +1.1
2,595,066 - Echvi_2172 0.51 -0.7
2,595,155 + Echvi_2172 0.56 +0.5
2,595,156 - Echvi_2172 0.56 +0.7

Or see this region's nucleotide sequence