Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1685 and Echvi_1686 overlap by 11 nucleotides Echvi_1686 and Echvi_1687 are separated by 39 nucleotides
Echvi_1685: Echvi_1685 - ABC-type sugar transport system, periplasmic component, at 1,975,918 to 1,977,081
_1685
Echvi_1686: Echvi_1686 - Predicted acyl-CoA transferases/carnitine dehydratase, at 1,977,071 to 1,978,234
_1686
Echvi_1687: Echvi_1687 - Predicted acyl-CoA transferases/carnitine dehydratase, at 1,978,274 to 1,979,416
_1687
Position (kb)
1977
1978
1979 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1976.120 kb on + strand, within Echvi_1685 at 1976.121 kb on - strand, within Echvi_1685 at 1976.121 kb on - strand, within Echvi_1685 at 1976.207 kb on + strand, within Echvi_1685 at 1976.233 kb on + strand, within Echvi_1685 at 1976.233 kb on + strand, within Echvi_1685 at 1976.233 kb on + strand, within Echvi_1685 at 1976.472 kb on + strand, within Echvi_1685 at 1976.487 kb on - strand, within Echvi_1685 at 1976.523 kb on - strand, within Echvi_1685 at 1976.569 kb on + strand, within Echvi_1685 at 1976.569 kb on + strand, within Echvi_1685 at 1976.569 kb on + strand, within Echvi_1685 at 1976.569 kb on + strand, within Echvi_1685 at 1976.569 kb on + strand, within Echvi_1685 at 1976.570 kb on - strand, within Echvi_1685 at 1976.570 kb on - strand, within Echvi_1685 at 1976.590 kb on + strand, within Echvi_1685 at 1976.591 kb on - strand, within Echvi_1685 at 1976.627 kb on - strand, within Echvi_1685 at 1976.706 kb on + strand, within Echvi_1685 at 1976.752 kb on - strand, within Echvi_1685 at 1976.752 kb on - strand, within Echvi_1685 at 1976.752 kb on - strand, within Echvi_1685 at 1976.766 kb on - strand, within Echvi_1685 at 1976.812 kb on + strand, within Echvi_1685 at 1976.812 kb on + strand, within Echvi_1685 at 1976.812 kb on + strand, within Echvi_1685 at 1976.813 kb on - strand, within Echvi_1685 at 1976.813 kb on - strand, within Echvi_1685 at 1976.845 kb on - strand, within Echvi_1685 at 1976.913 kb on - strand, within Echvi_1685 at 1976.923 kb on + strand, within Echvi_1685 at 1976.924 kb on - strand, within Echvi_1685 at 1976.948 kb on - strand, within Echvi_1685 at 1976.948 kb on - strand, within Echvi_1685 at 1976.948 kb on - strand, within Echvi_1685 at 1976.990 kb on - strand at 1977.144 kb on - strand at 1977.144 kb on - strand at 1977.168 kb on + strand at 1977.169 kb on - strand at 1977.169 kb on - strand at 1977.311 kb on + strand, within Echvi_1686 at 1977.311 kb on + strand, within Echvi_1686 at 1977.312 kb on - strand, within Echvi_1686 at 1977.312 kb on - strand, within Echvi_1686 at 1977.438 kb on + strand, within Echvi_1686 at 1977.438 kb on + strand, within Echvi_1686 at 1977.464 kb on + strand, within Echvi_1686 at 1977.482 kb on + strand, within Echvi_1686 at 1977.508 kb on + strand, within Echvi_1686 at 1977.824 kb on + strand, within Echvi_1686 at 1977.865 kb on + strand, within Echvi_1686 at 1977.865 kb on + strand, within Echvi_1686 at 1977.865 kb on + strand, within Echvi_1686 at 1977.866 kb on - strand, within Echvi_1686 at 1977.867 kb on + strand, within Echvi_1686 at 1977.868 kb on - strand, within Echvi_1686 at 1977.868 kb on - strand, within Echvi_1686 at 1977.868 kb on - strand, within Echvi_1686 at 1977.868 kb on - strand, within Echvi_1686 at 1978.024 kb on - strand, within Echvi_1686 at 1978.024 kb on - strand, within Echvi_1686 at 1978.177 kb on + strand at 1978.217 kb on - strand at 1978.247 kb on - strand at 1978.251 kb on + strand at 1978.251 kb on + strand at 1978.252 kb on - strand at 1978.252 kb on - strand at 1978.252 kb on - strand at 1978.270 kb on - strand at 1978.284 kb on + strand at 1978.284 kb on + strand at 1978.294 kb on - strand at 1978.377 kb on + strand at 1978.399 kb on + strand, within Echvi_1687 at 1978.416 kb on - strand, within Echvi_1687 at 1978.464 kb on + strand, within Echvi_1687 at 1978.601 kb on + strand, within Echvi_1687 at 1978.602 kb on - strand, within Echvi_1687 at 1978.638 kb on - strand, within Echvi_1687 at 1978.698 kb on + strand, within Echvi_1687 at 1978.745 kb on + strand, within Echvi_1687 at 1978.863 kb on + strand, within Echvi_1687 at 1978.954 kb on + strand, within Echvi_1687 at 1978.955 kb on - strand, within Echvi_1687 at 1978.979 kb on - strand, within Echvi_1687 at 1979.000 kb on + strand, within Echvi_1687 at 1979.042 kb on - strand at 1979.162 kb on - strand, within Echvi_1687 at 1979.162 kb on - strand, within Echvi_1687 at 1979.162 kb on - strand, within Echvi_1687 at 1979.182 kb on + strand, within Echvi_1687 at 1979.182 kb on + strand, within Echvi_1687 at 1979.183 kb on - strand, within Echvi_1687 at 1979.185 kb on - strand, within Echvi_1687 at 1979.185 kb on - strand, within Echvi_1687 at 1979.185 kb on - strand, within Echvi_1687 at 1979.188 kb on - strand, within Echvi_1687 at 1979.188 kb on - strand, within Echvi_1687
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,976,120 + Echvi_1685 0.17 +0.1 1,976,121 - Echvi_1685 0.17 +0.2 1,976,121 - Echvi_1685 0.17 -0.9 1,976,207 + Echvi_1685 0.25 +0.1 1,976,233 + Echvi_1685 0.27 -0.7 1,976,233 + Echvi_1685 0.27 +2.1 1,976,233 + Echvi_1685 0.27 -0.1 1,976,472 + Echvi_1685 0.48 +0.5 1,976,487 - Echvi_1685 0.49 +0.0 1,976,523 - Echvi_1685 0.52 -0.1 1,976,569 + Echvi_1685 0.56 -0.3 1,976,569 + Echvi_1685 0.56 -0.3 1,976,569 + Echvi_1685 0.56 -1.4 1,976,569 + Echvi_1685 0.56 +0.1 1,976,569 + Echvi_1685 0.56 -2.1 1,976,570 - Echvi_1685 0.56 +1.4 1,976,570 - Echvi_1685 0.56 +1.1 1,976,590 + Echvi_1685 0.58 +0.0 1,976,591 - Echvi_1685 0.58 -0.3 1,976,627 - Echvi_1685 0.61 +1.2 1,976,706 + Echvi_1685 0.68 -0.3 1,976,752 - Echvi_1685 0.72 -0.4 1,976,752 - Echvi_1685 0.72 +0.2 1,976,752 - Echvi_1685 0.72 +0.7 1,976,766 - Echvi_1685 0.73 +0.3 1,976,812 + Echvi_1685 0.77 -0.0 1,976,812 + Echvi_1685 0.77 -0.3 1,976,812 + Echvi_1685 0.77 -0.2 1,976,813 - Echvi_1685 0.77 -0.2 1,976,813 - Echvi_1685 0.77 -0.1 1,976,845 - Echvi_1685 0.80 +0.1 1,976,913 - Echvi_1685 0.85 +0.1 1,976,923 + Echvi_1685 0.86 +0.8 1,976,924 - Echvi_1685 0.86 +0.5 1,976,948 - Echvi_1685 0.88 -0.4 1,976,948 - Echvi_1685 0.88 +1.4 1,976,948 - Echvi_1685 0.88 +0.1 1,976,990 - -0.5 1,977,144 - -0.9 1,977,144 - +0.5 1,977,168 + +0.1 1,977,169 - -0.3 1,977,169 - +0.4 1,977,311 + Echvi_1686 0.21 -0.6 1,977,311 + Echvi_1686 0.21 +1.7 1,977,312 - Echvi_1686 0.21 -1.5 1,977,312 - Echvi_1686 0.21 +0.8 1,977,438 + Echvi_1686 0.32 +0.7 1,977,438 + Echvi_1686 0.32 +0.1 1,977,464 + Echvi_1686 0.34 +1.0 1,977,482 + Echvi_1686 0.35 +1.4 1,977,508 + Echvi_1686 0.38 +0.7 1,977,824 + Echvi_1686 0.65 +0.4 1,977,865 + Echvi_1686 0.68 +1.7 1,977,865 + Echvi_1686 0.68 +0.5 1,977,865 + Echvi_1686 0.68 +0.4 1,977,866 - Echvi_1686 0.68 +0.5 1,977,867 + Echvi_1686 0.68 +0.6 1,977,868 - Echvi_1686 0.68 -2.0 1,977,868 - Echvi_1686 0.68 +1.8 1,977,868 - Echvi_1686 0.68 -0.8 1,977,868 - Echvi_1686 0.68 -0.9 1,978,024 - Echvi_1686 0.82 +0.5 1,978,024 - Echvi_1686 0.82 -0.3 1,978,177 + +0.1 1,978,217 - +1.1 1,978,247 - -0.2 1,978,251 + +0.4 1,978,251 + -1.9 1,978,252 - +0.5 1,978,252 - -0.1 1,978,252 - +0.3 1,978,270 - -0.6 1,978,284 + -0.3 1,978,284 + -1.2 1,978,294 - -0.2 1,978,377 + +0.5 1,978,399 + Echvi_1687 0.11 -1.7 1,978,416 - Echvi_1687 0.12 -0.2 1,978,464 + Echvi_1687 0.17 -0.6 1,978,601 + Echvi_1687 0.29 -0.8 1,978,602 - Echvi_1687 0.29 +0.1 1,978,638 - Echvi_1687 0.32 +0.8 1,978,698 + Echvi_1687 0.37 +0.3 1,978,745 + Echvi_1687 0.41 -0.2 1,978,863 + Echvi_1687 0.52 +0.0 1,978,954 + Echvi_1687 0.59 +0.9 1,978,955 - Echvi_1687 0.60 -0.3 1,978,979 - Echvi_1687 0.62 +0.5 1,979,000 + Echvi_1687 0.64 +1.1 1,979,042 - +3.1 1,979,162 - Echvi_1687 0.78 +1.6 1,979,162 - Echvi_1687 0.78 -0.7 1,979,162 - Echvi_1687 0.78 -0.3 1,979,182 + Echvi_1687 0.79 +0.1 1,979,182 + Echvi_1687 0.79 +0.9 1,979,183 - Echvi_1687 0.80 -2.1 1,979,185 - Echvi_1687 0.80 -0.7 1,979,185 - Echvi_1687 0.80 +0.4 1,979,185 - Echvi_1687 0.80 -0.5 1,979,188 - Echvi_1687 0.80 -0.5 1,979,188 - Echvi_1687 0.80 +0.9
Or see this region's nucleotide sequence